mRNA_M-pyrifera_M_contig126894.5413.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517WM99_9PLAN (Type II secretion system protein F n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517WM99_9PLAN) HSP 1 Score: 310 bits (794), Expect = 8.360e-103 Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLI GSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMI+VADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL
Sbjct: 154 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLIFGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMINVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 321
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517QFS2_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QFS2_9PLAN) HSP 1 Score: 229 bits (584), Expect = 4.090e-71 Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I VSA T+KLESVIEDYI SER +Q+RHKLL + FYS +LILGS ILFYFLMTII+G++K L D G ELPGLT+LMI +D++ +GIK+ I +G L+WFSFDFL+ RA+RRR++N+IPVFG+ILSNTS++QFCR+LAGLIDARVKLPEAL LAAQMTRDPNL
Sbjct: 154 IRVSASTDKLESVIEDYIESERLLKQSRHKLLAALFYSAILILGSFILFYFLMTIILGSYKVLMLDLGIELPGLTILMIKTSDVIANYGIKMLLITLGSALLVWFSFDFLRMRAMRRRMINRIPVFGTILSNTSVAQFCRILAGLIDARVKLPEALTLAAQMTRDPNL 321
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A518AFM1_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFM1_9PLAN) HSP 1 Score: 215 bits (547), Expect = 1.460e-65 Identity = 114/168 (67.86%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I VSA T KLESVIEDYI SER +Q+RHKLLT Y+ LILGSLILFYFL I+ +FK L D GTELPGLT+ M ++D+L+KHG+KI I +G LIWFSFDFL+ +A RRR++N IPVFG+ILSNT+I+QFCR+LAGLIDA VKLP+AL LAAQMTRDPNL
Sbjct: 154 IRVSASTGKLESVIEDYIESERLLKQSRHKLLTVLSYAAFLILGSLILFYFLFAFILRSFKELLLDLGTELPGLTISMFRISDVLSKHGVKIMLITLGSTLLIWFSFDFLRMQAARRRIINLIPVFGAILSNTAIAQFCRILAGLIDAGVKLPDALTLAAQMTRDPNL 321
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517RPJ3_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RPJ3_9PLAN) HSP 1 Score: 185 bits (469), Expect = 6.280e-54 Identity = 95/168 (56.55%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I A T +LES+IEDYI S+R Q+RHKL+TS FYS VLILG+ +LF FLM +V +F+S+F DFGTELPG+T+L++ ++D L +G+ + I++ + IWFSFD K +A+RRRL+NQIP+ GSILS+ SI+ FCRMLA +I+A++KLPEA+ LAA+ T+DPNL
Sbjct: 152 IRAGAQTAQLESIIEDYIESQRVLMQSRHKLMTSLFYSSVLILGAFLLFDFLMISVVRSFRSIFLDFGTELPGITILVMRISDFLVAYGLPMLAILMFSFAGIWFSFDLFKMQAIRRRLINQIPILGSILSSISIALFCRMLATIIEAKIKLPEAIDLAAKATKDPNL 319
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A517VP89_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VP89_9PLAN) HSP 1 Score: 184 bits (467), Expect = 1.370e-53 Identity = 97/169 (57.40%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKI-AFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I A T KLES+IEDYI S+R Q RH++L S FY+ VL+ GS +LFYFL+ +V NFKS+F DFGTELPG+T+L S++D ++ G I A+ ++ + WFSFD LK +A RRRLLN IP+FGSIL+ TSI+QFCRMLA +I+A +KLP+A+ LAA TRDPNL
Sbjct: 156 IRAGAQTGKLESIIEDYIESQRLMAQTRHRILISVFYTSVLVFGSFLLFYFLLVTVVSNFKSIFLDFGTELPGITILAFSISDFFSQFGFPIVAYPIVFALG-FWFSFDLLKLQATRRRLLNLIPIFGSILNYTSIAQFCRMLASIIEANIKLPKAIELAADSTRDPNL 323
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A518IL71_9PLAN (Type II secretion system protein F n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IL71_9PLAN) HSP 1 Score: 178 bits (452), Expect = 2.120e-51 Identity = 90/162 (55.56%), Postives = 127/162 (78.40%), Query Frame = 1
Query: 19 TEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
TE+LES+IE+YI S+R Q+RHK++TS FYS VL+LG+ LFYFLM +V NF+S+F DFG ELP +T+L IS+++ L+ +G+ I++ + IWFSFD K +A+RRRL+N IP+ G+IL+ TSI+ FCRMLA +I+A++KLPEA+ LAA+ T+DPNL
Sbjct: 158 TEQLESIIENYIESQRLLVQSRHKVMTSLFYSCVLVLGTFSLFYFLMVSVVTNFQSIFIDFGIELPTITILTISISNFLSSYGLSALAILLFSFAGIWFSFDLFKMQAIRRRLINHIPILGNILNYTSIALFCRMLATIIEAKIKLPEAIELAAKTTKDPNL 319
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A2E2BWK7_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BWK7_9PLAN) HSP 1 Score: 168 bits (425), Expect = 2.150e-47 Identity = 92/172 (53.49%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLI----WFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I A T LES+IEDYI S+R Q+RHK+ S FYS VLI S +L YFLM +V +F+S+FE FGTELP LTVL ++DLL++HG++I +G L+ WF FD K + +RRRL+N+IPVFG ILSNTS +QFCRMLA + +A++ LP+A+ L+A+ T DPNL
Sbjct: 152 ILAGAQTAHLESIIEDYIESQRCLAQSRHKIQISLFYSGVLIAASFLLLYFLMVTVVASFESIFEGFGTELPSLTVLAFQISDLLSEHGLQI----LGWFLLLSVAFWFGFDLFKLQPVRRRLINKIPVFGGILSNTSYAQFCRMLATMTEAKIYLPDAIELSAKTTNDPNL 319
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A2E7D8E6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D8E6_9PLAN) HSP 1 Score: 111 bits (278), Expect = 5.440e-26 Identity = 65/168 (38.69%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I T L V+E Y+ R R + ++L + Y + LIL ++ + + + +V FK +F DFGTELPGLT+L+IS++D L++ GI I I++ L W L + + RRRLL +IPVFG + S +S+SQFC++LA L++ +V++P+AL +A + + NL
Sbjct: 146 IQAGLKTGNLGVVMEQYLMFTRNRSEIGRRVLLTLSYPVCLILCTIGINFGYLAWVVPLFKKIFLDFGTELPGLTMLIISLSDALSEFGIAIVVILVAAAVLAWLITVVLLRPSTRRRLLEKIPVFGPLFSMSSLSQFCQLLAILVENQVRMPDALRMAGTASGNANL 313
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: A0A7C4QLH1_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QLH1_9PLAN) HSP 1 Score: 94.7 bits (234), Expect = 4.740e-20 Identity = 59/168 (35.12%), Postives = 94/168 (55.95%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRALRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRDPNL 504
I +S ++E +I DY+ + R+ R L+ Y +VL+L L + FLM+ ++ FK+LFE+FGTELP LT + V+D+L HG +A + +G +++ + RA+ + L IP+ G L S+S +C +LA L++ V LP+AL AA D L
Sbjct: 78 IAISLPGGQVELLIHDYLENARRLSDLRRSLILGLTYPLVLLLVFLAVMVFLMSTLLPMFKNLFEEFGTELPALTEFFLKVSDVLVNHGWAVAGVGLGLAAIVLGALRVFGGRAVVQNLWRSIPLLGQGLRWASLSNYCHLLATLMELHVPLPQALRAAATANDDKAL 245
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Match: UPI00142249B7 (type II secretion system F family protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00142249B7) HSP 1 Score: 87.0 bits (214), Expect = 4.880e-17 Identity = 56/170 (32.94%), Postives = 95/170 (55.88%), Query Frame = 1
Query: 1 IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYFLMTIIVGNFKSLFEDFGTELPGLTVLMISVADLLTKHGIKIAFIVIGGMSLIWFSFDFLKKRA-----LRRRLLNQIPVFGSILSNTSISQFCRMLAGLIDARVKLPEALMLAAQMTRD 495
+ V + ++ V+ +Y+ R+ + RHK + S Y+ V+ + + + I+V FKS+F DF TELPGLTV ++S++D L +GI I ++ LI F RA ++R+L +P+ G L + ++++F RML+ L++ LPEA+ LAA+ T D
Sbjct: 129 VEVGVRSGRIGEVLSEYVKQSRKYMELRHKAMYSIGYAAVVGAACIAVLLVFLLILVPQFKSIFIDFNTELPGLTVAVLSLSDTLRTYGILILAVL-----LILFFLGVRIARAGQWSVWKQRVLRWVPIIGPTLRHMTLARFTRMLSLLVENNTPLPEAVRLAARATND 293 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126894.5413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126894.5413.1 >prot_M-pyrifera_M_contig126894.5413.1 ID=prot_M-pyrifera_M_contig126894.5413.1|Name=mRNA_M-pyrifera_M_contig126894.5413.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp IHVSAGTEKLESVIEDYIASERQRRQARHKLLTSFFYSIVLILGSLILFYback to top mRNA from alignment at M-pyrifera_M_contig126894:3..506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126894.5413.1 ID=mRNA_M-pyrifera_M_contig126894.5413.1|Name=mRNA_M-pyrifera_M_contig126894.5413.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig126894:3..506+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126894:3..506+ >mRNA_M-pyrifera_M_contig126894.5413.1 ID=mRNA_M-pyrifera_M_contig126894.5413.1|Name=mRNA_M-pyrifera_M_contig126894.5413.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig126894:3..506+ (Macrocystis pyrifera P11B4 male)back to top |