mRNA_M-pyrifera_M_contig102586.561.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A6B1AWN9_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWN9_9ACTN) HSP 1 Score: 328 bits (840), Expect = 1.170e-110 Identity = 167/221 (75.57%), Postives = 183/221 (82.81%), Query Frame = 1 Query: 4 AIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPA----DTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 A GVV DVSDW+S++ LRA C S FGPAD+VMNNAGVAGGG ISA+DL AWEWTL VNLWGVI+GVKAFLP M+ERGSGH+INTASIAGHL STGMGAYN SKHAV F+ETLQQEM+EG+TGVGVTCLCPGFVATNI++SERNR ER+ GPDL S+ +S D GSAIAD YAAQMDPA VA QVV AIR NQ WLFTDDLAD MIR RH DI Sbjct: 57 ASGVVCDVSDWESVDRLRARCESVFGPADVVMNNAGVAGGGSISALDLKAWEWTLAVNLWGVIHGVKAFLPAMIERGSGHVINTASIAGHLTSTGMGAYNASKHAVIAFSETLQQEMLEGDTGVGVTCLCPGFVATNIINSERNRQERYLDPGPDLGSDVGDSLDGTQLGDAGSAIADLYAAQMDPAKVAEQVVAAIRANQFWLFTDDLADGMIRERHADI 277
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A6N9EYQ5_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EYQ5_9ACTN) HSP 1 Score: 244 bits (623), Expect = 1.020e-77 Identity = 125/231 (54.11%), Postives = 150/231 (64.94%), Query Frame = 1 Query: 4 AIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFR--------------AGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 A+ V DVS W S+EALR C ++GPAD++ NNAGVA GPIS + L +WEW LGVNLWGVI+G +AFLP M+ERGSGHI+NTAS+ GH+ S G+G YN SKH V +ETL EM+ TGVGVTCLCPG V+TNI+ SERNRPE + AGGP+ E A AI D YA + P+VVA VV+AIR +LWLFTD D I RH I Sbjct: 57 AVAVTCDVSSWPSVEALRDACVDAYGPADVLCNNAGVAATGPISELSLKSWEWCLGVNLWGVIHGCRAFLPSMIERGSGHIVNTASVLGHITSAGIGPYNVSKHGVVALSETLHAEMLADGTGVGVTCLCPGLVSTNILDSERNRPEHLQDQPGVTGLWDSDAVAGGPESEMRA----------AIRDLYAQALRPSVVADMVVRAIRGGELWLFTDHDFDGAIAARHRSI 277
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A6B0ZH44_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZH44_9ACTN) HSP 1 Score: 238 bits (608), Expect = 1.790e-75 Identity = 122/221 (55.20%), Postives = 152/221 (68.78%), Query Frame = 1 Query: 4 AIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFR----AGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 A+ VV DVS W S+EALR CT ++GPAD++ NNAGVAG GP++ L WEW LGVNLWGVI+G +AFLP M+ERGSGH++NTAS+ GHL S G+G YN SK+ V +ETL EM TGVGVTCLCPG V+TNI+ SERNRPER G ++ S+ DES + +A+ +AY MDPA+V VV+AI +Q WLFTD + I RH I Sbjct: 57 AVAVVCDVSSWPSVEALRDACTEAYGPADVLCNNAGVAGRGPVAEASLKTWEWCLGVNLWGVIHGCRAFLPAMIERGSGHVVNTASVLGHLCSPGVGPYNVSKYGVVALSETLHLEMQAESTGVGVTCLCPGLVSTNILDSERNRPERLLDDAGRGSLNVFSDDDES---EMLAAVREAYKHAMDPALVGDMVVEAILADQFWLFTDGHFEGFIAERHRGI 274
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A6B0ZEZ8_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZEZ8_9ACTN) HSP 1 Score: 236 bits (602), Expect = 3.120e-74 Identity = 122/231 (52.81%), Postives = 151/231 (65.37%), Query Frame = 1 Query: 4 AIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFR--------------AGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 A+ V DVS W S+EALR C ++GPAD++ NNAGVA G ++ + L +WEW LGVNLWGVI+G +AFL M+ERGSGHI+NTASI GHL S G+G YN SKH V +ETL EM+ TGVGVTCLCPG V+TNI+ SER+RPER + AGGP+ E T +A+ D YA + P+ VA VV+AIR +QLWLFTD D I RH +I Sbjct: 81 AMAVACDVSSWTSVEALRDACVDAYGPADVLCNNAGVAATGSMAELSLKSWEWCLGVNLWGVIHGCQAFLGPMIERGSGHIVNTASILGHLSSAGIGPYNVSKHGVVALSETLHAEMLSEGTGVGVTCLCPGLVSTNILDSERSRPERLQDHPGVDGTWDSDMVAGGPESE----------TRAAVRDLYAQALRPSAVADMVVEAIRADQLWLFTDGDFDAAIAARHREI 301
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A7C1UEE6_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UEE6_9ACTN) HSP 1 Score: 193 bits (491), Expect = 1.340e-57 Identity = 103/216 (47.69%), Postives = 138/216 (63.89%), Query Frame = 1 Query: 10 GVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVE-GETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 GVV DVS +++ AL T FGP D++ NNAGV G PI+A+DL W+W LGVNLWGV++G++AFLP M+E+GSGHI+NTAS+AG L GM AY+ SK AV +E+L E+V G TG+GV+ LCPGFVAT+IV S RNRP+ PD E I Y ++P+ VA +VV A+R+ +++TDD E I R+ + Sbjct: 88 GVVVDVSSSEAVVALARTVREVFGPVDLLCNNAGVGGSSPIAALDLELWDWVLGVNLWGVVHGIRAFLPGMLEQGSGHIVNTASVAGLLGFAGMAAYDVSKAAVISLSESLHHELVATGATGIGVSVLCPGFVATDIVRSRRNRPDHVVEVEPDPARE-------QLREEILRGYGEALNPSAVATKVVAALREGLFYIYTDDDFAEPIAERNRAV 296
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A2E3ZEK8_9ACTN (Uncharacterized protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E3ZEK8_9ACTN) HSP 1 Score: 192 bits (488), Expect = 1.870e-57 Identity = 104/217 (47.93%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 4 AIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 A G+V DVSD DS+ + + S F P I+ NAGV GGPIS D+ WEW LGVNLWGVIYG+ AFLP M E+ +GHI+ T+SIAGHL MG YN SKHAV ETL EM E + VGV+ LCPG V TNI+ S+RNRPE + ES D+ A+ + Y +DP VA V +A++ Q ++FT++ + I+ RH DI Sbjct: 56 ATGIVVDVSDIDSVRSFKDRIFSEFTPPYILCLNAGVGAGGPISESDILDWEWVLGVNLWGVIYGLNAFLPFMQEKNNGHIVITSSIAGHLSYPNMGIYNASKHAVLSIAETLCYEMQEKSSDVGVSVLCPGLVKTNILDSDRNRPEILTSNDSLNESNDDDGRK----EAVREIYNLALDPESVADLVFKAVQSKQFYIFTENTFQDAIKSRHRDI 268
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A3M2GRZ4_ACTSX (SDR family NAD(P)-dependent oxidoreductase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GRZ4_ACTSX) HSP 1 Score: 182 bits (462), Expect = 4.780e-55 Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 1 Query: 175 NLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 NLWGV++G++AFLP M+ RG GH++NTASIAGH+ S GMG YN SK AV +ETL QEM+ TGVGVTCLCPGFVAT+I+ SERNRPE P S DE T +A+ADAYAAQ+DPAVVA V+ A+R W+FTDD+ D+++ RH +I Sbjct: 1 NLWGVVHGLRAFLPAMIARGEGHVVNTASIAGHVCSPGMGPYNASKFAVVAISETLHQEMLRDGTGVGVTCLCPGFVATDILDSERNRPEPLLDATPPG-SGLDEQ----TRAAVADAYAAQLDPAVVAELVLDAVRAGAFWVFTDDVFDDLVAARHAEI 155
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A2E1CQY5_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E1CQY5_9ACTN) HSP 1 Score: 183 bits (464), Expect = 7.650e-54 Identity = 98/219 (44.75%), Postives = 130/219 (59.36%), Query Frame = 1 Query: 1 TAIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTGS-AIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 +A G++ DV+D DS+ + + S F P ++ NAGV GG IS D+ WEW LGVNLWGVIYG+ AFLP M E +GH++ T+SIAGHL MG YN SKHAV ETL E+ E + +GV+ LCPG V TNI+ S+RNRPE + DES D A+ + Y ++P VA V +A+ Q ++FT+D I+ RH DI Sbjct: 55 SATGIIVDVADLDSVHSFKEQVISDFTPPYVLCLNAGVGAGGSISESDILDWEWVLGVNLWGVIYGLNAFLPIMEENNNGHVVITSSIAGHLSYPNMGVYNASKHAVLSIAETLYYEVQEKNSDIGVSVLCPGLVKTNILDSDRNRPEILT-----INDSLDESDDHDIRKEAVREIYNLALEPERVADLVFKAVESRQFYIFTEDTFQGAIQSRHRDI 268
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A0C1UFY0_9ACTN (Uncharacterized protein n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A0C1UFY0_9ACTN) HSP 1 Score: 181 bits (459), Expect = 4.090e-53 Identity = 95/216 (43.98%), Postives = 132/216 (61.11%), Query Frame = 1 Query: 7 IGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTGSAIADAYAAQMDPAVVAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 + V+ DVSD S++AL ++FGP +V NAGV GG + I ++ W+W L VNLWGVI+G+ FLP M + +GHI+ T+SIAGHL MG YN SKHAV ETL E+ E ++ VGV+ LCPG V T I++SERNRPE + E D+ A + + Y +DP++VA V +A+ QL++FTDD + +R RH +I Sbjct: 57 LSVLTDVSDLKSVQALADHSINTFGPPTLVCLNAGVGAGGEMGEITIADWQWVLSVNLWGVIHGLSVFLPIMQQEDNGHIVITSSIAGHLSYPRMGPYNASKHAVLTIAETLYYELAEAQSNVGVSVLCPGLVRTQILNSERNRPESLMGNPLNSSDEEDDIRRA----IVQEIYDQALDPSIVAELVFEAVESKQLYIFTDDSFSDALRQRHDNI 268
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Match: A0A432JRQ8_9ACTN (Short-chain dehydrogenase/reductase SDR n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A432JRQ8_9ACTN) HSP 1 Score: 180 bits (457), Expect = 1.210e-52 Identity = 102/221 (46.15%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 7 IGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSAWEWTLGVNLWGVIYGVKAFLPDMVERGSGHIINTASIAGHLVSTGMGAYNTSKHAVSGFTETLQQEMVEGETGVGVTCLCPGFVATNIVSSERNRPERFRAGGPDLESEADESAPADTG----SAIADAYAAQMDPAV-VAGQVVQAIRDNQLWLFTDDLADEMIRGRHHDI 654 IGV DV+D DS A ++FG +V NAGVAG G I+ L+ W+W LGVNLWG+++G+ FLPD++ GH++ TAS+AGH +GAYN SKHA ETL E+ G + V VTCLCPG V+TNI++SERNRPE F SE APAD A+ + +AA PA VA V A+ D WLFTDD + I RH +I Sbjct: 58 IGVRCDVADHDSFTAFGDEVAAAFGQVHVVCLNAGVAGSGTIADSSLANWKWVLGVNLWGIVHGLDVFLPDLLANDEGHVVVTASVAGHTSYANIGAYNASKHAAVTIAETLHNELRAGGSAVAVTCLCPGLVSTNILTSERNRPEEF--------SEILAEAPADDDLAQHEAMVEWFAANAKPASEVADLVHDAVVDQTFWLFTDDEFADAIGQRHDEI 270 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102586.561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102586.561.1 >prot_M-pyrifera_M_contig102586.561.1 ID=prot_M-pyrifera_M_contig102586.561.1|Name=mRNA_M-pyrifera_M_contig102586.561.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp TAIGVVADVSDWDSIEALRATCTSSFGPADIVMNNAGVAGGGPISAIDLSback to top mRNA from alignment at M-pyrifera_M_contig102586:2..655- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102586.561.1 ID=mRNA_M-pyrifera_M_contig102586.561.1|Name=mRNA_M-pyrifera_M_contig102586.561.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig102586:2..655- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102586:2..655- >mRNA_M-pyrifera_M_contig102586.561.1 ID=mRNA_M-pyrifera_M_contig102586.561.1|Name=mRNA_M-pyrifera_M_contig102586.561.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig102586:2..655- (Macrocystis pyrifera P11B4 male)back to top |