mRNA_M-pyrifera_M_contig102653.571.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A359EK60_9GAMM (SSD domain-containing protein (Fragment) n=3 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359EK60_9GAMM) HSP 1 Score: 393 bits (1010), Expect = 2.790e-131 Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 657 QARITVRVKET EQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD Sbjct: 449 QARITVRVKETSEQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 667
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A2E7BZR0_9GAMM (SSD domain-containing protein n=10 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7BZR0_9GAMM) HSP 1 Score: 381 bits (978), Expect = 2.870e-124 Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 657 QARITVRVKET E+LRRDAFLSRLH+ELVEVTG+APERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFP DRNYVAAMYRCH SIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAM VAVIGALLLLP+LILLMRPLGPEAD Sbjct: 647 QARITVRVKETSEELRRDAFLSRLHSELVEVTGMAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPLDRNYVAAMYRCHRSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMTVAVIGALLLLPKLILLMRPLGPEAD 865
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A2N5Y671_9GAMM (SSD domain-containing protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y671_9GAMM) HSP 1 Score: 347 bits (891), Expect = 2.310e-111 Identity = 185/218 (84.86%), Postives = 207/218 (94.95%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEA 654 +ARITVRV ET E LRR+AFL RLH+ELVEVTGL PE+++FTGMLVLYNNVLQSLF+SQILTLG VF++I++MF+LLFRSLSLAFIALAPN++AAG+VLGVMGL GIPLDIMTITIAAIVVGIGVDDCIHYVHRF REFP+DRNY+A MYRCHGSIGRAMYYTT+TV+IGFSMLT+SNF PSIYFGLLTVLAMA AVIGALLLLPRLILL++PLGPEA Sbjct: 646 EARITVRVMETSENLRRNAFLERLHDELVEVTGLEPEQVQFTGMLVLYNNVLQSLFRSQILTLGVVFLSILVMFVLLFRSLSLAFIALAPNVLAAGLVLGVMGLVGIPLDIMTITIAAIVVGIGVDDCIHYVHRFMREFPKDRNYLATMYRCHGSIGRAMYYTTITVIIGFSMLTVSNFKPSIYFGLLTVLAMAAAVIGALLLLPRLILLVKPLGPEA 863
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A2D5FA64_9GAMM (SSD domain-containing protein n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FA64_9GAMM) HSP 1 Score: 342 bits (876), Expect = 5.040e-109 Identity = 187/217 (86.18%), Postives = 203/217 (93.55%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPE 651 QARITVRV ET E LRR+AFL RLH ELVEVTGLAP+ +RFTGMLVLYNNVLQSLF+SQILTLGAVF+AI++MFLLLFRSLSLA IALAPNI+AAG+VLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRF EFP+DR+Y+A M+RCH SIGRAMYYTT+TVVIGFSMLTLSNF PSIYFGLLTVLAM AV+GALLLLPRLILL+RPLGPE Sbjct: 665 QARITVRVMETSESLRRNAFLERLHAELVEVTGLAPDNVRFTGMLVLYNNVLQSLFRSQILTLGAVFLAILVMFLLLFRSLSLALIALAPNILAAGLVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFLHEFPKDRDYLATMHRCHFSIGRAMYYTTITVVIGFSMLTLSNFTPSIYFGLLTVLAMIAAVVGALLLLPRLILLVRPLGPE 881
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A6C0TYF5_9GAMM (MMPL family transporter n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0TYF5_9GAMM) HSP 1 Score: 341 bits (875), Expect = 5.630e-109 Identity = 186/217 (85.71%), Postives = 202/217 (93.09%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPE 651 QARITVRV ET E LRR+AFL RLH ELVE TGLAPE+IRFTGMLVLYNNVLQSLF+SQILTLG VF+AI +MFLLLFRSLSL+ IALAPN++AAG+VLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRF REFP+DRNY+A MYRCH SIGRAMYYTTVTVV+GFSMLT+SNF PSIYFGLLTVLAM VAV+GALLLLPRLI+L +PLGPE Sbjct: 656 QARITVRVMETSESLRRNAFLQRLHGELVEETGLAPEQIRFTGMLVLYNNVLQSLFRSQILTLGVVFVAIGIMFLLLFRSLSLSLIALAPNMLAAGLVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFMREFPKDRNYLATMYRCHRSIGRAMYYTTVTVVVGFSMLTVSNFTPSIYFGLLTVLAMTVAVLGALLLLPRLIVLCKPLGPE 872
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: UPI0019D3B7D4 (MMPL family transporter n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3B7D4) HSP 1 Score: 330 bits (846), Expect = 1.020e-104 Identity = 178/217 (82.03%), Postives = 200/217 (92.17%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPE 651 QARITVRV ET E LRRDAFL RLH +LV+ G+APE ++FTGMLVLYNNVLQSLF+SQILTLGAVF+AI++MF+LLFRSLSLA IALAPN++AAG+VLGVMGL GIPLDIMTITIAAIVVGIGVDDCIHYVHR+ REFP+DR+Y+A +YRCH SIGRAMYYTTVTVV+GFSMLTLSNFNPSIYFGLLTVLAM AV+GALLLLP LI+L +PLGPE Sbjct: 653 QARITVRVMETSETLRRDAFLKRLHADLVDTLGVAPEDVQFTGMLVLYNNVLQSLFRSQILTLGAVFLAILVMFVLLFRSLSLALIALAPNVLAAGLVLGVMGLLGIPLDIMTITIAAIVVGIGVDDCIHYVHRYLREFPKDRDYLATLYRCHRSIGRAMYYTTVTVVVGFSMLTLSNFNPSIYFGLLTVLAMIAAVLGALLLLPLLIILFKPLGPE 869
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A2N5X0E2_9GAMM (SSD domain-containing protein n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X0E2_9GAMM) HSP 1 Score: 326 bits (835), Expect = 3.860e-103 Identity = 176/219 (80.37%), Postives = 199/219 (90.87%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 657 +ARI VRVKET LRR+ FLS L + LVE GLA ER++FTGMLVLYNNVLQSLF+SQILTLGAVF+AI++MFL+LFRSLSLAFIALAPNI+AAG+VLGVMGL GIPLDIMTITIAAIVVGIGVDDCIHYVHR+ REFP+DR+Y AAMYRCH SIGRAMYYTT+T+V+GF LTLSNFNPSIYFGLLTVLAM AV+GALLLLP+LI++ +PLGPEAD Sbjct: 648 EARINVRVKETSRNLRRNQFLSDLRSHLVEEMGLAEERVQFTGMLVLYNNVLQSLFKSQILTLGAVFLAILVMFLILFRSLSLAFIALAPNILAAGLVLGVMGLVGIPLDIMTITIAAIVVGIGVDDCIHYVHRYLREFPKDRDYRAAMYRCHSSIGRAMYYTTLTIVVGFCTLTLSNFNPSIYFGLLTVLAMVAAVLGALLLLPQLIIIFKPLGPEAD 866
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A5C9A8Q6_9GAMM (MMPL family transporter n=2 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A8Q6_9GAMM) HSP 1 Score: 323 bits (829), Expect = 4.390e-102 Identity = 177/219 (80.82%), Postives = 195/219 (89.04%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 657 QARITVRVKET ++LRRDAFL RLH +LVE G+ P+ ++FTGMLVLYNNVLQSLF+SQILTLGAVF+AI+ MF+LLFRS SLA I LAPNI+AAGMVLG MGL GIPLDIMTITIAAIVVGIGVDDCIHYVHRF REF DRNY+A MYRCH SIGRAMYYTTVTVVIGF+MLTLSNFNPSIYFGLLTVLAM AV+GALLLLP L++L +PLGPE Sbjct: 668 QARITVRVKETSKELRRDAFLKRLHADLVETLGVEPDDVQFTGMLVLYNNVLQSLFRSQILTLGAVFLAILFMFVLLFRSFSLALITLAPNILAAGMVLGTMGLLGIPLDIMTITIAAIVVGIGVDDCIHYVHRFLREFEVDRNYLATMYRCHYSIGRAMYYTTVTVVIGFAMLTLSNFNPSIYFGLLTVLAMVAAVLGALLLLPLLMVLWKPLGPEGQ 886
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A4Z0LUA7_9GAMM (RND family transporter n=2 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0LUA7_9GAMM) HSP 1 Score: 323 bits (827), Expect = 5.280e-102 Identity = 175/216 (81.02%), Postives = 195/216 (90.28%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGP 648 QAR+ VRVKET LRRD FL +H LV+ +APER++ TGMLVLYN+VLQSLF+SQILTLGAVF+AI+ MFL+LFRS SLA IALAPN++AAG+VLGVMGL GIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNY+AAMYRCHGSIGRAMYYTT+TVVIGF+ LTLSNF PSIYFGLLTVLAM AV+GALLLLPRLIL++RPLGP Sbjct: 643 QARLNVRVKETSRSLRRDEFLREVHAHLVDEMQIAPERLQLTGMLVLYNDVLQSLFRSQILTLGAVFLAILAMFLVLFRSFSLAMIALAPNLLAAGLVLGVMGLVGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYLAAMYRCHGSIGRAMYYTTLTVVIGFTTLTLSNFTPSIYFGLLTVLAMVAAVLGALLLLPRLILVLRPLGP 858
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Match: A0A5P9NMN2_9GAMM (RND family transporter n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NMN2_9GAMM) HSP 1 Score: 322 bits (825), Expect = 9.410e-102 Identity = 174/219 (79.45%), Postives = 198/219 (90.41%), Query Frame = 1 Query: 1 QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNVLQSLFQSQILTLGAVFIAIMLMFLLLFRSLSLAFIALAPNIVAAGMVLGVMGLAGIPLDIMTITIAAIVVGIGVDDCIHYVHRFQREFPRDRNYVAAMYRCHGSIGRAMYYTTVTVVIGFSMLTLSNFNPSIYFGLLTVLAMAVAVIGALLLLPRLILLMRPLGPEAD 657 QAR++VRVKET E LRRD FL LH+ LV G+A E+++FTGMLVLYNNVLQSLF+SQILTLGAVF AI++MFLLLFRSLSLA IALAPN++AAG+VLGVMGL GIPLDIMTITIAAIVVGIGVDDCIHYVHR+ REF DR+Y AAM+RCHGSIGRAMYYTT+TVV+GFSMLTLSNFNPSIYFGLLTVLAM AV+GALLLLP+LI++ +PLGPE + Sbjct: 638 QARLSVRVKETSENLRRDQFLKNLHSHLVNDMGIAEEQVQFTGMLVLYNNVLQSLFRSQILTLGAVFTAILIMFLLLFRSLSLALIALAPNVLAAGLVLGVMGLLGIPLDIMTITIAAIVVGIGVDDCIHYVHRYMREFRVDRDYRAAMHRCHGSIGRAMYYTTLTVVVGFSMLTLSNFNPSIYFGLLTVLAMITAVLGALLLLPQLIIMFKPLGPEGE 856 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102653.571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102653.571.1 >prot_M-pyrifera_M_contig102653.571.1 ID=prot_M-pyrifera_M_contig102653.571.1|Name=mRNA_M-pyrifera_M_contig102653.571.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp QARITVRVKETREQLRRDAFLSRLHNELVEVTGLAPERIRFTGMLVLYNNback to top mRNA from alignment at M-pyrifera_M_contig102653:2..658- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102653.571.1 ID=mRNA_M-pyrifera_M_contig102653.571.1|Name=mRNA_M-pyrifera_M_contig102653.571.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig102653:2..658- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102653:2..658- >mRNA_M-pyrifera_M_contig102653.571.1 ID=mRNA_M-pyrifera_M_contig102653.571.1|Name=mRNA_M-pyrifera_M_contig102653.571.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig102653:2..658- (Macrocystis pyrifera P11B4 male)back to top |