mRNA_M-pyrifera_M_contig126849.5400.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A2P6NSS3_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NSS3_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 6.970e-13 Identity = 32/66 (48.48%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 25 MSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
MSFW++F +N+G+AI++IL+ E +TLE+LL+E++I+ E K QNK+LI++ E TL L+ + EE
Sbjct: 1 MSFWKTFGFNTGTAIDSILDGEDYTLEQLLDEEEIIQETKAQNKRLIEFFVEPETLKKLLYYITEE 66
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A8J5KX93_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KX93_ZINOF) HSP 1 Score: 71.2 bits (173), Expect = 9.650e-13 Identity = 31/64 (48.44%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 31 FWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
FWR S++ GS + +IL+KE+FTLE+LL+ED+++ E K QN +LID+L E++ + L++ +VEE
Sbjct: 2 FWRMSSFSQGSPVESILDKENFTLEDLLDEDEVIQECKAQNSRLIDFLKEKSQVEKLLRYIVEE 65
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A5B7AZ71_DAVIN (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7AZ71_DAVIN) HSP 1 Score: 67.4 bits (163), Expect = 1.190e-12 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 31 FWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
FWR ++ S + TIL+KE+FTLEELL+ED+I+ E K N +LI++L ERA + L++ +VEE
Sbjct: 2 FWRMAGLSTASPVETILDKENFTLEELLDEDEIIQECKALNSRLINFLRERAQVEQLLRYIVEE 65
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A7S4PFK4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PFK4_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 1.300e-12 Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 25 MSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLI 204
M+FWR+F +++ S + TILEK++FTLEELL+E+D+L E K+QN+KL+DYL TL L+
Sbjct: 1 MTFWRTFGFHTVSPVETILEKDNFTLEELLDEEDLLQECKSQNQKLLDYLLRVDTLDKLL 60
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A453EZF4_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453EZF4_AEGTS) HSP 1 Score: 68.9 bits (167), Expect = 2.150e-12 Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 1 PRIYGAAKMSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
PR AA M FWR ++ S ++TIL+KE+FTLEELL+ED+I+ E K N +LI++L ++A + L++ VVEE
Sbjct: 80 PRSTAAATM-FWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNTRLINFLRDKAQVEQLLRYVVEE 152
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A7J8Y6M6_GOSAI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium aridum TaxID=34290 RepID=A0A7J8Y6M6_GOSAI) HSP 1 Score: 69.3 bits (168), Expect = 4.490e-12 Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 4 RIYGAAKMSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
R Y AKM FWR ++S S I+ IL+K++FTLEELL+ED+I+ E K+ N KLI++L E+A + LI+ +V E
Sbjct: 69 RCYNLAKM-FWRMTGYSSTSPIDAILDKDNFTLEELLDEDEIIQECKSLNGKLINFLREKAQVEQLIQYIVVE 140
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A453EZ10_AEGTS (Uncharacterized protein n=10 Tax=Poaceae TaxID=4479 RepID=A0A453EZ10_AEGTS) HSP 1 Score: 68.9 bits (167), Expect = 6.210e-12 Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 1 PRIYGAAKMSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
PR AA M FWR ++ S ++TIL+KE+FTLEELL+ED+I+ E K N +LI++L ++A + L++ VVEE
Sbjct: 59 PRSTAAATM-FWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNTRLINFLRDKAQVEQLLRYVVEE 131
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A8J5V3C8_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5V3C8_ZIZPA) HSP 1 Score: 65.9 bits (159), Expect = 7.840e-12 Identity = 31/64 (48.44%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 31 FWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
FWR ++ S ++TIL+KE+FTL+ELL+ED+I+ E K N +LI++L +RA + L++ VVEE
Sbjct: 2 FWRMTGLSAASPVDTILDKENFTLDELLDEDEIIQECKALNSRLINFLRDRAQVEQLLRYVVEE 65
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A7S4IW04_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IW04_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 8.440e-12 Identity = 33/66 (50.00%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 25 MSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
M+FWR++SW++ SAI+++L+ E TLE+LL+E+DIL+E K QNKKLID+L + + L + V +E
Sbjct: 4 MAFWRTWSWDA-SAIDSLLDSEDLTLEQLLDENDILTEAKAQNKKLIDFLTKESNLLQFVSYVTDE 68
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Match: A0A022RRT9_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RRT9_ERYGU) HSP 1 Score: 68.6 bits (166), Expect = 8.520e-12 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 31 FWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLYERATLGTLIKLVVEE 222
FW +++ SA+ TIL+KESFTLEELL+ED+I+ E K N +L+ +L ERA + LI+ ++EE
Sbjct: 2 FWHMSGFSAASAVETILDKESFTLEELLDEDEIIQECKAHNGRLVSFLRERAQVKQLIRYIMEE 65 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126849.5400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126849.5400.1 >prot_M-pyrifera_M_contig126849.5400.1 ID=prot_M-pyrifera_M_contig126849.5400.1|Name=mRNA_M-pyrifera_M_contig126849.5400.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp MSFWRSFSWNSGSAINTILEKESFTLEELLNEDDILSELKTQNKKLIDYLback to top mRNA from alignment at M-pyrifera_M_contig126849:9..345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126849.5400.1 ID=mRNA_M-pyrifera_M_contig126849.5400.1|Name=mRNA_M-pyrifera_M_contig126849.5400.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=337bp|location=Sequence derived from alignment at M-pyrifera_M_contig126849:9..345- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126849:9..345- >mRNA_M-pyrifera_M_contig126849.5400.1 ID=mRNA_M-pyrifera_M_contig126849.5400.1|Name=mRNA_M-pyrifera_M_contig126849.5400.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig126849:9..345- (Macrocystis pyrifera P11B4 male)back to top |