mRNA_M-pyrifera_M_contig128247.5682.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A1Q2M3X6_9GAMM (Uncharacterized protein n=3 Tax=Microbulbifer agarilyticus TaxID=260552 RepID=A0A1Q2M3X6_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 4.170e-9 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 16 LFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSDSL 273
L L L+VHS +AGLA+G STL +F+AI+ HK+ A FALG S+ R + +RG++ F++ TP GI IG L++D+L
Sbjct: 127 LLLTLSVHSLLAGLAMGAQSTLSNFAVVFLAIIAHKVCAGFALGASLHRIGMARHR----ARGLVAGFAIMTPLGIIIGALITDAL 208
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A2J6IES3_9BACT (Uncharacterized protein n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A2J6IES3_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 5.300e-8 Identity = 35/85 (41.18%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 13 VLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSD 267
+LFL L +HS +AG++LG+ ST+ L +F+AI+ HK A+FALG ++V + + S+ + ++ FS+ TP GI IGT+L++
Sbjct: 119 ILFLVLAIHSIIAGMSLGLESTIISGLVIFIAIIAHKGSASFALGVNLVNSKINKSLIIKT----IIFFSIMTPLGIIIGTVLNN 199
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A2J6I4C8_9BACT (Uncharacterized protein n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A2J6I4C8_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 1.350e-7 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 13 VLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSD 267
+LFL L +HS +AG++LG+ STL L +F+AI+ HK A+FALG ++V + + S+ + +V FS+ TP GI IG++L
Sbjct: 113 ILFLVLAIHSIIAGMSLGLESTLISGLVIFIAIIAHKGSASFALGVNLVSSKANKSLIIKT----IVFFSIMTPIGIIIGSVLDS 193
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A0D2G7G0_9DELT (Iron permease n=1 Tax=Dethiosulfatarculus sandiegensis TaxID=1429043 RepID=A0A0D2G7G0_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 1.840e-7 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 4 SAGVLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSDSLN 276
SA L L L++HS VAG ALGV S L L +AIL HK AAFAL ++VRA +P + GMLV FS+STP G+ G L +LN
Sbjct: 108 SAYTLMLVLSIHSFVAGAALGVESGAVSSLALLLAILAHKGSAAFALTVALVRAR----LPRPKTWGMLVLFSVSTPLGVTAGILGGLALN 194
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: UPI000255BBE7 (ZIP family metal transporter n=1 Tax=Microbulbifer agarilyticus TaxID=260552 RepID=UPI000255BBE7) HSP 1 Score: 56.6 bits (135), Expect = 2.020e-7 Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 16 LFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSDSL 273
L L L+VHS +AGLA+G ++L +F+AI+ HK+ A FALG S+ R + S V G++ F++ TP GI G L++D+L
Sbjct: 127 LLLTLSVHSLLAGLAMGAQTSLSNFTVVFLAIIAHKVCAGFALGASLHRIGMAHSRAV----GLVAGFAIMTPLGIVSGALITDAL 208
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: UPI000719C080 (zinc transporter ZIP1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C080) HSP 1 Score: 56.6 bits (135), Expect = 2.640e-7 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 13 VLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSD 267
+L LAL+VHS GLA+G+ ST E VLD+F A++ HK + AF+LG +++++ S + V FS+++P GIAIG ++D
Sbjct: 277 ILVLALSVHSVFEGLAVGLQSTAESVLDIFTALILHKCVLAFSLGLNLIQSDLSMFGTIRSD----VVFSVTSPIGIAIGMGITD 357
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: UPI001BAC2FF0 (ZIP family metal transporter n=1 Tax=Mycobacterium spongiae TaxID=886343 RepID=UPI001BAC2FF0) HSP 1 Score: 56.2 bits (134), Expect = 2.850e-7 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 16 LFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSDSLN 276
L L L+VHS +AG+ALG ++ G + +F+AIL HK FALG S+ R + S +R ++ FS+ TP GI +GT +S L+
Sbjct: 132 LLLTLSVHSIIAGMALGAQKSVAGFVAIFIAILAHKSAGGFALGVSLHRVGTNFSR----ARALVTGFSIMTPLGIMLGTGISALLD 214
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A524MFW6_9BACT (ZIP family metal transporter n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A524MFW6_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 5.040e-7 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 13 VLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGMLVAFSLSTPTGIAIGTLLSDSL 273
VL + L++HS +AG ALG +T+ V+ +F+A + HKL AAFALG S+VR+ A L R +L+ F+L TP GI +G +S +
Sbjct: 117 VLTIVLSLHSIIAGYALGAGATMNMVMIIFLAEVSHKLSAAFALGVSLVRSGMDA----LHLRRVLLLFALMTPFGILLGEFVSSRI 199
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A8J1XSQ0_OWEFU (Ofus.G072702 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XSQ0_OWEFU) HSP 1 Score: 55.5 bits (132), Expect = 6.460e-7 Identity = 34/87 (39.08%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 16 LFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGML---VAFSLSTPTGIAIGTLLSD 267
L +AL++HS GLA+G+ T + L +F+A++ HK + AF+LG +++++ L + G++ +AFSL++PTGIAIG L+ D
Sbjct: 198 LIMALSIHSIFEGLAVGLQPTAQATLQIFIALILHKCVLAFSLGMNLMQSK-------LTTWGVIRSNLAFSLASPTGIAIGMLIID 277
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Match: A0A7S1PFQ3_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PFQ3_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 6.750e-7 Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 1 VSAGVLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRSVVRASNSASIPVLVSRGML----VAFSLSTPTGIAIGTLLSDS 270
VS VL+++L HS + GL LG+ + L VAIL HKL AA++LG VV +S + + + G+L V FS+ TP+GIA+G LLSDS
Sbjct: 291 VSCFVLWVSLVSHSFIEGLGLGLQQDAHHFMSLLVAILSHKLFAAYSLG--VVLSSTLSHSRSIFTYGVLGFLIVTFSVVTPSGIAVGILLSDS 382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128247.5682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128247.5682.1 >prot_M-pyrifera_M_contig128247.5682.1 ID=prot_M-pyrifera_M_contig128247.5682.1|Name=mRNA_M-pyrifera_M_contig128247.5682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp VSAGVLFLALTVHSAVAGLALGVTSTLEGVLDLFVAILCHKLLAAFALGRback to top mRNA from alignment at M-pyrifera_M_contig128247:225..500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128247.5682.1 ID=mRNA_M-pyrifera_M_contig128247.5682.1|Name=mRNA_M-pyrifera_M_contig128247.5682.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig128247:225..500+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128247:225..500+ >mRNA_M-pyrifera_M_contig128247.5682.1 ID=mRNA_M-pyrifera_M_contig128247.5682.1|Name=mRNA_M-pyrifera_M_contig128247.5682.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig128247:225..500+ (Macrocystis pyrifera P11B4 male)back to top |