mRNA_M-pyrifera_M_contig12724.5483.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12724.5483.1
Unique NamemRNA_M-pyrifera_M_contig12724.5483.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A6H5L0Q6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q6_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 8.460e-139
Identity = 205/276 (74.28%), Postives = 232/276 (84.06%), Query Frame = 1
Query:   16 ASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKE-MEIASLALTGLPRPHPFAMERGAEALEVRRGFAQGTCIYGHPLVQQMPASVWL 840
            A V  SP SLS WLKEGPFVL+MSPGFFGFYAHIGAL+AL+  GLL +VSFA GASAGGLVAGLFA+G+SP  MG TVVKFRR+DFWDPVGFGGLLRGKKFE IV+ TLP GV+RFDQ R+PLAVSAFDVSRLTTR ++EG IA ALRATCTFPGLF+PVWH++GVLVDGG+RDTTGMWCVPEE+++CRR+LNVTFG R+GRGVCVPPS FPT SNPRP  + MEI SL LTGLPRPHPFAMERG +A+E  R   Q     G PL++    S W+
Sbjct:  175 AGVLESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGDTVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFSPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLTGLPRPHPFAMERGVDAMEAARN--QVAAAIGEPLLKGHGRSHWI 448          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: D8LEM2_ECTSI (Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM2_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 2.150e-136
Identity = 202/281 (71.89%), Postives = 230/281 (81.85%), Query Frame = 1
Query:    1 AVGFSASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKE-MEIASLALTGLPRPHPFAMERGAEALEVRRGFAQGTCIYGHPLVQQMPASVWL 840
            A G  A V  SP SLS WLKEGPFVL+MSPGFFGFYAHIGAL+AL+  GLL +VSFA GASAGGLVAGLFA+G+SP  MG+TVVKFRR+DFWDPVGFGGLLRGKKFE IV+ TLP+ V+RFDQ R+PLAVSAFDVSRL TR ++EG IA ALRATCTFPGLFAPVWH++GVLVDGG+RDTTGMWCVPEE+++CRR+LNVTFG R+GRGVCVPPS FPT SNPRP  + MEI SL L GL   HPFAMERG +A+E  R   Q     G PL++    S W+
Sbjct:   22 ATGDGAGVVESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPDDVRRFDQGRIPLAVSAFDVSRLMTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLAGLXXXHPFAMERGVDAMEAARD--QVAAAIGEPLLKGHGRSHWI 300          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA)

HSP 1 Score: 295 bits (755), Expect = 4.940e-88
Identity = 143/248 (57.66%), Postives = 182/248 (73.39%), Query Frame = 1
Query:   34 PPSLSEWL-KEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVK---EMEIASLALTGLPRPHPFAMERGAEALE 762
            PPSL++WL ++  + L ++PGFFGFYAHIG L AL+ AGLLE KVSF  GASAG LV GL+A+G++P  M + VV ++R DFWDP G G +LRG+ FEG++ ++LPEGV  FDQCR+PL V+ + +SR TTRV+ EG IA ALRA+CTFP LF PVWH QGVL+DGG+ DT GMW +P   ++ R +LN+TFG        VPPS FP  S+PRP       EI S A+TG+PRPHPFAM +GA A+E
Sbjct:   25 PPSLAQWLAQQSKYALGLAPGFFGFYAHIGVLKALDEAGLLEGKVSFVSGASAGALVGGLYAAGLTPSEMAQRVVAYQRGDFWDPPGVGAMLRGRAFEGLIRSSLPEGVTTFDQCRLPLGVTGYSLSRFTTRVIQEGDIALALRASCTFPVLFQPVWHPQGVLMDGGVFDTAGMWSIPSNGDDYRCILNITFGTGPVVDQVVPPSLFPCRSHPRPPSAGGRKEIVSFAITGVPRPHPFAMHKGAAAIE 272          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A2D5EXV4_9DELT (Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5EXV4_9DELT)

HSP 1 Score: 186 bits (473), Expect = 9.720e-55
Identity = 107/250 (42.80%), Postives = 143/250 (57.20%), Query Frame = 1
Query:   37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRD-----GRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
            P+L EWL+E PF L +S GFFGF+AH G +  LE A LL   +   G+SAG LVAG +A+G+    + +T ++  R DFWDP    GLLRG+ F G++E TLP G  RF++CR P+AVS FDV    TRV++ G IAPA+ A+C FPG+F PVW ++   +DGGI D  G   +P E     RVL    G R      G      P+R              + ++ + GLPR  PF +E+G  A E  R
Sbjct:    4 PTLREWLREEPFTLGLSSGFFGFFAHAGFVEVLEEASLLP--ARLAGSSAGALVAGCWAAGLDAPAIARTFLELERRDFWDPAPGAGLLRGRLFRGLLEETLPRG--RFEECRRPVAVSVFDVLGRRTRVLDRGPIAPAVHASCAFPGMFQPVWIDRRPYLDGGIADRPGALALPPEG----RVLYHHLGSRSPWRRRGSAALAIPAR------------PNLRAVVVEGLPRVSPFRLEQGRVAYEHAR 233          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A6N7Q127_9DELT (Patatin n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q127_9DELT)

HSP 1 Score: 177 bits (449), Expect = 5.210e-51
Identity = 110/252 (43.65%), Postives = 147/252 (58.33%), Query Frame = 1
Query:   16 ASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDG-RGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEV 765
            ASVR + P+L EWL EGPF + +S GFFGF+AH G +  LE  GL   +VS   G+SAG LV G++A+G S   +   +++ +R DFWD     GLL GK F   +E  LP  V+ FD+CRVPLAVS +DV    TRV+ EG +APA++A+CT PGLF PVWHE   L+DGGI D  G+  +P  +    R+L      R   R V  P  + P            +A+L +  LPR  PF +  GA A ++
Sbjct:   10 ASVRPT-PTLREWLHEGPFSMGLSSGFFGFFAHAGVMTVLEDEGLSPARVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRPGPGLLAGKLFRARLEALLP--VRTFDRCRVPLAVSVYDVFSRKTRVLAEGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPPGE----RLLYHHLASRSPWRKVNSPSLKVPERGG--------MAALVIESLPRVGPFRLPEGARAFDI 243          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A4U1H7W2_9DELT (Patatin n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1H7W2_9DELT)

HSP 1 Score: 176 bits (447), Expect = 1.160e-50
Identity = 104/252 (41.27%), Postives = 139/252 (55.16%), Query Frame = 1
Query:   34 PPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVT--FGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRRGFAQ 783
            PP+L EWL+EGPF + MS GFFGF+AH G +  LE  GL    +   G+SAG LV GL+A+G+    +   +++ RR DFWDP    GLL G  F   ++  LP  V+ FDQCR PLAVS +DV    TRV+  G +APA++A+CT PGLF PVW E   L+DGGI D  G+  +PE        L     +  R    + VP             +   + +L +  LPR  PF +  GA A E+ R  A+
Sbjct:   15 PPTLREWLREGPFAIGMSSGFFGFFAHAGVMTVLEDEGLAP--ARVAGSSAGALVGGLWAAGLDAAAIRDELLRLRREDFWDPRPGLGLLAGALFRARLQALLP--VRSFDQCRAPLAVSVYDVRARGTRVLECGPLAPAIQASCTVPGLFHPVWLEGRPLLDGGILDRPGLAGMPEGTRLFYHHLAARSPWRRRQSPALAVP-------------ERQGMTALVIASLPRVGPFRLPEGARAFEIARRAAR 249          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A4U1J9U9_9DELT (Patatin n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1J9U9_9DELT)

HSP 1 Score: 172 bits (437), Expect = 3.770e-49
Identity = 102/244 (41.80%), Postives = 139/244 (56.97%), Query Frame = 1
Query:   37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEV 765
            P+L EWL+EGPF + +S GFFGF+AH G +  LE  GL   +VS   G+SAG LV G++A+G S   +   +++ +R DFWD     GLL GK F   +E  LP  V  FD+CRVPLAVS +DV    TRV+  G +APA++A+CT PGLF PVWHE   L+DGGI D  G+  +P ++   R   +        R    P  + PT           + +L +  LPR  PF +  GA A ++
Sbjct:   16 PTLREWLREGPFSMGLSSGFFGFFAHAGVMTVLEDEGLAPTRVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRLGPGLLAGKLFRARLEALLP--VPTFDRCRVPLAVSVYDVFARGTRVLAGGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPADE---RLFYHHLASRSPWRKADSPSLKVPTRDG--------MTALVIEALPRVGPFRLPEGARAFDI 243          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A0K1PGW7_9DELT (PNPLA domain-containing protein n=2 Tax=Vulgatibacter incomptus TaxID=1391653 RepID=A0A0K1PGW7_9DELT)

HSP 1 Score: 170 bits (430), Expect = 2.910e-48
Identity = 108/246 (43.90%), Postives = 134/246 (54.47%), Query Frame = 1
Query:   40 SLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFG-GLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
            +L+EWL E PF LAMS GFF FYAH G L ALE AGL   +VS   G+SAG LV G +A+G+   V+   + +  R DFWDP GFG GLLRG+ F   +E  LP   + FD+CRVP AVS FDV    TRV+  GR+ PA+ A+C  P LF PV  E     DGGI D  G+  +P       RVL+               SR P   +  P     + S  + GLPR  PF +E G  A  + R
Sbjct:   10 TLAEWLAEEPFALAMSSGFFSFYAHTGFLAALEDAGLTPARVS---GSSAGALVGGAWAAGVDAPVLAAELERLERRDFWDP-GFGPGLLRGRLFRERIEGLLP--AETFDRCRVPAAVSVFDVRSRKTRVIEMGRLGPAICASCAVPFLFQPVRIEGRSYFDGGILDRPGLAGMPPSTP---RVLHHHIA-----------SRSPWRMSAEPPSRQGMLSFVIDGLPRSGPFRLEEGRRAFSLAR 235          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A7W0VK99_9DELT (Patatin-like phospholipase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0VK99_9DELT)

HSP 1 Score: 169 bits (427), Expect = 5.460e-48
Identity = 94/245 (38.37%), Postives = 134/245 (54.69%), Query Frame = 1
Query:   37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
            P+L EWL  GPF +AMS GFF FYAH G   AL A GL  +     G+SAG +VAG + +G+ PE  G+ + + RR DFWDP    G+L G KF+ ++   LP  + R + CR+P+ +S FD+    TRV+  G +A A+RA+C  PG+F PVW ++    DGGI D  G+  +P  +     +    F                    P P K  ++ +L L GLPR +PF ++ G  AL++ R
Sbjct:    2 PTLGEWLANGPFGVAMSSGFFAFYAHTGMAAALLARGL--RPIHVAGSSAGAMVAGAYGAGIDPESHGRVLSQLRREDFWDPRLGWGVLSGNKFDALLREMLP--IARIEDCRIPVRISVFDILARRTRVLETGDLATAIRASCAVPGMFHPVWIDRRPYWDGGILDRPGIAGLPPGRLLYHHITGPVF--------------------PIP-KRPDMVTLVLDGLPRANPFRLDAGRRALDLAR 221          
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A7S3M828_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M828_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.720e-46
Identity = 103/278 (37.05%), Postives = 151/278 (54.32%), Query Frame = 1
Query:   70 FVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVP---------------EEQENC------RRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMER-GAEALEVRRGFAQGTCIYGHPLVQQMPASVW 837
            + LA++PGFFGFY HIG L ALE    L   S   G+SAG LV G  ++GM+PE M K V++ +RAD WD  G GGLL+G+ FE ++E  LP  VQR ++C+ PLAV+ +D+ R  T  + EG++A A+RA+CTFPG+F PV  E    +DGG+ D  G+  +P               E QE+       + V+N+ FG        +PP           +K  ++ ++ +  +P  HPF+M+  G EA +  R          H  +Q+  A+ W
Sbjct:   53 YALALTPGFFGFYGHIGVLKALEETNCLRP-SHVSGSSAGALVGGFLSAGMTPEEMIKAVLEIKRADIWDVGGVGGLLKGELFEQLIERNLP--VQRIEECKYPLAVTTYDLMRFKTLHLTEGKLAQAMRASCTFPGMFQPVMIEGSPNIDGGVFDNVGLMALPHALGLHKSQSVNDCTECQESASDKTRMQLVVNIVFGRSSVASSVLPPQ----------LKNHKLLTVVVENIPSVHPFSMDTMGVEAYKAARAATLKALHSSH--MQEFSANHW 315          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0Q6_9PHAE8.460e-13974.28PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LEM2_ECTSI2.150e-13671.89Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835YR40_9STRA4.940e-8857.66Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=3... [more]
A0A2D5EXV4_9DELT9.720e-5542.80Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5... [more]
A0A6N7Q127_9DELT5.210e-5143.65Patatin n=1 Tax=Polyangium spumosum TaxID=889282 R... [more]
A0A4U1H7W2_9DELT1.160e-5041.27Patatin n=1 Tax=Polyangium aurulentum TaxID=256789... [more]
A0A4U1J9U9_9DELT3.770e-4941.80Patatin n=1 Tax=Polyangium fumosum TaxID=889272 Re... [more]
A0A0K1PGW7_9DELT2.910e-4843.90PNPLA domain-containing protein n=2 Tax=Vulgatibac... [more]
A0A7W0VK99_9DELT5.460e-4838.37Patatin-like phospholipase family protein n=1 Tax=... [more]
A0A7S3M828_9STRA1.720e-4637.05Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12724contigM-pyrifera_M_contig12724:3959..8672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.8
Seed ortholog evalue1e-111
Seed eggNOG ortholog2880.D8LEM2
Hectar predicted targeting categoryother localisation
EggNOG OGs2D447@1,2STTJ@2759
Ec32 ortholog descriptionAcyl transferase/acyl hydrolase/lysophospholipase
Ec32 orthologEc-23_002490.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size840
Cds size840
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12724.5483.1prot_M-pyrifera_M_contig12724.5483.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12724 3959..8672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.1977973-CDS-M-pyrifera_M_contig12724:3958..40211622815786.1977973-CDS-M-pyrifera_M_contig12724:3958..4021Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 3959..4021 +
1692277568.7436614-CDS-M-pyrifera_M_contig12724:3958..40211692277568.7436614-CDS-M-pyrifera_M_contig12724:3958..4021Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 3959..4021 +
1622815786.2120214-CDS-M-pyrifera_M_contig12724:4609..47051622815786.2120214-CDS-M-pyrifera_M_contig12724:4609..4705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 4610..4705 +
1692277568.7669961-CDS-M-pyrifera_M_contig12724:4609..47051692277568.7669961-CDS-M-pyrifera_M_contig12724:4609..4705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 4610..4705 +
1622815786.22177-CDS-M-pyrifera_M_contig12724:5615..57771622815786.22177-CDS-M-pyrifera_M_contig12724:5615..5777Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 5616..5777 +
1692277568.7765858-CDS-M-pyrifera_M_contig12724:5615..57771692277568.7765858-CDS-M-pyrifera_M_contig12724:5615..5777Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 5616..5777 +
1622815786.2317717-CDS-M-pyrifera_M_contig12724:6509..67321622815786.2317717-CDS-M-pyrifera_M_contig12724:6509..6732Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 6510..6732 +
1692277568.786515-CDS-M-pyrifera_M_contig12724:6509..67321692277568.786515-CDS-M-pyrifera_M_contig12724:6509..6732Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 6510..6732 +
1622815786.242547-CDS-M-pyrifera_M_contig12724:7557..76571622815786.242547-CDS-M-pyrifera_M_contig12724:7557..7657Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 7558..7657 +
1692277568.7984142-CDS-M-pyrifera_M_contig12724:7557..76571692277568.7984142-CDS-M-pyrifera_M_contig12724:7557..7657Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 7558..7657 +
1622815786.2536929-CDS-M-pyrifera_M_contig12724:8476..86721622815786.2536929-CDS-M-pyrifera_M_contig12724:8476..8672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 8477..8672 +
1692277568.8067908-CDS-M-pyrifera_M_contig12724:8476..86721692277568.8067908-CDS-M-pyrifera_M_contig12724:8476..8672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12724 8477..8672 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12724.5483.1

>prot_M-pyrifera_M_contig12724.5483.1 ID=prot_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
AVGFSASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGL
LEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGL
LRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAP
ALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVT
FGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGA
EALEVRRGFAQGTCIYGHPLVQQMPASVWL
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mRNA from alignment at M-pyrifera_M_contig12724:3959..8672+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12724.5483.1 ID=mRNA_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4714bp|location=Sequence derived from alignment at M-pyrifera_M_contig12724:3959..8672+ (Macrocystis pyrifera P11B4 male)
GCGGTGGGCTTCTCTGCGAGTGTTCGATCTTCTCCGCCCTCTTTGTCGGA GTGGCTGAAGGAGGTGGGGGCCAACCGTAGTTCGCCTGATGGCGGCGTGC AGTACCGGAAAATAAAGGCGATTGCAAGGCGGGCTGGCCAGGTCGGGCCT GTATAGGTCCAACCGGTTCTCGATCGGAGGGTGATTGAGTTGGTTGTTGG GTTGGCTTTGGCGAACGTTCCATACTTGAAGGACCTGAGCCTGCCCCCCC CCCCCTGCCTGCCGCTATTTTCGTGTTGGAATGTTTCGTCAAGAGGTTGA TAATTGTGTTGCCGCCTCGTCTCAACAATGTGCGGAATGAATCGCGACAA ATTCGGCGACACATAGAAGAGAGGGGGTTAATCACCCCTGCCTCCTCCTC CTCCTCGCTTTCTCACTCGCGGCTTACCGTGGAAGCGCCCGAGGCCTTCT GCTGACACCGTACCGCTTGGTTGGTGGCTTCCGACAGCGTGTCGCATTCT CGGCCTCCCTGCTCTTTAGATGTCGACGAGTAGTACTGACATTGATATCC TACGTCCTGGTCTCTTCGCAACCTCGGCGAAAAGCAGGGGCCGTCTCTCA ATAACCCCTTCCCCCCCCATCCGCGCTTGGTGTCGCCGTGGCTGTGGTCA GGGGCCGTTCGTTCTGGCCATGTCTCCTGGTTTCTTCGGCTTCTACGCGC ACATCGGAGCTCTCGTTGCCCTCGAAGCCGCAGGTCTTCTCGAAAAGGTG GGTGGGTTGACACATTTGTACCGTGTGCCAGCTACTGAACACATCGGTCT ATGTTTGCGTTGTTTTTGTTTTTAGCAGAAGAATCCGTCTCAGTACTCCA GGGATTTCGGCTTTCTGCACGCTGGTGTGCTTGTGAGCATCGTTTGGGAA GCATAAGTGTCTCTCGGTTCGGACGCGAGGCTTGATAGGTAGACTCCTCC GGTTTTCGCACGGAGTGCCGCCAGTGCTCACATGATTGTATTTCTTCGAC GAGCGCCCCCTCTCCGACTCCCGCTCCTCTTCTGGGATGTTTCCTCCTTG AAGAAAAAAGGGGGCTTCTCAGCTGGGGGCGTGTTGCACCCCGCTCTATA TGAACTCCACGCCCTTGTACTCATGCGTCCGCTTGTTTCACCCGCCGCTC TCGAAGCCCGCGCTCCCAACCGATGCACTCACTTGCCACGCCGACGACGT TTTGTGGGGACCCACGCCCCGTGCAAGGTTCCAAGGCCCAGCCGCGCAGC AGGTGCTGCATAAAGCCTTCTCGCACACAGGGACGCCTTTCACCGAGCAC GCCACGATACGTCCCTGCTCTCCAGGCTCTGGTGACGGTCTAGACTGTGA TGGCCAAAGCGGTGGCTAGATAAACACGCTCATCGTCCGCCTTTCTGTAT ATACATCAACGAGTTGTTAAACCCACTACGCCGACCCCCGCCCTCCCGCC CCCTCGAAATGACTATATATTTGTACAACGATGATGATATGGTGATGATG GTGTTCTCACGTTGGCTCACTTCCCTGAATTCTAAACAGACGAACAAAAG CGTCCCGATGGGAGAACAAATAAGCACAAAGCACGTTCTTAACTCCACCT CTTGGGATCCCGGATCGCGGCTGGTCGTTTCGAAATCGCGCGCATGTCGC GTGCCAGGTGAGCTTCGCCGTGGGCGCAAGCGCGGGTGGCCTGGTGGCGG GGCTCTTTGCGTCCGGCATGTCGCCGGAGGTCATGGGCAAGACCGTCGTG AAGTTCCGTCGGGCGGACTTTTGGGACCCCGTCGGGTTTGGGGGTCTCCT CCGAGGGAAGAAGTTCGAGGTGAGAAGTAGGCGTTGCTGATTCTGCGCTG TTGTACCCTGTGAGTGTCTGGTTTTCGGTTACCTCGCCGGGTGTTTAGCT TTGCGACTCACGGAATGATACTGGTTGTACGGCAGGAAGTTTTAACGGCA AGAACACAACGGGCGCGCGAAGGCAGGGGGGGGGAAACGACCCCTGACCG GAATAACATATATAGACGGAGCGGGCAAGCGTTTGCAGGCGGGAAGGTGT GCTTTTGCCTGTGGTGAGCAGGCGCAAACGGCCAGCGAAACCAAAGGGGT AGAGGGGCCATGGTAAAGGTGATTCCGGGTTCAACCTCGATGTCTCTGTA AGTCTGCATACCTTACGTGTTCGTGCTCGGGTCTCACGGAAGGACTCCTG TTCTTCGTCATTGCTCGGCCTGACGACGTGGACGGGTTGTAGAAGCCATC GGCAGCAACGTTGAACGATGTTCGCAATTCCCATGACACTACCCGGTCGC TTCATACCAGACATCCATTGCACAGAAAAGCGCGTCGTGACCCAAGACGC CGAGGACAGCAAAAATCTGGAATCGCATGCGCTGCACGCCGTCCGTGTCG GACGCCCGACCCTTCCAGCCCCATCGAAATTTCTCTGCAAACGATTCGGT AACTCCCGCCCTCCGACCCCCGCCGCCCGCTCGGCTCTGAACCGATTGTA TGTGGGAAACAACCAACACCAATGCGTCAACGCCGGACGGATGTTGTTCA GGGCATCGTGGAAAACACTCTGCCCGAGGGCGTGCAGCGCTTCGACCAGT GTCGAGTGCCCCTGGCCGTGTCGGCCTTCGACGTTTCCCGCTTGACGACC AGGGTGGTGAACGAGGGGAGAATCGCCCCCGCGCTTCGAGCAACCTGTAC ATTTCCGGGCCTCTTCGCTCCCGTCTGGCACGAGCAAGGCGTCTTGGTGG ACGGCGGTATTCGCGACACGACCGGTGCGAGGCTCACCATTGCCCAGCGC GCGGGGGGGCTCGTGTTGTATCCGCAGGGTTTAGGCGTCGTTGTTCAACG TGTTCGTTTCCATGCGTCTTCTAAGATTTTCCTGCGTGCTTGTGATTTTC AGGCCACCTTAGGGTTACGCCTCTCGCAGATGACGAGGTTCTCACTAGAT CGGGGTGGCGTCTTGGTGCTCCAGACCAGCGCGAGAACAATTCCGTTCAA AGCTAGAGAGCAAGAACGTTGTAGGGCGTTTTGTGGGGTTAGCACACGGC TGAATACCTGCCACTTACATCGGGGGCTGGTCTTGAAAAATTGTAATTCG TAGAATTTTTCTCCAGTCCTTGCTCTTACTGCCACCGGTTTAGCCCTTTT TGAGCAACGCTGGCGATGGAAAAGTTACCATAGACAAACAGTCAAGGGCG TTATCTCTTGCCTGATGGCGCAAGCTCGTGGATGGTTACACTATAAACTC TGTGCTAGTGATAGTTATGGGTAGTTTATTTTGTTACTCCAGAGGATGGG CAGGCCGTTGCTCCAGACCCGTTGAAATACGCGTGATACAGTTGTAGTGT CCTTCGTTTTACGATGCGATGCGTTTTACGCTGCCATCGATACCCTCCTC TAGGGTGTGTCTAGCACCAAATTCTTCGTGCGAGCGTGCGAAGTGCCTGC GACGAGGGCACGCCGTCACTCTGCAAGCGCTCGGGCTGAGTAATTACCGT CATATTGGACGATGCGCGGTGCCCCCTTCCCCTCTTGTTACGCTGCTGAA CTGCTTGACTGCGCCTAACCCACACCCCGTGTGCCTCTTTTTCGCGCAGG AATGTGGTGTGTGCCCGAAGAACAGGAGAACTGCCGCCGCGTCCTGAATG TTACCTTCGGGTGCAGAGACGGCCGGGGAGTATGCGTACCGCCTTCCAGG TGCTTGGAAAAAGTGCATGATTTTTGTTTTTCGTATTCCGCGGATGCGAC TCCATTCTCGGGAGCTGGTTTTTGCCGCAGTACAACGAAGTATCCCTTTG CAAGTAATAGAATCACGCGTGCTAACAGTTTCCCCGAGCAATGGTCCTTT TTGGCCCTATTTAGGGCCTCCCTTGCAGGCGTCACGAATACCTCGTGCGC ACTTATTTCTGTTGTAGAGTATACGGTGTTGCAAAGGGGGGGAGGGGTGT ACTCATACCGTGCATGACCGTAGTGGCATGACCATAGACCCTTGCATCCC TGCAATGCCGGGACGGAGCACATCGGATTTTCGCCGACCAGGCAGACATA GCTTGCAAGGAGGGAGGGGGGGTGTGTGTACGCTTTGTCATGCATGGCCG TAGTCGTATGACCTTAAACACTCTCATCCCTACAATGCAAAGGGGGGGGG GTGTACTCGATAGGAAAGACGTACTCGATCTCATGCATGGCCGTAGTCGT ATGACCAAAGGGGGGGGGAGGGGTAAGATGTTCGCGTTGATCCTTCGCCT CGTGCTTGGCGTAAATGTCACCTTCGGTGAACATTTCGATTTTTCCACAA AGACAAATGCACCCCACGAGCCTGAAGCCGCATTGTGCACAGTGCGACAG AGAATCTCTGGCGTGGGTCACACCGCGGAACGCTGTCTGGTGCGGGTGGT ACCATTGGACGGGTTCGAAGCAGTTGAACTTGTGTTTTACGTGGTTGCTG CCGCCTGCAACGCCCGCTCTTCCTGACACGCAGCACAATCGGGGACGTGT GTTTGCGCTCGTCGTCAGGTTCCCCACGGAATCTAACCCGCGACCTGTTA AGGAGATGGAGATTGCATCACTCGCGTTAACGGGACTCCCGAGGCCTCAT CCGTTTGCGATGGAGCGAGGAGCGGAGGCCTTGGAGGTGCGAAGGGGTTT CGCCCAGGGCACTTGTATCTATGGGCACCCCTTGGTGCAGCAAATGCCAG CCTCTGTCTGGCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12724:3959..8672+

>mRNA_M-pyrifera_M_contig12724.5483.1 ID=mRNA_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig12724:3959..8672+ (Macrocystis pyrifera P11B4 male)
GCGGTGGGCTTCTCTGCGAGTGTTCGATCTTCTCCGCCCTCTTTGTCGGA
GTGGCTGAAGGAGGCGGTGGGCTTCTCTGCGAGTGTTCGATCTTCTCCGC
CCTCTTTGTCGGAGTGGCTGAAGGAGGGGCCGTTCGTTCTGGCCATGTCT
CCTGGTTTCTTCGGCTTCTACGCGCACATCGGAGCTCTCGTTGCCCTCGA
AGCCGCAGGTCTTCTCGAAAAGGGGCCGTTCGTTCTGGCCATGTCTCCTG
GTTTCTTCGGCTTCTACGCGCACATCGGAGCTCTCGTTGCCCTCGAAGCC
GCAGGTCTTCTCGAAAAGGTGAGCTTCGCCGTGGGCGCAAGCGCGGGTGG
CCTGGTGGCGGGGCTCTTTGCGTCCGGCATGTCGCCGGAGGTCATGGGCA
AGACCGTCGTGAAGTTCCGTCGGGCGGACTTTTGGGACCCCGTCGGGTTT
GGGGGTCTCCTCCGAGGGAAGAAGTTCGAGGTGAGCTTCGCCGTGGGCGC
AAGCGCGGGTGGCCTGGTGGCGGGGCTCTTTGCGTCCGGCATGTCGCCGG
AGGTCATGGGCAAGACCGTCGTGAAGTTCCGTCGGGCGGACTTTTGGGAC
CCCGTCGGGTTTGGGGGTCTCCTCCGAGGGAAGAAGTTCGAGGGCATCGT
GGAAAACACTCTGCCCGAGGGCGTGCAGCGCTTCGACCAGTGTCGAGTGC
CCCTGGCCGTGTCGGCCTTCGACGTTTCCCGCTTGACGACCAGGGTGGTG
AACGAGGGGAGAATCGCCCCCGCGCTTCGAGCAACCTGTACATTTCCGGG
CCTCTTCGCTCCCGTCTGGCACGAGCAAGGCGTCTTGGTGGACGGCGGTA
TTCGCGACACGACCGGGCATCGTGGAAAACACTCTGCCCGAGGGCGTGCA
GCGCTTCGACCAGTGTCGAGTGCCCCTGGCCGTGTCGGCCTTCGACGTTT
CCCGCTTGACGACCAGGGTGGTGAACGAGGGGAGAATCGCCCCCGCGCTT
CGAGCAACCTGTACATTTCCGGGCCTCTTCGCTCCCGTCTGGCACGAGCA
AGGCGTCTTGGTGGACGGCGGTATTCGCGACACGACCGGAATGTGGTGTG
TGCCCGAAGAACAGGAGAACTGCCGCCGCGTCCTGAATGTTACCTTCGGG
TGCAGAGACGGCCGGGGAGTATGCGTACCGCCTTCCAGGAATGTGGTGTG
TGCCCGAAGAACAGGAGAACTGCCGCCGCGTCCTGAATGTTACCTTCGGG
TGCAGAGACGGCCGGGGAGTATGCGTACCGCCTTCCAGGTTCCCCACGGA
ATCTAACCCGCGACCTGTTAAGGAGATGGAGATTGCATCACTCGCGTTAA
CGGGACTCCCGAGGCCTCATCCGTTTGCGATGGAGCGAGGAGCGGAGGCC
TTGGAGGTGCGAAGGGGTTTCGCCCAGGGCACTTGTATCTATGGGCACCC
CTTGGTGCAGCAAATGCCAGCCTCTGTCTGGCTCGTTCCCCACGGAATCT
AACCCGCGACCTGTTAAGGAGATGGAGATTGCATCACTCGCGTTAACGGG
ACTCCCGAGGCCTCATCCGTTTGCGATGGAGCGAGGAGCGGAGGCCTTGG
AGGTGCGAAGGGGTTTCGCCCAGGGCACTTGTATCTATGGGCACCCCTTG
GTGCAGCAAATGCCAGCCTCTGTCTGGCTC
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