mRNA_M-pyrifera_M_contig127955.5628.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A6L9ECZ4_9FLAO (DNA helicase PriA n=1 Tax=Poritiphilus flavus TaxID=2697053 RepID=A0A6L9ECZ4_9FLAO) HSP 1 Score: 53.5 bits (127), Expect = 1.430e-6 Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 10 KLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
KL+ + +H L LP+Y+S+YT++ KKY F I+GQTG IYG RPY
Sbjct: 294 KLSEETFKHVL--LPVYISSYTYNRKKYHFYINGQTGVIYGTRPY 336
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A3M1RQS3_9BACT (Zinc ribbon domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RQS3_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 3.790e-6 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 19 FKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPYGIGQAGSVLSS 177
F++ LI LP+Y+ TYT+ +KKY F+I+GQTG+ YG +P + G ++
Sbjct: 38 FENASSDLILLPVYLLTYTYRDKKYHFLINGQTGKHYGTKPLSWAKIGLAAAA 90
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: UPI001E4CC5A9 (DNA helicase PriA n=1 Tax=Nonlabens antarcticus TaxID=392714 RepID=UPI001E4CC5A9) HSP 1 Score: 52.0 bits (123), Expect = 4.960e-6 Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 1 MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
M KL + +H L LP+Y+S+Y +NK+Y F ++GQTG IYG RPY
Sbjct: 272 MDMKLADETFKHVL--LPLYISSYNFNNKRYSFYVNGQTGAIYGYRPY 317
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: UPI000471ACEB (hypothetical protein n=1 Tax=Aquimarina pacifica TaxID=1296415 RepID=UPI000471ACEB) HSP 1 Score: 51.2 bits (121), Expect = 9.390e-6 Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 4 QPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
Q +LT + +H L LP+Y+S Y +S KKY F I+GQTG I G+RPY
Sbjct: 297 QMRLTDETFKHIL--LPVYISAYQYSGKKYNFFINGQTGAISGKRPY 341
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: UPI00191D8503 (DNA helicase PriA n=1 Tax=Aquimarina mytili TaxID=874423 RepID=UPI00191D8503) HSP 1 Score: 50.8 bits (120), Expect = 1.280e-5 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 1
Query: 43 IYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
I LP+Y+S YT+S KKY F I+GQTG I G+RPY
Sbjct: 309 ILLPVYISAYTYSGKKYNFFINGQTGTISGKRPY 342
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A090WB34_NONUL (Primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=Nonlabens ulvanivorans TaxID=906888 RepID=A0A090WB34_NONUL) HSP 1 Score: 48.5 bits (114), Expect = 1.340e-5 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 1 MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
M +L+ + +H L LP+Y+S+Y + KY F ++GQTG IYG+RPY
Sbjct: 28 MDMRLSEETFKHIL--LPVYISSYNFNGTKYNFFVNGQTGAIYGKRPY 73
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A4V2F7B4_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina brevivitae TaxID=323412 RepID=A0A4V2F7B4_9FLAO) HSP 1 Score: 49.7 bits (117), Expect = 3.290e-5 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 10 KLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
KLT + +H L LP+++S+Y + K Y F ++GQTG IYG+RPY
Sbjct: 301 KLTEETFKHIL--LPVFISSYKYDGKTYNFFVNGQTGSIYGKRPY 343
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A504JCL0_9FLAO (DNA helicase PriA n=1 Tax=Aquimarina algicola TaxID=2589995 RepID=A0A504JCL0_9FLAO) HSP 1 Score: 49.3 bits (116), Expect = 4.500e-5 Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
+Q L+ + +H L LP+Y+S+Y +S KKY F I+GQTG+I G RPY
Sbjct: 297 LQMSLSDETFKHIL--LPVYISSYRYSGKKYNFFINGQTGKISGGRPY 342
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A7L5G194_9FLAO (DNA helicase PriA n=1 Tax=Nonlabens sp. Ci31 TaxID=2608253 RepID=A0A7L5G194_9FLAO) HSP 1 Score: 48.9 bits (115), Expect = 6.150e-5 Identity = 21/48 (43.75%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 1 MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
++ +L+ + +H L LP+Y+S+Y ++K+Y F ++GQTG+IYG RPY
Sbjct: 291 LEMQLSEETFKHIL--LPVYISSYKFNSKRYNFYVNGQTGKIYGTRPY 336
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Match: A0A084JTI0_NONUL (DNA helicase PriA n=6 Tax=Flavobacteriia TaxID=117743 RepID=A0A084JTI0_NONUL) HSP 1 Score: 48.5 bits (114), Expect = 8.420e-5 Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 1 MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPY 144
M +L+ + +H L LP+Y+S+Y + KY F ++GQTG IYG+RPY
Sbjct: 295 MDMRLSEETFKHIL--LPVYISSYNFNGTKYNFFVNGQTGAIYGKRPY 340 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127955.5628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127955.5628.1 >prot_M-pyrifera_M_contig127955.5628.1 ID=prot_M-pyrifera_M_contig127955.5628.1|Name=mRNA_M-pyrifera_M_contig127955.5628.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp MQPKLTFKDIQHSLIYLPMYVSTYTHSNKKYQFVISGQTGEIYGERPYGIback to top mRNA from alignment at M-pyrifera_M_contig127955:167..454- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127955.5628.1 ID=mRNA_M-pyrifera_M_contig127955.5628.1|Name=mRNA_M-pyrifera_M_contig127955.5628.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=288bp|location=Sequence derived from alignment at M-pyrifera_M_contig127955:167..454- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127955:167..454- >mRNA_M-pyrifera_M_contig127955.5628.1 ID=mRNA_M-pyrifera_M_contig127955.5628.1|Name=mRNA_M-pyrifera_M_contig127955.5628.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig127955:167..454- (Macrocystis pyrifera P11B4 male)back to top |