prot_M-pyrifera_M_contig100230.56.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100230.56.1
Unique Nameprot_M-pyrifera_M_contig100230.56.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A7X6ARV9_9ACTN (SCP2 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ARV9_9ACTN)

HSP 1 Score: 127 bits (318), Expect = 2.670e-35
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 0
Query:    1 MDIFDDTWRGAVASALADLPPVEGASAVIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLL 104
            M + D  W  A A+ALADLP +EGA AV+DYVVS +P GK T+GVT+ DG+VT +   +SA+PD+V+S  Y+    IL+GE S+DAG+MNGALKVEGAH +WLL
Sbjct:    1 MRLLDPDWLAAAAAALADLPGMEGADAVVDYVVSGAPQGKVTVGVTVADGRVTGIAEGRSADPDVVVSGSYETFASILSGESSADAGYMNGALKVEGAHAQWLL 104          
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A6B1B3V2_9ACTN (SCP2 sterol-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B3V2_9ACTN)

HSP 1 Score: 125 bits (314), Expect = 1.150e-34
Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 0
Query:    1 MDIFDDTWRGAVASALADLPPVEGASAVIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLLDLRPVRQAAIEALAPVMADTTT 126
            M +F + W  A   ALA LP V G  AVI+Y +S  P G+ ++ VT+VDG  + +   KS E D+ IS+ Y  A+ IL+GE++SDAG+M+GA+KVEG +  WLLDLRPVR AAI+ LAP+M  T++
Sbjct:    1 MQLFGEEWIAAANEALAGLPAVSGLDAVIEYTISGRPIGRTSLTVTLVDGVFSGIALGKSKECDIAISMNYSDAVAILSGELTSDAGYMSGAVKVEGDYPLWLLDLRPVRVAAIDVLAPLMVQTSS 126          
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A6I2YJJ4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I2YJJ4_9ACTN)

HSP 1 Score: 70.5 bits (171), Expect = 4.630e-13
Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 0
Query:    1 MDIFDDTWRGAVASALADLPPVEGASAVIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLLDLRPV-----RQAAIEALAPVMAD 123
            M +  D W   V+   A LP  EGAS V+ +VVS SP+GK    V + DG++  +   K A+    I+  Y+ AL  L G    D  FM G LK++G +  ++ DLRPV      QA + A+  V  D
Sbjct:    1 MKLLSDEWLAFVSEQAAALPRSEGASLVMQHVVSGSPSGKVQCWVELRDGELVDLAVGKRADATCTITWTYEDALAALRGA-DLDVAFMRGRLKLDGDYRSFMYDLRPVFASPEGQALLAAVRSVTED 127          
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A6B0WIN4_9ACTN (SCP2 sterol-binding domain-containing protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WIN4_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 6.120e-9
Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 0
Query:    1 MDIFDDTWRGAVASALADLPPVEGASAVIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLLDLRPVRQAAI--EALAPV 120
            ++   + W  AVA+ L  +     A  V   VVS SPAG A   V + DG+V AV + +  EPD+V+S  Y   ++   GE+S +A +M+G +K+EG         RP+ +++    ALAP+
Sbjct:   34 LEPLSEGWLAAVAAELEAVDEPGSADGVAQIVVSGSPAGAAPFHVVVADGRV-AVVAGRHPEPDMVLSGSYPDFVRAWEGELSVEAAYMSGRMKLEGDQVLLFDGWRPLLRSSQLRAALAPL 154          
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A2E3JCC5_9ACTN (SCP2 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E3JCC5_9ACTN)

HSP 1 Score: 56.6 bits (135), Expect = 1.140e-7
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   26 SAVIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLLDLRPVRQA 112
            S VI Y +S +  GK    + I D Q+  + + K+   D  +S     A KI +GE      FM G LKVEG H+R+L+D   VR++
Sbjct:   26 SLVIQYEISGTEQGKLRFSLVIKDSQIKEILTGKNKNADCGVSTTSTEAFKIFSGEKKVIEAFMQGDLKVEGDHQRYLIDFESVRKS 112          
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Match: A0A0J0UX49_9ACTN (SCP-2 sterol transfer family protein n=3 Tax=root TaxID=1 RepID=A0A0J0UX49_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 4.580e-6
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 0
Query:    4 FDDTWRGAVASALADLPPVEGASA----VIDYVVSASPAGKATIGVTIVDGQVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHERWLLDLRPVRQAAIEALAPVMADTT 125
              + W    A+ALA  P +  A+A    +I Y V+ SP GK T  + +  GQ T++    + +  +   + YD A  I  GE+S+ A FM G LK+ G     L+          +ALAP+   TT
Sbjct:    5 LSEEWLDQAATALAADPAIAAATAESELIILYEVTGSPTGKTTYSIQMDHGQ-TSLRIGPAKDAQVSFGMDYDTAAAIAQGELSAQAAFMQGRLKL-GGDVSVLIRQHACIDGLSDALAPLRDATT 128          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100230.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A7X6ARV9_9ACTN2.670e-3558.65SCP2 domain-containing protein n=1 Tax=Actinomycet... [more]
A0A6B1B3V2_9ACTN1.150e-3450.00SCP2 sterol-binding domain-containing protein n=1 ... [more]
A0A6I2YJJ4_9ACTN4.630e-1336.72Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6B0WIN4_9ACTN6.120e-934.43SCP2 sterol-binding domain-containing protein n=6 ... [more]
A0A2E3JCC5_9ACTN1.140e-736.78SCP2 domain-containing protein n=1 Tax=Acidimicrob... [more]
A0A0J0UX49_9ACTN4.580e-631.75SCP-2 sterol transfer family protein n=3 Tax=root ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036527SCP2 sterol-binding domain superfamilyGENE3D3.30.1050.10coord: 8..101
e-value: 5.2E-11
score: 44.8
IPR036527SCP2 sterol-binding domain superfamilySUPERFAMILY55718SCP-likecoord: 7..100
IPR003033SCP2 sterol-binding domainPFAMPF02036SCP2coord: 20..97
e-value: 1.1E-8
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100230contigM-pyrifera_M_contig100230:103..483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100230.56.1mRNA_M-pyrifera_M_contig100230.56.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100230 100..483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100230.56.1 ID=prot_M-pyrifera_M_contig100230.56.1|Name=mRNA_M-pyrifera_M_contig100230.56.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
MDIFDDTWRGAVASALADLPPVEGASAVIDYVVSASPAGKATIGVTIVDG
QVTAVESAKSAEPDLVISLKYDAALKILTGEMSSDAGFMNGALKVEGAHE
RWLLDLRPVRQAAIEALAPVMADTTT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036527SCP2_sterol-bd_dom_sf
IPR003033SCP2_sterol-bd_dom