mRNA_M-pyrifera_M_contig128110.5648.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A554X7N3_9BURK (Bifunctional enzyme IspD/IspF n=1 Tax=Tepidimonas thermarum TaxID=335431 RepID=A0A554X7N3_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 8.900e-7 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 RAESDGFSGV-DAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAKSFGDATWR 174
R ++ GF+G+ D A ++H GA P R V G +NIKVT+P+D A+AEAL ++ WR
Sbjct: 201 RHQASGFAGITDEASAIEHAGARP-RLVRGHAQNIKVTYPEDFAVAEALLQAGAAPAWR 258
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A5Q2RLZ3_9ACTN (NTP transferase domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RLZ3_9ACTN) HSP 1 Score: 52.8 bits (125), Expect = 1.300e-6 Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAKSF 156
RA +G G+D AE V G R V GD RNIKVT PDD A AEA+A+ +
Sbjct: 185 RAAREGIEGLDTAELVAAAGGPAARVVPGDDRNIKVTTPDDVARAEAIARRW 236
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: UPI001D0C8455 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Nocardioides lijunqiniae TaxID=2760832 RepID=UPI001D0C8455) HSP 1 Score: 50.4 bits (119), Expect = 6.930e-6 Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEAL 144
+A +DGF G D A V AGP V G RN+K+T P+D ALAE L
Sbjct: 152 QAAADGFQGTDTASCVARYAAGPVAAVAGSSRNLKITFPEDVALAEEL 199
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A7V9J0M0_9ACTN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9J0M0_9ACTN) HSP 1 Score: 50.4 bits (119), Expect = 9.000e-6 Identity = 27/49 (55.10%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 4 AESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAK 150
A S GF G D A T +H G P V GD RNIKVT P+D A+AE+L K
Sbjct: 193 AASRGFEGTDTASTAEHFGI-PVAIVPGDPRNIKVTLPEDIAVAESLLK 240
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A5S4ZPD9_9FIRM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Desulfallas thermosapovorans DSM 6562 TaxID=1121431 RepID=A0A5S4ZPD9_9FIRM) HSP 1 Score: 48.5 bits (114), Expect = 4.120e-5 Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 4 AESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEAL 144
A DGFSG D A V+ G P + V GD NIK+T P+D ALAEAL
Sbjct: 178 AARDGFSGTDDASLVERLGH-PVKLVPGDYANIKITTPEDIALAEAL 223
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: UPI0010702005 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Nocardioides sp. 503 TaxID=2508326 RepID=UPI0010702005) HSP 1 Score: 48.5 bits (114), Expect = 4.160e-5 Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAKS 153
+A ++GF G D A V GA P V G RN+K+T P+D ALAE L ++
Sbjct: 175 QAAAEGFQGTDTASCVARYGAWPVAAVAGSARNLKITFPEDVALAEELTQA 225
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A7C3U3Z0_9DELT (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3U3Z0_9DELT) HSP 1 Score: 48.5 bits (114), Expect = 4.260e-5 Identity = 24/48 (50.00%), Postives = 30/48 (62.50%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEAL 144
+AE DGF G D A V+ G P ++GD NIK+T P+D ALAE L
Sbjct: 177 KAEEDGFQGTDDAALVERLGH-PVTLIQGDYTNIKITTPEDLALAETL 223
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A7K2AIZ5_9ACTN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AIZ5_9ACTN) HSP 1 Score: 48.5 bits (114), Expect = 4.710e-5 Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAK 150
RA+ GF GVD AETV+ R GD N+K+T P+D ALAE +A+
Sbjct: 207 RAQVAGFEGVDTAETVERFSDLKVRATPGDPNNLKLTFPEDFALAETIAR 256
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: UPI001BC522D2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dethiobacter sp. TaxID=2093370 RepID=UPI001BC522D2) HSP 1 Score: 48.1 bits (113), Expect = 6.020e-5 Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 1
Query: 4 AESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAKSFGDA 165
A ++G D A V+ CG P R V GD NIKVT P+D ALAE + GDA
Sbjct: 179 ARAEGLVATDDAALVERCGY-PVRLVTGDYENIKVTTPEDLALAEIILGRRGDA 231
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Match: A0A841H5D3_9BACT (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H5D3_9BACT) HSP 1 Score: 47.8 bits (112), Expect = 8.140e-5 Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1 RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALA 147
RA +DGF+ D A + AGP R V G RN+KVT P+D A+AEA+A
Sbjct: 178 RAAADGFAATDDAALFERY-AGPVRVVMGSPRNLKVTRPEDVAVAEAIA 225 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128110.5648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128110.5648.1 >prot_M-pyrifera_M_contig128110.5648.1 ID=prot_M-pyrifera_M_contig128110.5648.1|Name=mRNA_M-pyrifera_M_contig128110.5648.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp RAESDGFSGVDAAETVQHCGAGPTRWVEGDQRNIKVTHPDDRALAEALAKback to top mRNA from alignment at M-pyrifera_M_contig128110:321..497- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128110.5648.1 ID=mRNA_M-pyrifera_M_contig128110.5648.1|Name=mRNA_M-pyrifera_M_contig128110.5648.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=177bp|location=Sequence derived from alignment at M-pyrifera_M_contig128110:321..497- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128110:321..497- >mRNA_M-pyrifera_M_contig128110.5648.1 ID=mRNA_M-pyrifera_M_contig128110.5648.1|Name=mRNA_M-pyrifera_M_contig128110.5648.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig128110:321..497- (Macrocystis pyrifera P11B4 male)back to top |