mRNA_M-pyrifera_M_contig102573.560.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102573.560.1
Unique NamemRNA_M-pyrifera_M_contig102573.560.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A1J4KST9_9EUKA (Non-specific serine/threonine protein kinase n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KST9_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 2.930e-10
Identity = 30/90 (33.33%), Postives = 52/90 (57.78%), Query Frame = 1
Query:   34 RAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDYYLVPSEVPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVK 303
            R+GW+ KQG  V+NW+KRWFVLRG  ++Y+ KP D +E G +D+        E+     + + C  ++  +   Y  +++T  +  +W+K
Sbjct:    8 RSGWMTKQGGVVKNWKKRWFVLRGKELAYYEKP-DKKESGVIDLTKA----KEITTAPETKKKCALKIVTSGRTYYCYTDTQNDCDSWIK 92          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A5J4WB16_9EUKA (Uncharacterized protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WB16_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 3.300e-10
Identity = 31/99 (31.31%), Postives = 56/99 (56.57%), Query Frame = 1
Query:   40 GWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDYYLVPSEVPRPSVSMRLCNKRV----AGTELDYLIHSETVEEFVAWVKAIASVQR 324
            GWL KQGH  +NW++RWF LRG+++ Y++KPE  +E G + +    +  ++    SV+ + C+  +         D+ ++++   E  AW KAI +  +
Sbjct:   76 GWLTKQGHIRKNWKRRWFSLRGNQLFYYAKPEITKESGIIPLAQAKVEDAD----SVTQKSCSFHIFYPHESKAKDFYVYADNAVEKSAWCKAIENASK 170          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A2P6NTR4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTR4_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 7.710e-10
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:   34 RAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDYYLVPSE--VPRPSVSMRLCNKR------VAGTELDYLIHSETVEEFVAWVKAI 309
            + GWL K+GH+VRNW++RWFVL+   +SY++KP D    G + + D   + +E  V +  V M    +R      +      YLIH++T  +   W+ +I
Sbjct:  393 KGGWLTKRGHKVRNWKRRWFVLKDPNLSYYTKPRDTIPNGFIVLDDIMTIITEENVLKEDVMMSTNEERPRFWFEIVTKTNSYLIHADTERDMNEWLDSI 492          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A6B2L2Q4_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2Q4_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 3.530e-9
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 1
Query:   34 RAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDYYLVPSEVPRPSVSMRLCNKRVAGTEL------DYLIHSETVEEFVAWVKAIA 312
            R GWL KQG+QVRNW++RWFVL   R+ Y+ KP      G + I D Y V    P    +    N  +  T +       Y I+++  ++   WV AI+
Sbjct:  360 RGGWLTKQGNQVRNWKRRWFVLHPDRIEYYKKPNTLNPAGRIPIKDVYCVTILSPEDMDTFFDANVAINTTFVINTTSRTYFIYADNEQDKDDWVDAIS 458          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: UPI0016042B8B (rho GTPase-activating protein 22-like isoform X1 n=4 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016042B8B)

HSP 1 Score: 62.4 bits (150), Expect = 4.990e-9
Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 1
Query:   19 RGRTVRAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAV-----DILDYYLVPSE--------VPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASV 318
            R + + +GWL KQG  V+ W++RWFVLRG ++ Y++K ++ + +G +     ++++    P +        VP P       N+R+  +   YLI + +  E  AW++AI  V
Sbjct:    6 RQKVLHSGWLRKQGGVVKTWQRRWFVLRGDQLFYYTKEDESKLQGTIFLPGNNVVELPPCPDDPSRYLFEVVPGPG------NQRINASHETYLIQAASQSEMEAWIRAIRRV 112          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A6P4ZRC8_BRABE (rho GTPase-activating protein 24-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZRC8_BRABE)

HSP 1 Score: 62.0 bits (149), Expect = 6.710e-9
Identity = 35/117 (29.91%), Postives = 62/117 (52.99%), Query Frame = 1
Query:    7 EEELRGRTVRAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAV-----DILDYYLVPSE--------VPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASV 318
            E + R + + +GWL KQG  V+NW++RWFVLRG ++ Y++K ++ + +G +     ++L+    P +        VP P       ++R+      YLI + +  E   W++AI  V
Sbjct:    3 EGDYRQKVLHSGWLRKQGGVVKNWQRRWFVLRGDQLFYYTKEDESKLQGTIFLPGNNVLELPPNPDDPTRFLFEVVPGPG------SQRINANHETYLIQAASQSEMEGWIRAIRRV 113          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A7S3DIW0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DIW0_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 1.690e-8
Identity = 34/102 (33.33%), Postives = 54/102 (52.94%), Query Frame = 1
Query:   22 GRTVRAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDYYLVPSEVPRP---SVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASV 318
            G  +  GWL K+GH+V+NW++R+FVLRGS ++Y    E     G+  +    + P    R    ++ + L N    G    Y+I + + +E  AWV AI +V
Sbjct:  156 GEVLMQGWLMKEGHKVKNWKRRYFVLRGSMLTYSKDKEQAVVMGSFPLSLCTITPPIRRRKYPHAMRITLPNPVPIGVHTKYIIAASSADELRAWVFAIRTV 257          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A5P8NFM9_9BIVA (Non-specific serine/threonine protein kinase n=4 Tax=Pectinidae TaxID=6566 RepID=A0A5P8NFM9_9BIVA)

HSP 1 Score: 60.8 bits (146), Expect = 1.690e-8
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   28 TVRAGWLWKQGHQVRNWRKRWFVLR--GSRMSYFSKPEDGREKGAVD--ILDYYLVPSEVPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASV 318
             ++ G+LWK+G  ++NWRKR+F+LR  GS + + +KPE G      D  + D  L+P E PRP+  +    +  A  E  + +  E+ +E   W++AI S+
Sbjct:   10 VIKEGFLWKRGEHIKNWRKRYFILRDDGSFLGFRTKPEHGLNDPLNDFTVKDCQLMPQEKPRPNTFIIRGLQWTAVVERMFCV--ESADERQEWMEAIRSI 108          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: UPI00064491FB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064491FB)

HSP 1 Score: 60.1 bits (144), Expect = 3.300e-8
Identity = 29/99 (29.29%), Postives = 53/99 (53.54%), Query Frame = 1
Query:   31 VRAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREKGAVDILDY-YLVPSEVPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASVQR 324
            V +G+L K+GH  +NWR+RWFVL+  +++Y+  P+D    GA+ I +  Y+V  +            + V    ++Y+I ++   +   WV  + S +R
Sbjct:  392 VHSGFLIKKGHNFKNWRRRWFVLKDGQLAYYKSPKDTVPAGAIPIAEIEYVVVCDDSLAKEGYSFAFQVVTSKSINYIIAADNERDLEDWVDCLNSAKR 490          
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Match: A0A4Y5MUK0_PINIB (Non-specific serine/threonine protein kinase n=1 Tax=Pinctada imbricata TaxID=66713 RepID=A0A4Y5MUK0_PINIB)

HSP 1 Score: 59.7 bits (143), Expect = 4.290e-8
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 1
Query:   28 TVRAGWLWKQGHQVRNWRKRWFVLR--GSRMSYFSKPEDGREKGAVD--ILDYYLVPSEVPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWVKAIASVQRD 327
             V+ G+LWK+G  ++NWRKR+F+LR  GS + Y +KPE G      D  + D  L+  E P+P+  +    +     E  + +  E+ EE   W+ AI SV  D
Sbjct:    8 VVKEGYLWKRGEHIKNWRKRYFILRKDGSFLGYRAKPEHGLGDPLNDFTVRDCQLMKQEKPKPNTFIIRGLQWTVVVERMFCV--ESAEEREDWIAAIRSVAED 109          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102573.560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J4KST9_9EUKA2.930e-1033.33Non-specific serine/threonine protein kinase n=1 T... [more]
A0A5J4WB16_9EUKA3.300e-1031.31Uncharacterized protein n=1 Tax=Streblomastix stri... [more]
A0A2P6NTR4_9EUKA7.710e-1034.00Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A6B2L2Q4_9EUKA3.530e-935.35Uncharacterized protein (Fragment) n=1 Tax=Arcella... [more]
UPI0016042B8B4.990e-930.09rho GTPase-activating protein 22-like isoform X1 n... [more]
A0A6P4ZRC8_BRABE6.710e-929.91rho GTPase-activating protein 24-like n=1 Tax=Bran... [more]
A0A7S3DIW0_9EUKA1.690e-833.33Hypothetical protein (Fragment) n=2 Tax=Palpitomon... [more]
A0A5P8NFM9_9BIVA1.690e-834.65Non-specific serine/threonine protein kinase n=4 T... [more]
UPI00064491FB3.300e-829.29hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A4Y5MUK0_PINIB4.290e-835.58Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102573contigM-pyrifera_M_contig102573:219..551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score68.6
Seed ortholog evalue2.2e-09
Seed eggNOG ortholog36080.S2J5A6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sterile alpha motif.
EggNOG OGs293IM@1,2RAFH@2759,39KN7@33154,3Q51D@4751
COG Functional cat.T
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size333
Cds size333
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.5872366-CDS-M-pyrifera_M_contig102573:218..5511622815529.5872366-CDS-M-pyrifera_M_contig102573:218..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102573 219..551 +
1692277450.8841708-CDS-M-pyrifera_M_contig102573:218..5511692277450.8841708-CDS-M-pyrifera_M_contig102573:218..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102573 219..551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102573.560.1prot_M-pyrifera_M_contig102573.560.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102573 219..551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102573.560.1

>prot_M-pyrifera_M_contig102573.560.1 ID=prot_M-pyrifera_M_contig102573.560.1|Name=mRNA_M-pyrifera_M_contig102573.560.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
KKEEELRGRTVRAGWLWKQGHQVRNWRKRWFVLRGSRMSYFSKPEDGREK
GAVDILDYYLVPSEVPRPSVSMRLCNKRVAGTELDYLIHSETVEEFVAWV
KAIASVQRDFE
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mRNA from alignment at M-pyrifera_M_contig102573:219..551+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102573.560.1 ID=mRNA_M-pyrifera_M_contig102573.560.1|Name=mRNA_M-pyrifera_M_contig102573.560.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig102573:219..551+ (Macrocystis pyrifera P11B4 male)
AAGAAGGAGGAAGAGCTGAGAGGGAGGACAGTGCGAGCTGGGTGGTTGTG GAAGCAAGGGCATCAAGTGCGGAATTGGAGAAAGCGATGGTTTGTGTTGC GTGGCAGTCGAATGAGCTATTTCTCTAAGCCCGAAGATGGACGGGAAAAA GGCGCTGTGGATATCCTAGACTACTACCTGGTGCCTTCAGAAGTACCAAG ACCGTCCGTGTCCATGCGTCTGTGCAACAAGCGCGTCGCAGGTACAGAAC TCGACTACCTGATCCACAGCGAGACTGTGGAGGAGTTTGTGGCGTGGGTG AAAGCCATTGCGAGCGTACAACGCGACTTTGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102573:219..551+

>mRNA_M-pyrifera_M_contig102573.560.1 ID=mRNA_M-pyrifera_M_contig102573.560.1|Name=mRNA_M-pyrifera_M_contig102573.560.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig102573:219..551+ (Macrocystis pyrifera P11B4 male)
AAGAAGGAGGAAGAGCTGAGAGGGAGGACAGTGCGAGCTGGGTGGTTGTG
GAAGCAAGGGCATCAAGTGCGGAATTGGAGAAAGCGATGGTTTGTGTTGC
GTGGCAGTCGAATGAGCTATTTCTCTAAGCCCGAAGATGGACGGGAAAAA
GGCGCTGTGGATATCCTAGACTACTACCTGGTGCCTTCAGAAGTACCAAG
ACCGTCCGTGTCCATGCGTCTGTGCAACAAGCGCGTCGCAGGTACAGAAC
TCGACTACCTGATCCACAGCGAGACTGTGGAGGAGTTTGTGGCGTGGGTG
AAAGCCATTGCGAGCGTACAACGCGACTTTGAGAAGAAGGAGGAAGAGCT
GAGAGGGAGGACAGTGCGAGCTGGGTGGTTGTGGAAGCAAGGGCATCAAG
TGCGGAATTGGAGAAAGCGATGGTTTGTGTTGCGTGGCAGTCGAATGAGC
TATTTCTCTAAGCCCGAAGATGGACGGGAAAAAGGCGCTGTGGATATCCT
AGACTACTACCTGGTGCCTTCAGAAGTACCAAGACCGTCCGTGTCCATGC
GTCTGTGCAACAAGCGCGTCGCAGGTACAGAACTCGACTACCTGATCCAC
AGCGAGACTGTGGAGGAGTTTGTGGCGTGGGTGAAAGCCATTGCGAGCGT
ACAACGCGACTTTGAG
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