mRNA_M-pyrifera_M_contig128332.5691.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A0P7ZCW4_9BACT (Ribonuclease VapC n=1 Tax=Bacteroidetes bacterium HLUCCA01 TaxID=1666909 RepID=A0A0P7ZCW4_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 9.210e-24 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSYT 392
M FLDTNICIHFL G SVRE LL+TPP +KIPVIV++EL++GA KS RKE NL+K+ FLAPFE++ ++
Sbjct: 1 MLFLDTNICIHFLKGMSASVRERLLATPPSTIKIPVIVEAELLYGAEKSLRKEANLKKVTAFLAPFEVIPFS 72
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A7Y5T1V7_9BACT (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y5T1V7_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 2.000e-23 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3
Query: 174 IMFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSYTQ 395
+++FLDTN CI+FLNG+ S+R+ LLST P VKIP IV++EL+FGAYKS RKEENL K+ FL PFE++S+++
Sbjct: 1 MIYFLDTNTCIYFLNGTSTSIRDKLLSTIPSTVKIPSIVKAELIFGAYKSKRKEENLIKIRTFLEPFEVISFSE 74
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A3P3XR48_9SPIR (PilT protein domain protein n=1 Tax=uncultured spirochete TaxID=156406 RepID=A0A3P3XR48_9SPIR) HSP 1 Score: 95.5 bits (236), Expect = 3.100e-22 Identity = 39/73 (53.42%), Postives = 60/73 (82.19%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSYTQ 395
MF+LDTN CI+FLNG+ S+++ ++ TPP E+ IP +V++EL+FGAYKS RK+EN++K+ +FL PFEI+ + +
Sbjct: 1 MFYLDTNTCIYFLNGTCASIKKKIMETPPSEIAIPSVVKAELLFGAYKSKRKKENIEKIEQFLEPFEIVPFDE 73
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A8J7S883_9BACT (Ribonuclease VapC n=1 Tax=Natronogracilivirgula saccharolytica TaxID=2812953 RepID=A0A8J7S883_9BACT) HSP 1 Score: 94.0 bits (232), Expect = 1.170e-21 Identity = 42/73 (57.53%), Postives = 58/73 (79.45%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSYTQ 395
M+FLDTNICIHFL G S+R+N+L+T P +KIPVIV+SEL++G KS++K+EN +KL FL+ FE++ Y Q
Sbjct: 1 MYFLDTNICIHFLKGEYDSIRQNILATQPHRIKIPVIVESELMYGVSKSSKKKENRKKLEAFLSAFEVVDYRQ 73
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A7C4Q1U1_9SPIR (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C4Q1U1_9SPIR) HSP 1 Score: 90.5 bits (223), Expect = 3.170e-20 Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSY 389
M+FLDTN CI+FLNG S++ LLS P E+ IP IV++EL +GAYKS +K+ENL+++ RFL PFEI+++
Sbjct: 1 MYFLDTNTCIYFLNGMYPSIKARLLSVAPSEIAIPSIVKAELFYGAYKSKKKDENLERIERFLEPFEIVAF 71
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A5C8CCJ4_ACISP (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Acinetobacter sp. TaxID=472 RepID=A0A5C8CCJ4_ACISP) HSP 1 Score: 90.1 bits (222), Expect = 4.030e-20 Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSYTQ 395
M+FLD+N CI+FLNG SVR+ +L+TPPK +KI IVQ+EL+ GAYKS K++ LQK+ FL+ FEI+ +T+
Sbjct: 1 MYFLDSNTCIYFLNGRFESVRDKILNTPPKNIKIASIVQAELLLGAYKSQHKQKTLQKVETFLSAFEIIPFTE 73
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A7C1DJ42_9DELT (Ribonuclease VapC n=1 Tax=Desulfonatronum sp. TaxID=1963255 RepID=A0A7C1DJ42_9DELT) HSP 1 Score: 88.2 bits (217), Expect = 2.260e-19 Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSY 389
M+FLDTN CI++LNG S++ +L+ PP ++ IP +V++EL+FGA KS +K+ENL+K+ +FL PFEI S+
Sbjct: 1 MYFLDTNTCIYYLNGKYESIKRKILALPPSKITIPCVVKAELLFGACKSRKKQENLEKIEKFLEPFEITSF 71
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A7W0EY46_9DELT (Ribonuclease VapC n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7W0EY46_9DELT) HSP 1 Score: 87.8 bits (216), Expect = 3.540e-19 Identity = 40/71 (56.34%), Postives = 57/71 (80.28%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSY 389
MFFLDTN CI +LNG+ SV+E +L+T P ++KI +V++EL+FGAYKS +K+ NL+K+A FL PFEI+ +
Sbjct: 1 MFFLDTNTCIFYLNGTSPSVKEKILATSPAQIKICSMVKAELLFGAYKSRQKQSNLEKVAAFLEPFEIIPF 71
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: A0A5C9D2W9_9SPIR (PilT protein domain-containing protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A5C9D2W9_9SPIR) HSP 1 Score: 86.3 bits (212), Expect = 1.230e-18 Identity = 38/71 (53.52%), Postives = 56/71 (78.87%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSY 389
M++LDTN CI+FLNG+ SV+ +LST P E+ IP IV++EL+F AYKS K+ N++K+ +FL PFEI+++
Sbjct: 1 MYYLDTNTCIYFLNGNYESVKVKILSTGPNEIAIPSIVKAELLFRAYKSINKKNNIEKIVKFLEPFEIVAF 71
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Match: F8F185_TRECH (PilT protein domain protein n=1 Tax=Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) TaxID=744872 RepID=F8F185_TRECH) HSP 1 Score: 84.7 bits (208), Expect = 4.900e-18 Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 3
Query: 177 MFFLDTNICIHFLNGSVLSVRENLLSTPPKEVKIPVIVQSELVFGAYKSARKEENLQKLARFLAPFEILSY 389
M++LDTN CI+FLNG+ VR LLST PKE+ IP IV++EL+ GAYKS ++E N++K+ +FL PF ++ +
Sbjct: 1 MYYLDTNTCIYFLNGTNERVRTKLLSTVPKEIAIPSIVKAELLLGAYKSRKREYNIEKIEQFLEPFTVVPF 71 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128332.5691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128332.5691.1 >prot_M-pyrifera_M_contig128332.5691.1 ID=prot_M-pyrifera_M_contig128332.5691.1|Name=mRNA_M-pyrifera_M_contig128332.5691.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp AAEAEQVSISKWVGNQLKNTLNTNYPTNFEELFGSIQDDTFREPEDVSFTback to top mRNA from alignment at M-pyrifera_M_contig128332:2..499+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128332.5691.1 ID=mRNA_M-pyrifera_M_contig128332.5691.1|Name=mRNA_M-pyrifera_M_contig128332.5691.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig128332:2..499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128332:2..499+ >mRNA_M-pyrifera_M_contig128332.5691.1 ID=mRNA_M-pyrifera_M_contig128332.5691.1|Name=mRNA_M-pyrifera_M_contig128332.5691.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig128332:2..499+ (Macrocystis pyrifera P11B4 male)back to top |