mRNA_M-pyrifera_M_contig1286.5743.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.760e-50 Identity = 97/172 (56.40%), Postives = 115/172 (66.86%), Query Frame = 3
Query: 162 DIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIVDLV 677
D FG IA +LMEER L A E+E A + + + AL VYGP VA G D VVEL+VRG RMTTLRSTLQAC SALA +FN+D+WP TDKD DEQGRRLI+C+P F K+LDVLRMRKRA+W + E + V ++ AD AF VN YFPG E FI D+V
Sbjct: 380 DAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRELAH-----VRVDAADRPAFDSFVNMYFPGFENFITDMV 546
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.880e-48 Identity = 94/164 (57.32%), Postives = 114/164 (69.51%), Query Frame = 3
Query: 186 IALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIVDLV 677
IA +LMEER L A E+E A + + + AL VYGP VA G D VVEL+VRG RMTTLRSTL+AC SALA +FN+D+WPATDKD DEQGRRLI+C+P F K+LDVLRMRKRA+W + ES + V ++ AD AF VN +FPG E FI D+V
Sbjct: 366 IAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRESAH-----VRVDAADRPAFDSFVNMFFPGFENFITDMV 524
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 174 bits (442), Expect = 4.360e-48 Identity = 93/182 (51.10%), Postives = 117/182 (64.29%), Query Frame = 3
Query: 144 PSELAYDIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGE-GESGNSGSGA---VFINEADADAFGEAVNRYFPGCERFIVDLV 677
P + A D+R FG+ +A SLMEE +L A E+ A+ R A+ VYGP VA G +D+VVELNVRG RMTTLRSTL+ CP SALA FN+++WP +KD D GRR+IDC P+ FSK+LDVLR+ KRA+W R E G N V I D AF E V+ YFP CE F+++ V
Sbjct: 337 PVKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMMEHV 518
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 169 bits (427), Expect = 8.390e-46 Identity = 95/191 (49.74%), Postives = 125/191 (65.45%), Query Frame = 3
Query: 126 DAQSLWPSELAYDIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIR----MTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLI-DCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGA-VFINEADADAFGEAVNRYFPGCERFIVDLVR 680
+A ++ E D+ FG +IA SL +ERA L A +E+ A + ++ AL VYGP AAG +D +VEL+VRG R MTTL STLQACP SALA F++ +WP T+KDKD GRR++ DC+P+ FSK+LDVLRM+KR +W G+ G G+ V I +AD F E VN YFPGCE FI+D V+
Sbjct: 344 EASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWA---GDDGKMGAAVLVAIKDADRAPFEEFVNMYFPGCESFIMDSVK 531
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.110e-44 Identity = 90/175 (51.43%), Postives = 112/175 (64.00%), Query Frame = 3
Query: 144 PSELAYDIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIV 668
P + D+ FG+ IA SLME VL A E+ A+ R + AL VYGP VA+G+Q++VVEL+VRG MTTLRSTL+ CP SALA F++ +WPA KD D GRR+IDC P FSK+LDVLR+ KRA+W GE G + V I D AF E V+ YF GCE FI+
Sbjct: 394 PVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKET-RVTIKPGDRVAFEEFVDMYFKGCESFIM 567
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 154 bits (390), Expect = 4.580e-44 Identity = 81/159 (50.94%), Postives = 101/159 (63.52%), Query Frame = 3
Query: 201 MEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIVDLV 677
ME VL A E+ A+ R + AL VYGP VA G++++VVEL+VRG M TLRSTL+ CP SALA F++D+WPA KD D GRR+IDC P+ FSK+LDVLRM KR W E G + + V I D AF E V+ YF GCE FI++ V
Sbjct: 1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKGCESFIMEHV 159
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 159 bits (403), Expect = 2.090e-42 Identity = 90/178 (50.56%), Postives = 117/178 (65.73%), Query Frame = 3
Query: 162 DIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIR----MTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLI-DCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIVDLVR 680
D+ FG +IA SL +ERA L A +E+ A + +V AL VYGP++AAG +D VVEL+VRG R MTTL STLQACP SALA F++ +WP TDK+KD GRR+I DC+P F+K+LDVLRM+KR +W + + + V I AD F + VN YFP CE FI+D V+
Sbjct: 348 DVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWA--DDDKKVRAAVLVAIKAADRAPFEKFVNMYFPACESFIMDSVK 523
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7FSV1_ECTSI (Potassium channel tetramerisation domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV1_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.160e-40 Identity = 88/185 (47.57%), Postives = 112/185 (60.54%), Query Frame = 3
Query: 144 PSELAYDIRPFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGA----VFINEADADAFGEAVNRYFPGCERFIVDLVRSV 686
PS L DI P +T L + L +E A S A+ AL VYGP +A+G++D VVEL+VRG+RMTTLRSTL ACP S T FN + W T+KD D+ GRR++DC P F+K+LDVLRM+K A W E ++G G A V + AD E N+YFPGCERFI+DLV +
Sbjct: 142 PSLLGDDI-PAHDTAYLEYISHARGL----REARAKPKMASAALEALTNVYGPDIASGKKDEVVELSVRGVRMTTLRSTLTACPDSVFTTWFNGN-WKPTEKDLDKHGRRMLDCKPAVFAKVLDVLRMKKWAGWAPSE-DAGGGGVVAKPVPVAVRPADRACLEELGNKYFPGCERFIMDLVEEL 319
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: D7FIX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX5_ECTSI) HSP 1 Score: 148 bits (374), Expect = 3.530e-39 Identity = 86/172 (50.00%), Postives = 106/172 (61.63%), Query Frame = 3
Query: 174 FGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAGEQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSG---AVFINEADADAFGEAVNRYFPGCERFIVDLVR 680
FGE+IA LMEE L A E++ A R T AL +YGP VA GE+D VVELNVRG +TTL TL AC S A + RW K DE GR ++C+P+CFSKILDV+RMRKRA W + N+G G V ++EAD + F +AV YFP C RF++DLVR
Sbjct: 222 FGESIADLLMEELMALAYARVELDEAAARARTVARALCVIYGPHVARGEEDPVVELNVRGRSITTLYWTLHACTDSVFAAWLAE-RWSGG-KGVDEDGRYKVNCDPSCFSKILDVMRMRKRAGWAEDDEIVKNAGGGDTIRVRVSEADRENFEDAVKMYFPNCTRFVMDLVR 391
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 147 bits (370), Expect = 4.800e-38 Identity = 83/173 (47.98%), Postives = 108/173 (62.43%), Query Frame = 3
Query: 171 PFGETIALSLMEERAVLDLAVKEMEAARVRVSTAVGALETVYGPSVAAG-EQDNVVELNVRGIRMTTLRSTLQACPCSALATMFNDDRWPATDKDKDEQGRRLIDCNPTCFSKILDVLRMRKRASWERGEGESGNSGSGAVFINEADADAFGEAVNRYFPGCERFIVDLVRSV 686
PFG IA +LMEE VL A E+ A R + AL VYGP VA G E+++VVEL+V G R+T + STL+ CP S AT F +DRWPAT KD D+ GRR+IDC P+ FSK++D+LR ASW RG+ + + + V I D F E V+ YF GCE I++ V S+
Sbjct: 292 PFGRLIADALMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYVESL 459 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1286.5743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1286.5743.1 >prot_M-pyrifera_M_contig1286.5743.1 ID=prot_M-pyrifera_M_contig1286.5743.1|Name=mRNA_M-pyrifera_M_contig1286.5743.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp MYQAHNHPNDAQSLWPSELAYDIRPFGETIALSLMEERAVLDLAVKEMEAback to top mRNA from alignment at M-pyrifera_M_contig1286:10356..11873+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1286.5743.1 ID=mRNA_M-pyrifera_M_contig1286.5743.1|Name=mRNA_M-pyrifera_M_contig1286.5743.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig1286:10356..11873+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1286:10356..11873+ >mRNA_M-pyrifera_M_contig1286.5743.1 ID=mRNA_M-pyrifera_M_contig1286.5743.1|Name=mRNA_M-pyrifera_M_contig1286.5743.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig1286:10356..11873+ (Macrocystis pyrifera P11B4 male)back to top |