mRNA_M-pyrifera_M_contig12746.5530.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12746.5530.1
Unique NamemRNA_M-pyrifera_M_contig12746.5530.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: D7G1E8_ECTSI (Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1E8_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.580e-78
Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            QVAARL LGLLCWL FRRFN+AVA +FG+A A   A VW+LQFHLPFY+SRTLPN FALCVVLLAL AWL D +PR LGL T+AT+VFRCDVVVLL PLTLQLLLT RV P+ V++ GL W IPS++ S  +DS +W RW+WPE QVLLFNTV NRSSEWGEMP YW
Sbjct:   96 QVAARLALGLLCWLAFRRFNSAVAFRFGDAPAGWAAGVWALQFHLPFYMSRTLPNVFALCVVLLALQAWLRDNVPRALGLFTVATLVFRCDVVVLLGPLTLQLLLTGRVRPLEVITAGLMWGIPSLVASFLLDSALWGRWVWPESQVLLFNTVANRSSEWGEMPFYW 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A836CMI6_9STRA (Mannosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI6_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.900e-56
Identity = 103/167 (61.68%), Postives = 119/167 (71.26%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            QVAARL LGLL WL FR +N  VA  FG  AAA  A V +LQFHLP+Y+SRTLPNA ALCVVL+ALG WL  R  R LGLLT AT +FRCDV++LL PL LQ LL RRV     V TG+     ++L++V VDS  W RWLWPEG+V  FNTV N+SSEWG  P +W
Sbjct:   95 QVAARLCLGLLSWLAFRHYNTGVARCFGSDAAAGTALVTALQFHLPYYMSRTLPNALALCVVLVALGQWLRGRSLRALGLLTAATALFRCDVLLLLGPLALQELLARRVTFSAGVRTGMLAGALTLLLTVPVDSYFWQRWLWPEGEVFWFNTVRNKSSEWGTSPWHW 261
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A1V9YZ50_9STRA (Mannosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ50_9STRA)

HSP 1 Score: 154 bits (390), Expect = 9.290e-42
Identity = 84/167 (50.30%), Postives = 108/167 (64.67%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            Q+ ARL L LL +  +     AV   FG   A   + V ++QFHL FY+SRTLPN FAL +VLLA  AW+  R    + LL+ +TVVFR D  VL AP+ L LL+TR+VG +  + TGL  A+ S+ ++V VDS  W RWLWPEG+VL FNTV N+S EWG  P +W
Sbjct:   80 QIGARLCLWLLSFTAWCYMKRAVGRVFGRDTAVAFSLVTAVQFHLVFYMSRTLPNIFALALVLLAYTAWIESRPRHVIVLLSFSTVVFRGDTAVLFAPILLTLLVTRQVGFVETIVTGLMSALVSLGLTVGVDSFFWQRWLWPEGEVLWFNTVLNKSHEWGTQPFHW 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A067C068_SAPPC (Mannosyltransferase (Fragment) n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C068_SAPPC)

HSP 1 Score: 154 bits (388), Expect = 1.850e-41
Identity = 79/167 (47.31%), Postives = 110/167 (65.87%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            QVAAR  L LL +  +R     + + FG   A   + V ++QFHL FY+SRTLPN FAL +VLLA  AW+  +  R + LL+++T++FR D  VL AP+ L LL  R VG + +V+TG+  A+ ++ ++V VDS  W RWLWPEG+VL FNT+ N+S EWG  P +W
Sbjct:   80 QVAARASLWLLSFGAWRTLKRTIGSVFGSDTAVAYSLVTAVQFHLVFYMSRTLPNIFALILVLLAYAAWMQHQPRRVIVLLSISTIIFRGDTAVLFAPILLTLLFARHVGFVEMVATGVTAALSALALTVGVDSAFWQRWLWPEGEVLYFNTILNKSHEWGTHPFHW 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A0P1A5W6_PLAHL (Mannosyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5W6_PLAHL)

HSP 1 Score: 153 bits (387), Expect = 5.570e-41
Identity = 78/167 (46.71%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            Q+  R VLGL+       F+ +V  ++G   +  +  + + QFHL FY++RTLPN +AL +VL  LG WL  ++P T+ L T ATVVFR D V+L APL L +LL+R +    +V  GL   I S+ ++V +DS  W RWLWPEG+VL FNT++NRSSEWG  P  W
Sbjct:  115 QLVTRWVLGLMTLSGLFFFSDSVGMRYGRDVSRFLLLICACQFHLLFYMTRTLPNVYALALVLFGLGFWLRRKLPYTISLFTFATVVFRGDTVLLFAPLVLSMLLSRHISVFQIVKWGLLAGIVSLFITVTIDSFFWKRWLWPEGEVLWFNTIENRSSEWGVSPPLW 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: W2PCN2_PHYPN (Mannosyltransferase n=13 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PCN2_PHYPN)

HSP 1 Score: 150 bits (378), Expect = 6.710e-41
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            QVA R VLG++       F+  V  +FG   +  +  + + QFHL FY++RTLPN +AL +VLL LG WL  +  R + L T  TVVFR D +VL APL L +LL+RRV    +V  GL   I S++++V VDS  W RWLWPEG+VL FNTV N+SSEWG  P  W
Sbjct:   94 QVATRWVLGMMTLGSLVFFSDGVGMRFGRDVSRFLLLICACQFHLLFYMTRTLPNVYALALVLLGLGFWLRGKWQRCVFLFTFTTVVFRGDTIVLFAPLVLNMLLSRRVSFFRMVWWGLSSGIVSLILTVLVDSYFWRRWLWPEGEVLWFNTVQNKSSEWGVSPPLW 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A5J4XFB6_9CHLO (Mannosyltransferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XFB6_9CHLO)

HSP 1 Score: 151 bits (381), Expect = 1.010e-40
Identity = 81/165 (49.09%), Postives = 109/165 (66.06%), Query Frame = 1 
Query:   13 RLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTL-GLLTLATVVFRCDVVVLLAPLTLQLLLTRRVG-PIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            RL+LG +CWL   R   A+  ++G   A     V ++QFHLPFY+SRTLPN FAL V+ LA+  W+  + PR L  LL +AT+VFRCD++ L   + L +LLT+++  P G++ TG   A  S+ ++V VDS  W RWLWPEG+VL FNT  NRS EWG MP +W
Sbjct:   95 RLMLGSICWLAMCRIQQALRKQYGTTCAKAFMLVTAMQFHLPFYMSRTLPNTFALAVLGLAIADWIEGQHPRRLVSLLAVATIVFRCDMLPLAGLVGLHMLLTKQISIPAGLL-TGAVAAAISLGMTVVVDSWFWQRWLWPEGEVLWFNTAQNRSGEWGTMPFHW 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: H3GJB8_PHYRM (Mannosyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJB8_PHYRM)

HSP 1 Score: 151 bits (381), Expect = 1.870e-40
Identity = 83/167 (49.70%), Postives = 105/167 (62.87%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            QVA R VLG+        F+  V  +FG   +  +  + + QFHL FY+SRTLPN +AL +VL  LG WL D+  R++ L T ATVVFR D +VL APL L +LL+RRV    +V  GL   I S+  +V VDS  W RWLWPEG+VL FNTV N+SS+WG  P  W
Sbjct:   77 QVATRWVLGMATLGALVFFSDGVGMRFGRDTSRFLLLICACQFHLVFYMSRTLPNVYALVLVLFGLGFWLRDKWQRSVFLFTFATVVFRGDTIVLFAPLVLSMLLSRRVSFFKMVWWGLSAGIVSLAATVLVDSYFWQRWLWPEGEVLWFNTVQNKSSDWGVSPPLW 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: T0RZ08_SAPDV (Mannosyltransferase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RZ08_SAPDV)

HSP 1 Score: 150 bits (380), Expect = 2.090e-40
Identity = 76/167 (45.51%), Postives = 109/167 (65.27%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWGEMPIYW 501
            Q+AAR  L LL +  +R     + + FG   A   + + ++QFHL FY+SRTLPN FAL +V LA  AWL  +  R + LL+++T+VFR D  VL AP+ + LL+ R VG + +V  G+  A+ ++ +++ VDSV W RWLWPEG+VL FNT+ N+S EWG  P +W
Sbjct:   80 QIAARASLWLLSFTAWRTLKRTIGSVFGRDTAVAYSLLTAVQFHLVFYMSRTLPNIFALILVFLAYAAWLQGQSRRVIMLLSVSTIVFRGDTAVLFAPILVTLLVARHVGFLEMVMVGVTSALGAIALTIGVDSVFWQRWLWPEGEVLYFNTILNKSHEWGTHPFHW 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Match: A0A3R7GZX0_9STRA (Mannosyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GZX0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.110e-40
Identity = 81/161 (50.31%), Postives = 105/161 (65.22%), Query Frame = 1 
Query:    1 QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLSRTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLTLQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLFNTVDNRSSEWG 483
            Q  +R VLG+L       F+  V  +FG   +  +  + + QFH+ FY+SRTLPN +AL +VL ALG WL  ++ R + L T ATVVFR D VVL APL L +LL+RRV    +V  GL   + S+L++V VDS  W RWLWPEG+VL FNTV N+SSEWG
Sbjct:   92 QYISRWVLGMLTLSALVFFSDGVEKRFGRDTSRFLLLICACQFHMMFYMSRTLPNVYALALVLFALGFWLRGKLQRCVYLFTFATVVFRGDTVVLFAPLVLNMLLSRRVSFFRMVWWGLSAGVLSLLMTVLVDSYFWQRWLWPEGEVLWFNTVQNKSSEWG 252
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12746.5530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1E8_ECTSI1.580e-7873.05Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A836CMI6_9STRA8.900e-5661.68Mannosyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
A0A1V9YZ50_9STRA9.290e-4250.30Mannosyltransferase n=1 Tax=Achlya hypogyna TaxID=... [more]
A0A067C068_SAPPC1.850e-4147.31Mannosyltransferase (Fragment) n=2 Tax=Saprolegnia... [more]
A0A0P1A5W6_PLAHL5.570e-4146.71Mannosyltransferase n=1 Tax=Plasmopara halstedii T... [more]
W2PCN2_PHYPN6.710e-4149.10Mannosyltransferase n=13 Tax=Phytophthora parasiti... [more]
A0A5J4XFB6_9CHLO1.010e-4049.09Mannosyltransferase n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
H3GJB8_PHYRM1.870e-4049.70Mannosyltransferase n=1 Tax=Phytophthora ramorum T... [more]
T0RZ08_SAPDV2.090e-4045.51Mannosyltransferase n=1 Tax=Saprolegnia diclina (s... [more]
A0A3R7GZX0_9STRA4.110e-4050.31Mannosyltransferase n=3 Tax=Phytophthora kernoviae... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12746contigM-pyrifera_M_contig12746:142..7383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.3
Seed ortholog evalue1.6e-64
Seed eggNOG ortholog2880.D7G1E8
Preferred nameALG12
KEGG rclassRC00055,RC00523
KEGG koko:K01873,ko:K03847,ko:K11349,ko:K20471
KEGG ReactionR03665,R06260
KEGG Pathwayko00510,ko00513,ko00970,ko01100,map00510,map00513,map00970,map01100
KEGG ModuleM00055,M00359,M00360
Hectar predicted targeting categorysignal peptide
GOsGO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006457,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006508,GO:0006511,GO:0006629,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0031224,GO:0031984,GO:0033554,GO:0034645,GO:0034976,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0052824,GO:0070085,GO:0071704,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698
EggNOG free text desc.dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity
EggNOG OGsKOG2516@1,KOG2516@2759
EC2.4.1.260,6.1.1.9
COG Functional cat.M
CAZyGT22
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01007,ko03016,ko03036,ko04131
Exons4
Model size504
Cds size504
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12746.5530.1prot_M-pyrifera_M_contig12746.5530.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12746 142..7383 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815788.9022293-CDS-M-pyrifera_M_contig12746:141..3421622815788.9022293-CDS-M-pyrifera_M_contig12746:141..342Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 142..342 +
1692277570.2156289-CDS-M-pyrifera_M_contig12746:141..3421692277570.2156289-CDS-M-pyrifera_M_contig12746:141..342Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 142..342 +
1622815788.9131541-CDS-M-pyrifera_M_contig12746:1275..13941622815788.9131541-CDS-M-pyrifera_M_contig12746:1275..1394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 1276..1394 +
1692277570.230081-CDS-M-pyrifera_M_contig12746:1275..13941692277570.230081-CDS-M-pyrifera_M_contig12746:1275..1394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 1276..1394 +
1622815788.9264073-CDS-M-pyrifera_M_contig12746:5276..53721622815788.9264073-CDS-M-pyrifera_M_contig12746:5276..5372Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 5277..5372 +
1692277570.2419093-CDS-M-pyrifera_M_contig12746:5276..53721692277570.2419093-CDS-M-pyrifera_M_contig12746:5276..5372Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 5277..5372 +
1622815788.937221-CDS-M-pyrifera_M_contig12746:7295..73831622815788.937221-CDS-M-pyrifera_M_contig12746:7295..7383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 7296..7383 +
1692277570.2514-CDS-M-pyrifera_M_contig12746:7295..73831692277570.2514-CDS-M-pyrifera_M_contig12746:7295..7383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12746 7296..7383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12746.5530.1

>prot_M-pyrifera_M_contig12746.5530.1 ID=prot_M-pyrifera_M_contig12746.5530.1|Name=mRNA_M-pyrifera_M_contig12746.5530.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
QVAARLVLGLLCWLCFRRFNAAVAAKFGEAAAACVAAVWSLQFHLPFYLS
RTLPNAFALCVVLLALGAWLGDRIPRTLGLLTLATVVFRCDVVVLLAPLT
LQLLLTRRVGPIGVVSTGLKWAIPSVLVSVAVDSVMWARWLWPEGQVLLF
NTVDNRSSEWGEMPIYW*
back to top

mRNA from alignment at M-pyrifera_M_contig12746:142..7383+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12746.5530.1 ID=mRNA_M-pyrifera_M_contig12746.5530.1|Name=mRNA_M-pyrifera_M_contig12746.5530.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7242bp|location=Sequence derived from alignment at M-pyrifera_M_contig12746:142..7383+ (Macrocystis pyrifera P11B4 male)
CAGGTCGCCGCCCGCCTTGTTCTTGGCCTCCTGTGCTGGCTGTGCTTTCG
GCGGTTTAACGCGGCGGTGGCGGCGAAGTTCGGGGAAGCTGCGGCGGCCT
GCGTTGCCGCGGTGTGGTCGCTGCAGTTCCATCTGCCTTTCTACCTTAGC
CGGACCCTGCCCAATGCTTTCGCGCTGTGCGTGGTTCTTCTGGCGCTCGG
GGTGAGAAGAGTGGGTTGGGGTGGGTTGGGATCGGGTGGGGTCGTGTGGA
GTGGGATCGGGTGGAGTCGGGTGGGGCAGAGTGGGGTGGGGTGGAGTGGT
GTGAGAGGAGGGAAGCGGATTGGGTGGAGGGTGGGAGGTCGGGTGGAACG
GGGTGGGGTCGGGTGGGGTGGGAGGTGGGGTAGGGCGGGGTAAGGTGGGG
GTTGCTTCTCTTGCCGATCTTAATTCTGCTGCTGCTGCTGGTCCTGTCGT
CGCTGCGGCTGTTGCTGCTGTTACTGCGGCTACGTCTTCTGCTGCTGCTG
TTGCAGTGTTGCTTCATCTACGCGCTTTTTTAGGCGTTACTTACTTCTCC
CCCACCCCACCCATAGACCGGTTACTAGAGACCTGCACTGGACCGAAGCG
TTCGAGTTATCGCGCTATAGTCACCCTTGTACGTGTTTTGCATTGAGTCT
TCGTCTGAATACTATATTGTATTACTGTTCTTCTGGTTTCCTTGTGTTCT
CGAAGCCTTGCCTTGTGAACCCACGGACGAAAAATTGCCAAAGAGGCATT
TTGGCAACGAGTTCATGCAAAATAAACAGCCAGCAACAGCACCTCCTCCC
TACCCTTTCCCATCCCATCCCACCCCACCCCACCCCACCCCACGCTAGCC
CATCACGCCACCACGCCCACCCCCACCCAAGTTCACCGCCATACAACACG
GCGCAGATCCCCAAAATCCCTTCGAGGCCTTGTTCTTGTACTATTACGGG
GGACCATATTAAATAAGACCTACGTACACACAAGACCTATATATTTCGCT
ATTTATGCTGACAATATTTGGTCCTATTTACTATGGCCCCCCCGTAATAC
AACTATCCTGACACGCCCCACCCCATCCCCTATCTCACTGTTGTTTCGAT
AACGCCCTTTTTTCGGACACGAAACCCCGCGCAGGCTTGGCTTGGGGACA
GAATTCCGAGGACACTGGGGCTGCTCACGCTAGCCACCGTCGTGTTCCGG
TGCGATGTGGTGGTGCTGCTTGCACCCCTTACACTGCAGCTCCTTCTGAC
CAGGTGCCAACATCGTAGGGGACAGGCAGGGGGGTGGGGCGAAGGATATC
ACAGCGAAGAGGGGGGGGGGGGGGGGGGGGGGACCCGGGGTTGGGGGGGG
GGGGGTGGTTTTTGTGGGGGGTTTTTTGGGGGTTTTGCGGTTTCCCCGTG
TGTGGGTCTGGGGGGATTTCCCCNNNNNNNNNNGGGGGGGCTGCTGCGCC
CCCCTACCCCGGGACGCCGTTCGCCCCAGGCGCAAGGCCAGGGGGGGCAG
GGGGGGGGGGGGGGGGGAGGATTATACCGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGTGACCCCGGGTTTCGGGTGGTGTAGTCGTTTATTGAGTCGG
TCTTTGTAGACGTTCTGCAGTTTCCGCTAGTGTGCTACTGCGGTGCTATC
CCCCAGCTGTATATGACGGCGTCTCCGGTGGCTTGGTAGGTGATCCGTGT
GAATTACGAAGACTTGTTTCTCGGGGGTTCGAGCTTCACCGAGTACACGT
ATACTCGTAACGGCTTTTCTTGCTTTATAAATGGTTGGGCGGGAGTCACG
AAAGCGTGAGTTTGCAACACTCGATGGAGAACAGTGGGAATGCTGAATGG
ACCCTACCTATGCGCGATAAGAATGAAGGCACGCGCCGGGGGGGGAGAAG
GGACAACACCTGTGTTCATGACTCGTCCACAGGATCGCTGAGGGTAAACT
CTCTCACCACGGGTTTGGTGCCGTGCTCCCGTTTCGGGGACGAATTACTT
GCAATATGAGTGGTTTGTCCACATATCGGGACTGCAGTTTGCCTTGCAAG
GGTTAACCTGGAAGGTGTAAGTGATGATAAAAATGAATAAATATATAGAA
TTAGATACCAGCACGGCAACTCCATTTTTGACCGCTTCGGTGGTGCGCTG
TTTTCTTTTTTCGTATCACGGGGGACCATAGTAAATAGGACCAAATATTA
TTAGCAAAAATTGGGAAATGTGTAGGTTTTTTGTGTGTACCGTAGGTCCT
GTTTACTAGGGTCCCCCGTAATAGCATGCTGTGCTGCTGCTGCTGCCGCT
GCCGCTGCTGTCAAGCCGCTTCACGGTCATGAGACGAAAGCGCTACTATT
GCGGGGGTCCATAGTTAATAGGACATATGGTTACATAAAAAACCTATATA
TTTTACCTATTTTTACGAACACTACTTGGTCCTATTTACAATGATCCCCC
GTGATAGCTTAGGTTTTAACTCGTCAAGACATTCTCCATGAATGCATCTA
TCTCTTGGCGGTTGCACTTTCCTCGTTTTGCCGAGAAAAAATCACCTTGG
AAACTTCCCCGGCCCGGCTTAGGGCATGTGTTGTCTTGCTTGTTGTGCGA
CTCTTGCATGTACCTAATTATTCAGTACGGGCGCGGGTTGCCCATCGCCT
TGCCTGGGGGTGCCATCGGCTTTCAGCTCTCGTTCTCCCTCAACCTTCAT
CATTAAGGAAGGGTGCAAAATTTAGTAGAAAGTTATATATAATCGGATGT
GACTGCTGTTATACCAAATATTTCCGAAAATGCCTTTGGTTTGGTGTTGG
GAAAACCAACCGTTTCCCGTTCTGGAGAAAGAAATGGGCGCTTAAAAATA
ATCATCTCACCCCTGTGCGATAAGTAACCCGCGTTCCTTAAGGTAATGCG
ACCACCGCTGGTGTATTAGATTCCGTGCGTTCGAGGGGTCCCTCCTTGAC
TCTCGCCGCACCACACCAATAGGGAAAATCGCACTGTTGAAATAAAAAAC
CTGAGGGTATTTTTTTTTGTGTTTATCGCTCAGCTTTTTTGAAAAGATAT
ACATATATCTATACACCTGTTCTCATAGTTTTTTTTTGTTTTTGTCGATC
CTTTCTGTTTTAATCGTATCAAAGCGAGTCTGTTTCTCATCGTACGAGAG
TGAGCCGTGCTTCTATGGAACGTATATAGGGAGTTGTCGTTGCGAGGGAG
GTTGTGCAAAATCTCCATCTGGATAGTACAGATCCAACCCAGGAAACAAT
GTGCTGGAGAACGCAGATTTTTCGGATCCGACCCTGCAGCATGAGCGAGA
TTCTCGCAGATCAGCGCAATATCTTCTTGGAAATATCTGCAGTAGATCAT
GGAGTGGGAATGATTTGGAGATGACCTACCTGTAGGGGATGTGTGGATGA
TCTGTAGATGATCTGAAAATGAATTGTTGATCGTCTGTCAATGGACTGTC
CGAATGGTTGATAATTTCGTTGCGACCCCTACCTTGCACCTCTGGCGTGT
GCGTGAATGTGTGTGTTTTATGTCAACTCTGTGTATACTTGTTTGTTTTG
TTTTCCACCATTTATGCTTTGATTAATATTTAATATCCTTAATTTTGGCG
CTAAACCTTCGTTAAATCGTTGGTGTGTCGGTGTGTGGGGTTTTGAGTTT
CTTCATGTTTTTTTCTTTTTCATAATTGTTATGTTCTTGTTGCATTTTGT
TTTTCAGGGCTGTGAACAGGCTGTGTTAACCGCTATATTGAAACGCCGGT
TATCGGCGCGAATCGATATCTCCGACGTTTGCGTGCGACTGAACCCATTG
CTCTGAATCCTTCTTTTATAACACCATGTGGGTGAATCCTGGTAAATTTT
ATTCATGCGAATCGGGACGATGTCTTCCCGATGTGTTTCCGATGTTTTTT
CTTGTCGGTTAAACAAAAGCGTCCTGATTTGCCGATTCCGATTCTGACTA
AAATCGCTTTTTTTTTACTTGGGTGATTTTTTTGCGCAGTTCTCAACGTG
GGATGTTGCACTGCTGTAGAGCTCCTCAGTCAAATTCCACATGTTTTGTC
CCCAAAACGGGACTGGAGTTCAAATTAAAGGGTTAGGTGCCTGAACAAAG
TTTAGCTGCCGTACACAGTAGGTAACCTCTTTTAAGAGACCCTTTTTAGC
CCCCTTAAGGGGTACTTTTAGCTGTATTGGTGTGTTGGGGGGGATGCCAC
ATGGTGAACCCTTTGAGGACTGCAGTCCCGTTTTGAGGACAAGCAACTCT
AGTTCTAAGTACTTTATCCCCGGAATGAGACTGCGGTCCTAAAAGGTCGT
ATAGCTGTTGCTGGTACGTACCACTCCGTCCCTTAATATATGTAGCATTT
GTATACTAATATTCAATATAAACGGTCATTATATTTAGGACACTCTGTCC
CTTAATATAAGTACCGTTTGTATACTGGCATTCAATATGCACGATCCACA
TATTTAGGCACAGAGAAAATTCGAAACACAGACTGGTGGCCTCTTTTGGC
ATTATTGCACTGGCTTATACTTTTTCAGCGGTACTAGAGCACTGTTACGG
GGGAGCACAGTAAATAGGACCAGATATTGTCAGTAAAAATAGGTAAGTAT
ATAGGTTTTTGTGCGTACCGTAGGTCCTACTTACTATGGCCCCCCGTGAT
ATTGCAGTGGTCGTTCTTCAAGTGCGGATAGCCCGCTCCAGTAGTGCCGG
TGAAATCGTTCCGCGTACCCAGTACGATGGCATGGCGTTGCATGCCTTGC
ATGCCTTGTCTGCCTTGTCTGCCTTGTCTGCTCTCCTTGCTGCGTTTTGA
TGCAGTGTATCTCTCTCTGTGTCGTGGTTTTGTGACCGCAGAGCTTGTGT
CTTGTCTCTAGAATGGAGAAACGGCACGGATACTGGGCGTGCTGGATGTC
GACGGCCAGAAAGAACGCTATGATTGGACGTGAAGAACTTACACACGCAC
ACTCCATTTTCTTTTCATGTTCTTGGGTTCCGTTTTTGTTGTTGCATCTG
TTTTTTGTCGTTATGTTTCGCCCTCTTTTTTTTCATTTTTCTGTTTCGTC
GTTGTCGTCTTCGCGGGGTCTGTTTTTTTGTTTTTTTTTTCGTCAATTTT
TTGTCAATTTTGTTTTTGCTGCACCGATCGAGCAGGCGCGTCGGTCCCAT
CGGAGTTGTTTCGACCGGCCTCAAGTGGGCCATCCCGTCGGTGCTCGTTT
CCGTCGCGGTCGATTCCGTGATGTGGGCCAGGTGAGACCGCACCCCATGC
AAAGGCGAGACGGAGCTAACACGTTTTGTTTTCGAGACGACCTGCCCCCT
CCCCCCGCCCAGTGTCTACATGTTACATTGTTTGGCACCCGCGTGAGGGG
TAACATGGAACGCGCCCATCTCTGTCTCCGTAAAAATAATTCGTTTCAGT
CGATGCTGCCGCCCATAAATAAAAGCAAGAACTTCCGCTCGCAAGCGGTT
CTTTGTGGGATGCGGCTCAATCCTTCAGGCGACTTCACCCAACGCCTCAC
GTTTCGCTTCGCAAAGGTTTTGGTGCATGCGATGTCTGCCTGGCCGGTGA
GCACCCGACCGTGTTCCGTGCCGGCATTATTATACGACTACAGCCGTGAT
TGGTATCGAGTACACCCCCCCCCCCCCACACCTCCCGCCGCCGCCAAAAT
TTCAAAGCGCGTCAACCACTAACAGCGAGACGACCCCCCCTCTCCCCGTC
CGCTCCCCCCTACTCCCCCTCCCTCCTCAATCCCGGCGCCCCCTACCCCC
CTCTCACCCCTGCGAGAGTGTTACCTACTGAGCTATAGGGGTAAAAGATC
GATCGATTACCAAGCCCAGGGTAATCCCTATAGCACCCCCCATCCCCGTC
CCCTCCCTCCGCCCCCCCCCGCCATCAAGTACCTTGGGCAGATGATCGAG
GGACATGATCTAGAAACTCCAGGGGAGGGGGGGGGGGGCTGTATTCATGA
TGTTTACTATTACGGAGGTCCATAGTTAATAAGACCTATGGTATACATGA
AAAACTATATATTTTCCCATTTTTACTAACAAAATTTGGTCCCATTAACT
ATGGACCCCCGGAATACCTGGGTTGTTTTGCCTGGGTTGGATCTGTAGTT
CGAACAGGTCCTGCACTGCATGTCATGACGACAGCTTAGGATCTGCAGTA
GATCACCAGTAGATCAGGATCTGCCCGAGATGTGTTGAGTGTTTTCTTGA
GGAGCCCGTCAACGTATGTAAACGTTTTTACCTGTATGGTCGAAAATGAG
TATTACCGGTGCTATTGTAGTTTTTGGCCATTCGGGAATTTACGATGCGC
GCTATGCTGGCAGCGGCGCGTAGATAGCTCTTGTAGCTCGCACAGAGGCA
GGGAGGGAAGCATGCAGGCGTGCTTTACAGGGGGGGGGGGGGGGGGCTTC
ATGCGATCCCCTGTGTTTTGTTCCCTATGCGCCGCTCTTATTTAAAATCA
GATGGTATCGACAGGAGCTCTTCTCCCGTAGAGTTCGTTTTTCTTCGAGC
TTGGTCTGGTCACTGGCTGTGCTGTGTTTCTCCGTGCAGTTCCTGTTGAA
TGGTGCCGGTTTGATGTCTGACGTACGGCGCTGTTGTGGGCACTTTCTTC
TTGGGAATCTCTAGGTTCTTGCTCCCAAGTCTCCGTTTTTATCGAACACG
AGCGGTGCGCCCGCTACAGCAGCGCGGCAGCTGGGGCGACGTGTTGCGCC
GTCGCGTCGGCGCTATCGCATGTAACTGCGTACGTACAACTTGTACGCAA
GTTCATGCGGCCTGCACGCAAGTGCCATGCAAATTGGACAAGTCCATACG
TGCGACAAGTTCGCATACAACTTGTGCATACAAATTGCATAGAACCCGCA
GGCAATTGCACATGCAAGCTTTGCAGGCGCTTGCTTCGCAAACATTGATT
ATTTACGGGGGACCTATAGTAAATAGGACCAAGTATTGTTAGTAAAAATA
GGTAAATATATAGGTTTTTATGTGTACCGTAGGTCCTATTAACTATGGAC
CCCCGAAATAGTAATAATAGGTAAGTATATAGTTTTTTATGTACATCGAA
GTATACCATAGGTCCTATTAACGATGGACCCCCGTAATAGTGTACCTGGT
GTATGATTGATTCGAATTTCGGATTTACATCGATTTGATGGTTTTCCATG
TTAGGTGGCTGTGGCCGGAGGGGCAGGTGCTGCTGTTCAACACCGTCGAC
AACCGCAGCTCGGAGTGGGGGGAGATGCCCATCTATTGGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12746:142..7383+

>mRNA_M-pyrifera_M_contig12746.5530.1 ID=mRNA_M-pyrifera_M_contig12746.5530.1|Name=mRNA_M-pyrifera_M_contig12746.5530.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig12746:142..7383+ (Macrocystis pyrifera P11B4 male)
CAGGTCGCCGCCCGCCTTGTTCTTGGCCTCCTGTGCTGGCTGTGCTTTCG
GCGGTTTAACGCGGCGGTGGCGGCGAAGTTCGGGGAAGCTGCGGCGGCCT
GCGTTGCCGCGGTGTGGTCGCTGCAGTTCCATCTGCCTTTCTACCTTAGC
CGGACCCTGCCCAATGCTTTCGCGCTGTGCGTGGTTCTTCTGGCGCTCGG
GCAGGTCGCCGCCCGCCTTGTTCTTGGCCTCCTGTGCTGGCTGTGCTTTC
GGCGGTTTAACGCGGCGGTGGCGGCGAAGTTCGGGGAAGCTGCGGCGGCC
TGCGTTGCCGCGGTGTGGTCGCTGCAGTTCCATCTGCCTTTCTACCTTAG
CCGGACCCTGCCCAATGCTTTCGCGCTGTGCGTGGTTCTTCTGGCGCTCG
GGGCTTGGCTTGGGGACAGAATTCCGAGGACACTGGGGCTGCTCACGCTA
GCCACCGTCGTGTTCCGGTGCGATGTGGTGGTGCTGCTTGCACCCCTTAC
ACTGCAGCTCCTTCTGACCAGGCTTGGCTTGGGGACAGAATTCCGAGGAC
ACTGGGGCTGCTCACGCTAGCCACCGTCGTGTTCCGGTGCGATGTGGTGG
TGCTGCTTGCACCCCTTACACTGCAGCTCCTTCTGACCAGGCGCGTCGGT
CCCATCGGAGTTGTTTCGACCGGCCTCAAGTGGGCCATCCCGTCGGTGCT
CGTTTCCGTCGCGGTCGATTCCGTGATGTGGGCCAGGCGCGTCGGTCCCA
TCGGAGTTGTTTCGACCGGCCTCAAGTGGGCCATCCCGTCGGTGCTCGTT
TCCGTCGCGGTCGATTCCGTGATGTGGGCCAGGTGGCTGTGGCCGGAGGG
GCAGGTGCTGCTGTTCAACACCGTCGACAACCGCAGCTCGGAGTGGGGGG
AGATGCCCATCTATTGGTGAGTGGCTGTGGCCGGAGGGGCAGGTGCTGCT
GTTCAACACCGTCGACAACCGCAGCTCGGAGTGGGGGGAGATGCCCATCT
ATTGGTGA
back to top