prot_M-pyrifera_M_contig1272.5482.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1272.5482.1
Unique Nameprot_M-pyrifera_M_contig1272.5482.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length229
Homology
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BLAST of mRNA_M-pyrifera_M_contig1272.5482.1 vs. uniprot
Match: D8LJD9_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJD9_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 8.810e-83
Identity = 132/221 (59.73%), Postives = 170/221 (76.92%), Query Frame = 0 
Query:    1 MPVHVFHGKADHMVPIAAVEWMAEEMPACTLSVKMGGTHALLMDAGVLDCVLEFICEDFKHFEEHAADR-------ADGEAADERGP--ALSFPKHTFDHARHFKATGYLCCREGMLMKAWKDRYFVLEGFGMYEYDGPSSSTARRVVDLRGTVAHVLMDSAEA----HASDPVNRLFPFKLVDAKHRVLYYLGANTTEDRALWVEILTKASRFSMGSGEE 208
            MPVHVFHG+ADHMVP  A +WMAEEMPACT+SVKMGGTHAL+MD+GV+DCVLE +CEDFKHFEEHAA R       ++ +++  + P  A SFP HT    +HF+A G L CREG+L+K+W++RYFVL+G+ ++++DGP S+TARRVVDLRG+VA +    AEA     ++   +RLFPFKL DA HR+L+ L A +T DR+ WVE LTKASRFS GSG++
Sbjct:  287 MPVHVFHGRADHMVPFPAAQWMAEEMPACTVSVKMGGTHALIMDSGVVDCVLECMCEDFKHFEEHAASRRLKKRPPSESKSSAGKVPEAAFSFPAHT----QHFQAKGVLRCREGVLIKSWEERYFVLDGYELHQFDGPDSATARRVVDLRGSVAKMREGDAEALSRERSASTQHRLFPFKLYDANHRLLHELAAKSTGDRSSWVETLTKASRFSAGSGDD 503
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1272.5482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJD9_ECTSI8.810e-8359.73PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 95..202
e-value: 3.2E-8
score: 43.3
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 109..199
e-value: 1.2E-7
score: 32.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 94..200
score: 11.599
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 86..201
e-value: 5.2E-15
score: 57.4
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 1..64
e-value: 1.2E-6
score: 30.4
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 2..64
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 97..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1272contigM-pyrifera_M_contig1272:15171..23080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1272.5482.1mRNA_M-pyrifera_M_contig1272.5482.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1272 15171..23080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1272.5482.1 ID=prot_M-pyrifera_M_contig1272.5482.1|Name=mRNA_M-pyrifera_M_contig1272.5482.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
MPVHVFHGKADHMVPIAAVEWMAEEMPACTLSVKMGGTHALLMDAGVLDC
VLEFICEDFKHFEEHAADRADGEAADERGPALSFPKHTFDHARHFKATGY
LCCREGMLMKAWKDRYFVLEGFGMYEYDGPSSSTARRVVDLRGTVAHVLM
DSAEAHASDPVNRLFPFKLVDAKHRVLYYLGANTTEDRALWVEILTKASR
FSMGSGEELEEFVSKRSLVTTTAGGSEGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf
IPR029058AB_hydrolase