mRNA_M-pyrifera_M_contig102555.553.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A3C1KNJ1_9GAMM (DUF808 domain-containing protein n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KNJ1_9GAMM) HSP 1 Score: 398 bits (1022), Expect = 3.070e-138 Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNK ILVPAAVAIS+FAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL Sbjct: 22 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKAILVPAAVAISFFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A2N5XZ10_9GAMM (DUF808 domain-containing protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5XZ10_9GAMM) HSP 1 Score: 340 bits (871), Expect = 2.890e-115 Identity = 181/219 (82.65%), Postives = 200/219 (91.32%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTK ATKKTAGVLGDDLALNAQQV+GV+PARELPVVWAVAKGS +NKTILVPAAVAIS+F PWL+TPLLMLGGAFLCFEGFEK+ H+FLHR E +AH LR ALK+P+ DLR +E+ KIKGAIRTDFILSAEIIAITLGTVA E+IGMQFLVLSVVAIMITV VYGLVAGIVKLDDGGLYLS ++S LAQK G GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKAATKKTAGVLGDDLALNAQQVSGVKPARELPVVWAVAKGSFLNKTILVPAAVAISFFVPWLVTPLLMLGGAFLCFEGFEKLVHKFLHREEAQAHRHELREALKNPEADLRILEKNKIKGAIRTDFILSAEIIAITLGTVAGESIGMQFLVLSVVAIMITVVVYGLVAGIVKLDDGGLYLSRKDSELAQKAGRGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A1D9GQE9_9GAMM (Uncharacterized protein n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GQE9_9GAMM) HSP 1 Score: 338 bits (867), Expect = 1.170e-114 Identity = 180/219 (82.19%), Postives = 200/219 (91.32%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTKTATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS VNK ILVPAAVAIS+F PWL+TPLLMLGGAFLCFEGFEK+AH+FLHR E +AH L+AALK+P+ DL+A+E+ KIKGAIRTDFILSAEIIAITLGTV E IG+QFLVL+VVAIMITV VYGLVAGIVKLDDGGLYLS ++S LAQK G GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKTATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSFVNKAILVPAAVAISFFVPWLVTPLLMLGGAFLCFEGFEKLAHKFLHREEDQAHKSELKAALKNPEADLKALEKDKIKGAIRTDFILSAEIIAITLGTVTGETIGIQFLVLAVVAIMITVVVYGLVAGIVKLDDGGLYLSQQDSELAQKMGRGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: UPI001C6303C5 (DUF808 family protein n=4 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001C6303C5) HSP 1 Score: 338 bits (866), Expect = 1.780e-114 Identity = 178/219 (81.28%), Postives = 201/219 (91.78%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTKTATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGSL+NK ILVPAA+AIS+F PWL+TPLLMLGGAFLCFEGFEK+ H+FLHR E EAH L ALK+P VD++A+E++KIKGAIRTDFILSAEIIAITLGTV ++IGMQFLVL+VVAIMITVGVYGLVAGIVKLDDGGLYLS R+S ++QK G GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKTATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSLLNKAILVPAALAISFFVPWLVTPLLMLGGAFLCFEGFEKLVHKFLHRQEDEAHKSELHEALKNPDVDMKALEKEKIKGAIRTDFILSAEIIAITLGTVTDQSIGMQFLVLTVVAIMITVGVYGLVAGIVKLDDGGLYLSQRDSEVSQKIGRGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A366GXM9_9GAMM (Uncharacterized protein n=3 Tax=Marinobacter pelagius TaxID=379482 RepID=A0A366GXM9_9GAMM) HSP 1 Score: 335 bits (859), Expect = 2.280e-113 Identity = 177/219 (80.82%), Postives = 196/219 (89.50%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTK ATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS VNK ILVPAAVAISYF PWL+ PLLMLGGAFLCFEGFEK+AH+FLH E +AH Q L ALK+P VDL+ VE+ KIKGAIRTDFILSAEIIAITLGTV + IGMQFLVL+VVA+M+TVGVYGLVAGIVKLDDGGLYLS ++S LAQ+ G GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKAATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSFVNKAILVPAAVAISYFVPWLVIPLLMLGGAFLCFEGFEKLAHKFLHGKEDDAHKQELHEALKNPDVDLKVVEKDKIKGAIRTDFILSAEIIAITLGTVTGQGIGMQFLVLTVVAVMVTVGVYGLVAGIVKLDDGGLYLSQKDSGLAQRLGEGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: UPI001CBF57D6 (DUF808 domain-containing protein n=1 Tax=Marinobacter sp. F4216 TaxID=2874281 RepID=UPI001CBF57D6) HSP 1 Score: 333 bits (855), Expect = 7.810e-113 Identity = 178/219 (81.28%), Postives = 196/219 (89.50%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTKTATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS+ NK ILVPAA+AIS+F PWL+TPLLMLGGAFLCFEGFEKIAH+FLHR E AH + L ALK+P+VD+RA+EQ KIKGAIRTDFILSAEIIAITLGTV + IGMQF VL+VVAIMITVGVYGLVAGIVKLDDGGLYLS +E A Q G GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKTATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSMKNKAILVPAALAISFFVPWLVTPLLMLGGAFLCFEGFEKIAHKFLHREEDAAHKKDLHEALKNPEVDMRALEQDKIKGAIRTDFILSAEIIAITLGTVTDQTIGMQFAVLTVVAIMITVGVYGLVAGIVKLDDGGLYLSQKEGAFTQAIGRGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: R8B423_9GAMM (Membrane protein n=2 Tax=Marinobacter TaxID=2742 RepID=R8B423_9GAMM) HSP 1 Score: 332 bits (852), Expect = 2.230e-112 Identity = 173/219 (79.00%), Postives = 199/219 (90.87%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTKTATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS++NK ILVPAA+AIS+F PWL+TPLLMLGGAFLCFEGFEK+AH+FLH+ E + H L ALK+P VD+++VE+ KIKGAIRTDFILSAEIIAITLGTV + GMQF+VL+VVA+MITVGVYGLVAGIVKLDDGGLYLS R+SA+AQ G+GILWLAP++M+TLS+LGTIAMFL Sbjct: 22 LMTKTATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSMINKAILVPAALAISFFVPWLVTPLLMLGGAFLCFEGFEKLAHKFLHKQEDDEHKAELHEALKNPDVDMKSVEKDKIKGAIRTDFILSAEIIAITLGTVTTQTFGMQFMVLTVVAVMITVGVYGLVAGIVKLDDGGLYLSRRDSAMAQWMGNGILWLAPYMMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A2A5LX27_9GAMM (Uncharacterized protein n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=A0A2A5LX27_9GAMM) HSP 1 Score: 331 bits (849), Expect = 6.830e-112 Identity = 176/219 (80.37%), Postives = 198/219 (90.41%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTK ATKKTAGVLGDDLALNAQQV+GV+PARELPVVWAVAKGS++NK ILVPAAVAIS+FAPWL+TPLLMLGGAFLCFEG EK+AH+FLH E E H + LR AL P DL+ +E++KIKGAIRTDFILSAEIIAITLG V E+IGMQF+VL+VVA+MIT+ VYGLVAGIVKLDDGGLYLS RESA+AQKTG GILWLAP+LM+TLS+LGTIAMFL Sbjct: 22 LMTKAATKKTAGVLGDDLALNAQQVSGVKPARELPVVWAVAKGSMINKAILVPAAVAISFFAPWLVTPLLMLGGAFLCFEGAEKLAHKFLHAKEDEQHRKELREALIQPGTDLKVLEKQKIKGAIRTDFILSAEIIAITLGVVTGESIGMQFVVLAVVAVMITICVYGLVAGIVKLDDGGLYLSQRESAIAQKTGRGILWLAPYLMKTLSILGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: A0A4V6Y706_9GAMM (DUF808 domain-containing protein n=2 Tax=Marinobacteraceae TaxID=2887365 RepID=A0A4V6Y706_9GAMM) HSP 1 Score: 330 bits (845), Expect = 2.590e-111 Identity = 174/219 (79.45%), Postives = 195/219 (89.04%), Query Frame = 1 Query: 1 LMTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 LMTK ATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS++NK ILVP A+AIS+F PWL+ PLLMLGGAFLCFEGFEK+AHRFLH+ E E H L ALKDP DLR+VE+ KIKGAIRTDFILSAEIIAITLGTV+++A G QFLVL+VVA+M+TVGVYGLVAGIVKLDDGGLYLS +ES +AQ+ G GILWLAP +M+TLSVLGTIAMFL Sbjct: 22 LMTKAATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSMINKAILVPGALAISFFVPWLVIPLLMLGGAFLCFEGFEKLAHRFLHKQEVEKHQAELHEALKDPDADLRSVEKDKIKGAIRTDFILSAEIIAITLGTVSSQAFGTQFLVLTVVAVMVTVGVYGLVAGIVKLDDGGLYLSKKESLIAQRVGEGILWLAPWMMKTLSVLGTIAMFL 240
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Match: W5YLD2_9GAMM (Membrane protein n=4 Tax=Marinobacter TaxID=2742 RepID=W5YLD2_9GAMM) HSP 1 Score: 328 bits (842), Expect = 3.500e-111 Identity = 174/218 (79.82%), Postives = 197/218 (90.37%), Query Frame = 1 Query: 4 MTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILVPAAVAISYFAPWLITPLLMLGGAFLCFEGFEKIAHRFLHRNEQEAHAQALRAALKDPQVDLRAVEQKKIKGAIRTDFILSAEIIAITLGTVAAEAIGMQFLVLSVVAIMITVGVYGLVAGIVKLDDGGLYLSGRESALAQKTGHGILWLAPHLMRTLSVLGTIAMFL 657 MTKTATKKTAGVLGDDLALNAQQV GV+PARELPVVWAVAKGS++NK ILVPAA+AISYF PWL+ PLLMLGGAFLCFEGFEK+AH+FLHR E EAH + L ALK+P VD++ +E+ KIKGAIRTDFILSAEIIAITLGTVA E+IGMQFLVL+VVAIMITV VYGLVAGIVKLDDGGLYLS +++ QK G GILWLAP++M+TLS++GTIAMFL Sbjct: 1 MTKTATKKTAGVLGDDLALNAQQVTGVKPARELPVVWAVAKGSMLNKAILVPAALAISYFVPWLVVPLLMLGGAFLCFEGFEKLAHKFLHRQEAEAHKKELHEALKNPGVDMKELERDKIKGAIRTDFILSAEIIAITLGTVAGESIGMQFLVLAVVAIMITVVVYGLVAGIVKLDDGGLYLSQQDNEAVQKVGRGILWLAPYMMKTLSIVGTIAMFL 218 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102555.553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102555.553.1 >prot_M-pyrifera_M_contig102555.553.1 ID=prot_M-pyrifera_M_contig102555.553.1|Name=mRNA_M-pyrifera_M_contig102555.553.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp MTKTATKKTAGVLGDDLALNAQQVAGVRPARELPVVWAVAKGSLVNKTILback to top mRNA from alignment at M-pyrifera_M_contig102555:2..658- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102555.553.1 ID=mRNA_M-pyrifera_M_contig102555.553.1|Name=mRNA_M-pyrifera_M_contig102555.553.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig102555:2..658- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102555:2..658- >mRNA_M-pyrifera_M_contig102555.553.1 ID=mRNA_M-pyrifera_M_contig102555.553.1|Name=mRNA_M-pyrifera_M_contig102555.553.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig102555:2..658- (Macrocystis pyrifera P11B4 male)back to top |