prot_M-pyrifera_M_contig100.5.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100.5.1
Unique Nameprot_M-pyrifera_M_contig100.5.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length290
Homology
BLAST of mRNA_M-pyrifera_M_contig100.5.1 vs. uniprot
Match: D7FR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR75_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.320e-43
Identity = 101/296 (34.12%), Postives = 146/296 (49.32%), Query Frame = 0
Query:    1 LLVSVSVIGESGAGRLPDFPWSDNELKVHAGYYTDGGKYLGGIPGYNNMY-EMFDCTEYLYDFSYGNTGGIAKVCKAWVANEVSSTAYDVARCSCE--SFQDKEYCDMWTCSQIAVYTPVSCSASDAYSGKXXXXWVCLDTDSINDDXXXXXXXTEEHTCVTTSPTADFCVAWTGVIDTADSLGLSTCSCVQGSTANSVCSHWECQMRGMDKCSSAGSGWCDIGYAVGVGGLFGSLGAVFTA--VGLFRFLKNEPPLCRWSWL-DYFLGFAWMAVWSIGVVIWGGEDGATYVTLWW 290
            +L S ++  +     LPDFP +  +++V AGYY+  GKYLGG+P  + +  E++DCT++ Y     NT   A  C  W A+E     + +  C C+                + + YT   C  + A  G XXXX  C    S            E++ C   SP+  +C AW G +  +D   + +C C+     + VCS WEC+  G+  CSSAG+ WCD+G ++GVGG  G LG +     +GL   + +E      + L    LG  W   WS GVVIWGGE GATYV + W
Sbjct:   40 VLFSTAIFTDVARAELPDFPMTLADMEVLAGYYSADGKYLGGMPKAHTLSREIYDCTDFQYS-EPNNTASNATYCTGWSADESYGGGFQLGDCECKFSXXXXXXXXXXXXXQENSDYTLCQCDDTGAAEGLXXXXXSCKQICS------GGRAEFEDYRCQRPSPSGHYCEAWNGNVTASDEFEIVSCECLANWHGDQVCSFWECEELGLSTCSSAGASWCDLGVSIGVGGGIGLLGVLVICYGIGLVGRIDSEGQSDTTAGLMGIALGTVWCLSWSSGVVIWGGEAGATYVGIMW 328          
BLAST of mRNA_M-pyrifera_M_contig100.5.1 vs. uniprot
Match: D7G428_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G428_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 2.270e-40
Identity = 102/320 (31.87%), Postives = 146/320 (45.62%), Query Frame = 0
Query:    2 LVSVSVIGESGAGRLPDFPWSDNELKVHAGYYTDGGKYLGGIPGYNNMY-EMFDCTEYLYDFSYGN------TGGI--AKVCKAWVANEVSSTAYDVARCSCESFQDKEYCDMWTCSQIAVYTPVSCSAS-----------------DAYSGKXXXXWVCLDTDSINDDXXXXXXXTEEHTCVTTSPTADFCVAWTGVIDTADSLGLSTCSCVQGSTANSVCSHWECQMRGMDKCSSAGSGWCDIGYAVGVGGLFGSLGAV-----FTAVGLFRFLKNEPPLCRWSWLDYFLGFAWMAVWSIGVVIWGGEDGATYVTLWW 290
            LV  S +G  G G  PD+P +  ++KV AGYYT+ GKYLGGIP  + +  E+++C    Y +  GN      T G   A  C  W A+E +   +    C C S  ++ YC  WTC+Q+      + S S                 D  SG     W C   DS   +        EE+ C              G +  +D + + TC CV   + + +CS+WEC+  G+  C+S   GWCD+G ++G+ G+FG  GA+     F + G F            + +    G  W  VWS+GVVIWGG DG  YV + W
Sbjct:   40 LVLSSSLGIVG-GVYPDYPMTFADMKVLAGYYTEDGKYLGGIPKADPVSKEIYECAADTYFYPSGNDTVTDSTDGKDEATACMEWRADESAGGVFQKGTCECTSIDNENYCSAWTCNQVKEEEDCNSSGSNCVVSTNTDAVLCQCDLDVPSGLYCDSWSCKQIDSDGREEF------EEYHCQREXXXXXXXXXXNGNVTASDEVEVVTCECVATWSGDRLCSYWECEEIGLSSCNST-RGWCDLGLSIGLAGVFGLAGALAAGFSFASFGCFERSTTGMRAVVCTGVG---GILWCMVWSVGVVIWGGLDGVVYVGIMW 348          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR75_ECTSI2.320e-4334.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G428_ECTSI2.270e-4031.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 280..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..256
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100contigM-pyrifera_M_contig100:202..1128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100.5.1mRNA_M-pyrifera_M_contig100.5.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100 202..1128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100.5.1 ID=prot_M-pyrifera_M_contig100.5.1|Name=mRNA_M-pyrifera_M_contig100.5.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=290bp
LLVSVSVIGESGAGRLPDFPWSDNELKVHAGYYTDGGKYLGGIPGYNNMY
EMFDCTEYLYDFSYGNTGGIAKVCKAWVANEVSSTAYDVARCSCESFQDK
EYCDMWTCSQIAVYTPVSCSASDAYSGKFCSSWVCLDTDSINDDDGGGVV
VTEEHTCVTTSPTADFCVAWTGVIDTADSLGLSTCSCVQGSTANSVCSHW
ECQMRGMDKCSSAGSGWCDIGYAVGVGGLFGSLGAVFTAVGLFRFLKNEP
PLCRWSWLDYFLGFAWMAVWSIGVVIWGGEDGATYVTLWW
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