mRNA_M-pyrifera_M_contig127105.5463.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A2D5ZFE9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5ZFE9_9BACT) HSP 1 Score: 130 bits (328), Expect = 3.980e-32 Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 25 DGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLALTEDVD-KFTIKKGPADGDVLVEAYG-RQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRIT 492
DG++R EL+ N +LGPIH+FD+SG +DA LEAFL+I+L L SI +T+ LA + LLD+ P P + P LATQSG T+TL L D TI GP G V+++ G R + +SGVN V G GGG+D I++ V ++ V++ GG G DR+T
Sbjct: 1740 DGKIRGDELLRNLQLGPIHVFDVSGRVDAGLEAFLEINLLLTSITKTYELARLTLLDYDF----PRPPDVFPVLATQSGSTVTLLLDPSGDDNVTILSGPTPGSVVIDKQGVRSQAFSGVNLVTGSAGGGNDVISVHPAVTVA--VDLDGGDGNDRLT 1891
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A2V6F2E3_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6F2E3_9BACT) HSP 1 Score: 120 bits (302), Expect = 1.210e-28 Identity = 71/175 (40.57%), Postives = 106/175 (60.57%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLAL------------TEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRI 489
+LHD N+DGR+R E++ + + GP+ +FD++G +D L AF+K+ +FS + F +A V LLDF + T P LA+QSG +TL + ++ + F IKKG ADG V+VEA+G + +SGV ++V GG G+D+ITIE VV+SA E+ GG G D +
Sbjct: 1529 MNLHDPNNDGRLRIDEILADLKRGPLCLFDMTGKIDGVLSAFVKVGFSIFSTTKHFEIARVTLLDFTFG--CDSNDGTPPVLASQSGDVLTLNMGPLASKRAHGDKSDGDEHFRIKKGSADGSVIVEAFGFDQEFSGVTKIVADGGAGNDTITIEPGVVVSA--ELSGGEGDDHL 1699
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A5C5WKQ8_9BACT (Bifunctional hemolysin/adenylate cyclase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WKQ8_9BACT) HSP 1 Score: 120 bits (300), Expect = 2.340e-28 Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFS-----IDETFTLAEVRLLDFAIERPTPAPGETLPALATQSG-GTITLALTEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRI 489
FDLHD + DG++R EL +N ELGPIH+FD+SG L A L A+ +I + +F + LAEV LL F ++RP + PA + + G G +T +++ D+FT+ G GDV+V + GRQE++SGV ++ G GG+D +TI + +AGV +GG G D+I
Sbjct: 3665 FDLHDQSGDGKIRLDELKDNIELGPIHVFDVSGQLSAKLFAYYEIGIRIFGKYKVIAGDEMELAEVVLLPFNLDRP---DDQGPPAFSNKDGAGLLTFVTSQNADQFTVAPGSNPGDVIVTSQGRQEMHSGVTAILFEGQGGNDRLTILEGI--TAGVTAYGGDGNDQI 3828
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A5B1CFJ5_9BACT (Bifunctional hemolysin/adenylate cyclase n=2 Tax=Rubripirellula obstinata TaxID=406547 RepID=A0A5B1CFJ5_9BACT) HSP 1 Score: 119 bits (297), Expect = 5.870e-28 Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQS-GGTITLALTEDVDKFTIKKGPADGDVLVEAYGRQE-LYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRIT 492
F+L+D + DGRVR E+ ENF LGPIH+FD+ G +DA + F ++ LF DE F +A V LL+F I RPT G LPALATQS GG +T+ T D ++I G G ++V+ GRQ + V +VG+ G GDD +TI + + V I GGAG D+++
Sbjct: 2110 FNLNDPDRDGRVRAGEIAENFALGPIHVFDVDGRVDAGVNGFYRV---LFFEDE-FEIARVNLLNFDIARPT---GAELPALATQSAGGELTIPFTSGDDDYSIIPGQTAGSIIVQGQGRQSGEFLNVTSIVGNSGSGDDIVTISPKIFVP--VTISGGAGNDQLS 2266
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A5C6EM67_9BACT (Bifunctional hemolysin/adenylate cyclase n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EM67_9BACT) HSP 1 Score: 117 bits (294), Expect = 1.490e-27 Identity = 77/197 (39.09%), Postives = 106/197 (53.81%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELG------PIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLAL----------------------------TEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRI 489
F+LHDNNDDG+VR EL++N LG P+HIFDI G LDA L A L I + FS E F LA + L +F RPT GE L LA GGT T A T++ D++ + GP G V++EA+GR ++Y+G+ ++VG+ G GDD I + +D+ + VE+ GG G D +
Sbjct: 1942 FNLHDNNDDGKVRLVELLDNTLLGTKDGFGPVHIFDIDGKLDAGLFADLTIGIGPFSYTEEFDLARITLFEFNFPRPT---GEGL-QLAQFIGGTNTEATNDGDAAHGTTLRLNIGANSADRSSLLFNTDEADEYKLYPGPQPGSVIIEAFGRSQVYTGITKIVGNAGLGDDKIIVSKDITIP--VELSGGVGNDTL 2132
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A4P5XZB5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5XZB5_9BACT) HSP 1 Score: 114 bits (284), Expect = 3.310e-26 Identity = 72/179 (40.22%), Postives = 103/179 (57.54%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGP--IHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLAL-------------TEDVDK---FTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKD 483
DLHDNN DG++R SE++EN +L P IHIFDISG ++A L A++++ I +TF + V LLDF + RP P P E P L T +GGT+T+ + +D K +I+ G ++V AYG E++ GV R+V G G+DSI+++R + L A I GG G D
Sbjct: 2232 LDLHDNNGDGKIRISEIVENIQLSPPPIHIFDISGKIEANLAAYVQV----LGIKKTFEIGRVTLLDFELPRPDPEPEEG-PLLGTLTGGTLTINIGPRAGIRAGGSNPNQDDSKDDVVSIRLGNHPQQIIVSAYGDTEVFDGVERIVADAGLGNDSISVDRAIKLPA--TILGGDGND 2403
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A2A2WK47_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula sp. SM50 TaxID=595453 RepID=A0A2A2WK47_9BACT) HSP 1 Score: 112 bits (281), Expect = 8.320e-26 Identity = 69/177 (38.98%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLAL----------------TEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKD 483
F+LHD +DDG++R EL+++ LGPIHIFD+SG+ DA L A + IDL + ID++F LAEV L F I P P T LA G + L + TE + I GPA G+++VE++GR + Y V ++ G G DD I++ DV + V + GG G D
Sbjct: 1928 FNLHDEDDDGKIRLVELLDSVLLGPIHIFDVSGSFDAKLFATVTIDLGVVEIDKSFDLAEVNLFKFDI----PRPDGTFAPLAELQGSNLVLNIGDRAGQRDPTGLFGIGTEQAIDYRILAGPAPGEIVVESFGRSQTYQNVAQITGAAGQFDDKISVSEDVTIP--VTLSGGDGND 2098
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A5C6A3I0_9BACT (Bifunctional hemolysin/adenylate cyclase n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6A3I0_9BACT) HSP 1 Score: 112 bits (281), Expect = 8.350e-26 Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELG------PIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALAT--------QSGGTITLAL------------TEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRI 489
F+LHDNNDDG+VR EL++N LG PIHIFD+SG LDA L A + ++ ID++FTL E L DFA RP G L T +G T+ L + T+ + + I G G V+VEA+GR ++Y+GV R+ G+ G GDD I I D+++ V I GG G D +
Sbjct: 2175 FNLHDNNDDGKVRLVELLDNTLLGASDGFGPIHIFDVSGKLDAKLFADITVNFGFVDIDKSFTLVEKTLFDFAFPRPA-GEGVQLAQCGTTKTNDCDASTGTTLVLNIGDLAPQRNFIYTTDVAEDYRIYAGAEPGMVIVEAFGRSQIYTGVKRITGNAGMGDDKIFISEDLMIP--VHITGGPGNDTL 2360
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A5C6A3K0_9BACT (Bifunctional hemolysin/adenylate cyclase n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6A3K0_9BACT) HSP 1 Score: 108 bits (271), Expect = 1.840e-24 Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDFAIERPTPAPGETLPALATQSGGTITLAL----------------TEDVDKFTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKDRI 489
F+L+D +DDG++R EL+++ LGPIHIFD+SG+ DA L A + IDL F ID+ F +A V L F + P P + LA G + L + E + + GP GD+LVE++GR +LY V ++ G G DD+I + D+ + V + GGAG D I
Sbjct: 1927 FNLYDGDDDGKIRLVELLDSVLLGPIHIFDVSGSFDAKLFATVTIDLGFFEIDKNFDIATVNLFKFDL----PRPDTSAAPLAELQGSNLVLNIGSRAGLRDSTGLLGIGNEQAVDYRLFAGPDPGDILVESFGRSQLYKNVTQITGTAGRFDDTIIVSEDITIP--VTLDGGAGNDLI 2099
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Match: A0A7Y4QMP6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7Y4QMP6_9BACT) HSP 1 Score: 107 bits (268), Expect = 4.460e-24 Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 1 FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFSIDETFTLAEVRLLDF------AIERPTPAPGETLPALATQSGGTITLAL-----------TEDVDK-FTIKKGPADGDVLVEAYGRQELYSGVNRVVGHGGGGDDSITIERDVVLSAGVEIFGGAGKD 483
+LHD N+DGR+R E++ GP+ +FDI+G +D L AF+K+ +FS + F +A V LLDF + + P P LA QSGG +TL + T D D+ F IK G G V+VEA+G + Y GV +++ GG G+DSIT+E V + A E GG G D
Sbjct: 1703 MNLHDPNNDGRMRLDEILHELSHGPLCLFDITGKIDGVLSAFVKVGFSIFSKTKRFEIARVTLLDFTAGCDHSFDEP--------PVLAAQSGGVLTLNMGARAGLRLSGNTSDGDESFVIKPGSVPGAVVVEAFGSSQEYFGVTKIIADGGLGNDSITVEPGVFVIA--EFAGGDGDD 1871 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127105.5463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127105.5463.1 >prot_M-pyrifera_M_contig127105.5463.1 ID=prot_M-pyrifera_M_contig127105.5463.1|Name=mRNA_M-pyrifera_M_contig127105.5463.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp FDLHDNNDDGRVRPSELIENFELGPIHIFDISGTLDAFLEAFLKIDLFLFback to top mRNA from alignment at M-pyrifera_M_contig127105:15..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127105.5463.1 ID=mRNA_M-pyrifera_M_contig127105.5463.1|Name=mRNA_M-pyrifera_M_contig127105.5463.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig127105:15..506- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127105:15..506- >mRNA_M-pyrifera_M_contig127105.5463.1 ID=mRNA_M-pyrifera_M_contig127105.5463.1|Name=mRNA_M-pyrifera_M_contig127105.5463.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig127105:15..506- (Macrocystis pyrifera P11B4 male)back to top |