mRNA_M-pyrifera_M_contig102561.555.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A7C7IWL5_9FLAO (HYR domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7C7IWL5_9FLAO) HSP 1 Score: 90.1 bits (222), Expect = 7.740e-19 Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 16 VEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 + D +G SCT VTV + +P+AVCQ T+ L A+G +L +D+DGGSSDNC I T+SL +TFT DV P VT+T+ D SGNS+SC+A VT+ Sbjct: 2094 ITDDSGNTSSCTAIVTVSEAIDPIAVCQDITVQLDATGTVTILPADVDGGSSDNCGIDTLSLDTDTFTCADV--GPNMVTLTVFDTSGNSSSCMAIVTV 2190
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A2D7VQL0_9FLAO (Uncharacterized protein (Fragment) n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D7VQL0_9FLAO) HSP 1 Score: 88.6 bits (218), Expect = 2.690e-18 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1 TQTGFVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 T T V DA+G +CT VTV D P A+CQ T+ L ASG A L+ SDIDGGS+DNC I +S SQ FT D+ P V +T+TD SGN++SC+A VT+ Sbjct: 2142 TVTLTVTDASGNTSTCTAMVTVEDVLPPTAICQDITLILDASGNASLIPSDIDGGSTDNCGIALLSASQTAFTCDDI--GPNDVILTITDDSGNTSSCIAIVTV 2243
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A2D8G0J2_9FLAO (Uncharacterized protein (Fragment) n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8G0J2_9FLAO) HSP 1 Score: 88.2 bits (217), Expect = 3.610e-18 Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 22 DAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 D G +C+ TVTV DT+ PVAVCQ T+PL A+G A + +D+DGGS DNCAI T+S+ +TF DV P VT+T+TD GN +SC+A VTI Sbjct: 958 DVNGNSSTCSFTVTVTDTTPPVAVCQDITVPLDATGNATITVADVDGGSFDNCAIDTISIDIDTFDCSDV--GPNDVTLTVTDIYGNVSSCIAVVTI 1052
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A6H9K341_FLASP (HYR domain-containing protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A6H9K341_FLASP) HSP 1 Score: 87.4 bits (215), Expect = 6.560e-18 Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 1 TQTGFVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 T T V D+ G +CT TVTV+DT+ P A+CQ TI L +G A + D+D GS+DNCAI T+S S TF ++ + +VT+T+TD SGNS+SCVA VT+ Sbjct: 77 TVTLTVTDSIGQTDTCTATVTVVDTTAPTALCQDITIQLDGNGNASITALDVDNGSADNCAIATLSASPNTFNCSNLGAN--SVTLTVTDTSGNSSSCVATVTV 178
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: UPI001BB69B2D (Tandem-95 repeat protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB69B2D) HSP 1 Score: 87.0 bits (214), Expect = 9.370e-18 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 16 VEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 V D G CT TVTV D +P A+CQ TI L ASG A + SDID GS+DNCAIT+VSLSQ +F V + +VT+T+TD +GN++ C+A VT+ Sbjct: 5 VTDENGNTDQCTATVTVEDNIDPTAICQDITIQLDASGNASISTSDIDNGSADNCAITSVSLSQTSFNCAHVGVN--SVTLTVTDSNGNTDQCIATVTV 101
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A0S8KJ66_9BACE (Uncharacterized protein (Fragment) n=2 Tax=unclassified Bacteroides TaxID=2646097 RepID=A0A0S8KJ66_9BACE) HSP 1 Score: 85.9 bits (211), Expect = 2.300e-17 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1 TQTGFVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 T T V D AGL + TVTVLD + P+AVCQ T+ L A+G A ++G+D+D GSSDNC I ++ +S F +V P VT+T+ D SGNSN+C + VT+ Sbjct: 12 TVTMTVTDVAGLTDVSSSTVTVLDVTPPIAVCQNITVQLDATGNATIIGADVDNGSSDNCGIVSMLVSPNAFDCTNV--GPNTVTLTVIDASGNSNTCTSIVTV 113
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A2S0HW07_9FLAO (Uncharacterized protein n=1 Tax=Pukyongia salina TaxID=2094025 RepID=A0A2S0HW07_9FLAO) HSP 1 Score: 85.1 bits (209), Expect = 4.340e-17 Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 1 TQTGFVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 T T V D+ G +CT TVTV+DT+ P+ +CQ TI L +G A + DID GSSDNC I ++S S TF ++ + +VT+T+TD SGNS+SCVA VT+ Sbjct: 77 TVTLTVTDSIGQTDTCTATVTVVDTTAPMVLCQDITIQLDGNGNASITALDIDNGSSDNCTIASLSASPNTFNCSNLGAN--SVTLTVTDSSGNSSSCVATVTV 178
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A7Y2Z499_9FLAO (HYR domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y2Z499_9FLAO) HSP 1 Score: 85.1 bits (209), Expect = 4.410e-17 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 22 DAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 D++G C+ T+TV D PVAVCQ TI L A+G A + SDIDGGS+DNC I ++S SQ F DV P VT+T+TD +GN ++C+A VT+ Sbjct: 2065 DSSGNTAVCSFTITVTDNEPPVAVCQDITIQLDANGMASITASDIDGGSTDNCGIASISASQTDFDCSDV--GPNNVTLTVTDDNGNVSTCIAVVTV 2159
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A6G6GP63_9FLAO (HYR domain-containing protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GP63_9FLAO) HSP 1 Score: 84.7 bits (208), Expect = 5.950e-17 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 13 FVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 V D G SC VTV+D NP+A+CQ T+ L A+G A + +D+DGGSSDNC IT +++ +TF V P V +T+TD SGNS+SC A VTI Sbjct: 1075 LVTDVNGNTNSCIAVVTVVDVENPLAICQDITVQLDATGTATVAAADLDGGSSDNCGITASTVNIDTFDCTMV--GPNTVVLTVTDGSGNSDSCTAVVTI 1172
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Match: A0A6M2AWA5_9FLAO (HYR domain-containing protein n=4 Tax=Aequorivita TaxID=153265 RepID=A0A6M2AWA5_9FLAO) HSP 1 Score: 84.3 bits (207), Expect = 8.070e-17 Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 19 EDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSDIDGGSSDNCAITTVSLSQETFTFVDVTRSPIAVTMTLTDQSGNSNSCVAQVTI 312 +D +C+ +VT+ DT P AVCQ ++ L ASG A + +D+DGGSSDNCAI T+S+S +FT D+ + VT+T+TD SGN+++CVA VT+ Sbjct: 1029 DDGINPIETCSFSVTINDTEAPTAVCQNISVQLDASGNATITAADVDGGSSDNCAIDTLSISTSSFTCADIGTNN--VTLTVTDASGNTSTCVAVVTV 1124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102561.555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102561.555.1 >prot_M-pyrifera_M_contig102561.555.1 ID=prot_M-pyrifera_M_contig102561.555.1|Name=mRNA_M-pyrifera_M_contig102561.555.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp TQTGFVEDAAGLRRSCTGTVTVLDTSNPVAVCQAATIPLAASGQARLLGSback to top mRNA from alignment at M-pyrifera_M_contig102561:231..542- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102561.555.1 ID=mRNA_M-pyrifera_M_contig102561.555.1|Name=mRNA_M-pyrifera_M_contig102561.555.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig102561:231..542- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102561:231..542- >mRNA_M-pyrifera_M_contig102561.555.1 ID=mRNA_M-pyrifera_M_contig102561.555.1|Name=mRNA_M-pyrifera_M_contig102561.555.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig102561:231..542- (Macrocystis pyrifera P11B4 male)back to top |