prot_M-pyrifera_M_contig10257.558.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig10257.558.1
Unique Name	prot_M-pyrifera_M_contig10257.558.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	174

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig10257.558.1 vs. uniprot
Match: D7G4K9_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 2.270e-72
Identity = 113/175 (64.57%), Postives = 146/175 (83.43%), Query Frame = 0

Query:    1 MGITSGLFRPLSIEWEKQPL-QVREEYVLAGLLIDLSLLDQYMFRFRPGTLASSALFLARVSAIFYSKEEVWVTPFAVVEKTNREVLRLHGDGVCRPFVEVDEEFEKRPFGAPGLGEFIASQPKEATAVRKCVERLWLVQQDFFKHVSGQPSPHPVLFSYQHMFKGIKVTFLAAG 174
            MG  SGL  PL+++WE+    ++REE++LAGL++DLSLLD ++F FRPGT+A++ALFLARV++++Y+KE +WVTP +VV K NREVLRL+G  VCRPFV+ +++ E RPFGAPGLGEF+ASQP EATAVR+CVERLWLVQ+DFF H+SG+ SP  VLF YQHMFKGIK  F+  G
Sbjct:  431 MGEPSGLDIPLTMDWEEHSHPRIREEHILAGLVVDLSLLDNFLFLFRPGTVAAAALFLARVTSMYYAKEGMWVTPCSVVAKKNREVLRLYGKDVCRPFVKPNKDLELRPFGAPGLGEFVASQPAEATAVRRCVERLWLVQRDFFDHLSGRQSPQHVLFRYQHMFKGIKEKFVPQG 605

[Close]

BLAST of mRNA_M-pyrifera_M_contig10257.558.1 vs. uniprot
Match: A0A6H5JEY8_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY8_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 7.020e-71
Identity = 113/175 (64.57%), Postives = 144/175 (82.29%), Query Frame = 0

Query:    1 MGITSGLFRPLSIEWEKQPL-QVREEYVLAGLLIDLSLLDQYMFRFRPGTLASSALFLARVSAIFYSKEEVWVTPFAVVEKTNREVLRLHGDGVCRPFVEVDEEFEKRPFGAPGLGEFIASQPKEATAVRKCVERLWLVQQDFFKHVSGQPSPHPVLFSYQHMFKGIKVTFLAAG 174
            MG  SGL  PL+++WE+    ++REE++LAGL++DLSLLD ++F FRPGT+A+SALFLARV+ ++Y+KE +WVTP +VV K NREVLRL+G  VCRPFV+ +++ E  PFGAPGLGEF+ASQP EATAVR+CVERLWLVQ+DFF H+SG+ SP  VLF YQHMFKGIK  F+  G
Sbjct:  556 MGEPSGLDIPLTMDWEEHSHPRIREEHILAGLVVDLSLLDNFLFLFRPGTVAASALFLARVTGMYYAKEGMWVTPCSVVAKKNREVLRLYGKDVCRPFVKPNKDLELLPFGAPGLGEFVASQPAEATAVRRCVERLWLVQRDFFDHLSGRQSPQHVLFRYQHMFKGIKEKFMPLG 730

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig10257.558.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig10257.558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G4K9_ECTSI	2.270e-72	64.57	Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6H5JEY8_9PHAE	7.020e-71	64.57	Cyclin N-terminal domain-containing protein n=1 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 28..61 e-value: 1.3E-4 score: 22.0
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 19..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig10257	contig	M-pyrifera_M_contig10257:1447..5993 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig10257.558.1	mRNA_M-pyrifera_M_contig10257.558.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig10257 1447..10319 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig10257.558.1 ID=prot_M-pyrifera_M_contig10257.558.1|Name=mRNA_M-pyrifera_M_contig10257.558.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
MGITSGLFRPLSIEWEKQPLQVREEYVLAGLLIDLSLLDQYMFRFRPGTL
ASSALFLARVSAIFYSKEEVWVTPFAVVEKTNREVLRLHGDGVCRPFVEV
DEEFEKRPFGAPGLGEFIASQPKEATAVRKCVERLWLVQQDFFKHVSGQP
SPHPVLFSYQHMFKGIKVTFLAAG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004367	Cyclin_C-dom
IPR036915	Cyclin-like_sf