mRNA_M-pyrifera_M_contig126735.5382.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A1Q3GS27_9BACT (Aamy domain-containing protein n=2 Tax=Cytophagales TaxID=768507 RepID=A0A1Q3GS27_9BACT) HSP 1 Score: 117 bits (294), Expect = 1.590e-27 Identity = 72/177 (40.68%), Postives = 110/177 (62.15%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHNGSDQKP-DLSRSSTGWY-DGGWVSEPTAPQDTEAPTLTISLSGGNYT--SAVTVTLSATDNQDSSPTINYTLNGTSFSAEGST---SITISQATTLVASATDDSNNISASQTHPYTFNPS-SNLLIHYKGT-LSTPYIYYWAATPNGEQSSGWPGSTMT 504
W ++ F+G+ S+NLLFH+ + K D+SR+ GWY DG W + P+LT++ GGN++ ++ VTL+++D+ D SP I YTL+G++ S ++ SI ++Q TTL A A D+ S+ TH YTF + S L +H+K + P IYYWA TP+G Q++ WPG +MT
Sbjct: 736 WYRFDFNGVISSNLLFHDNAGNKTIDMSRNKDGWYQDGQWFDQDPRVSVNLPPSLTVTPGGGNFSVGQSIQVTLASSDDNDPSPVIYYTLDGSTPSTSSTSYSGSINLTQTTTLKAIAVDNQGLASSVATHTYTFTTAPSGLTVHFKPNGYNNPTIYYWAVTPSG-QTTTWPGVSMT 911
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A150AI37_9BACT (HYR domain-containing protein n=5 Tax=Flammeovirga TaxID=59739 RepID=A0A150AI37_9BACT) HSP 1 Score: 110 bits (276), Expect = 4.210e-25 Identity = 72/175 (41.14%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 7 KYTFSGITSTNLLFHNGSDQ--KPDLSRSSTGWYDGGWVSEPTAPQDTEAPTLTISLSGGNYTSAVTVTLSATDNQDSSPTINYTLNGT-----SFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFN-PSSNLLIHYKGTLSTPYIYYWAATPNGEQSSG-WPGSTMT 504
+YT G T TNL+ G + +++ WYD GW+ EP DTEAPT++IS SG + A +T+SA+DN+D+SPTI YTL+G+ S SAEG +++ISQ TT+ A A DD+ N S T +T PS ++ K +IY+W A+P G ++ WPG +MT
Sbjct: 905 EYTIDG-TCTNLILLCGDTKITGDEMNICGNVWYDNGWIDEPITTPDTEAPTVSISPSGSTFVGAGNITISASDNRDASPTIYYTLDGSTPTLSSTSAEGQVTLSISQTTTVSAIAVDDAGNTSTVSTASFTVTAPSGGFTVYAKDYT---HIYHWNASPTGALANATWPGVSMT 1075
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: UPI00191D2E5F (starch-binding protein n=1 Tax=Aquimarina mytili TaxID=874423 RepID=UPI00191D2E5F) HSP 1 Score: 108 bits (271), Expect = 1.950e-24 Identity = 74/175 (42.29%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFH-NGSDQKPDLSRSSTGWY-DGGWVSEPTAPQDTEAPTLTISLSGGNYTSA--VTVTLSATDNQDSSPTINYTLNG---TSFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFNPSS-NLLIHYKGTLSTPYIYYWAATPNGEQSSGWPGSTM 501
W KY F G+ S NLLF NGS++ PDLSR+ GWY DG W PTL +S GG+++ V+V+LSA+D+ S I YTLNG T+ S S+SIT+++ TT+ A A D S ++ +TF+ S+ ++ I+YKG +S P +YYW TP S+ WPG +M
Sbjct: 734 WYKYIFEGVESINLLFSDNGSNKTPDLSRNRDGWYEDGIWYDTQPGGNTNTPPTLAMSPDGGSFSEGDTVSVSLSASDDNPSGVLIYYTLNGDQPTNTSNLYSSSITLTENTTVKAIAYDSEGLSSNVISNTFTFSTSTGSMTIYYKGPISNPNLYYWDTTPVNT-STNWPGISM 907
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A1H5ZNM8_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Halpernia humi TaxID=493375 RepID=A0A1H5ZNM8_9FLAO) HSP 1 Score: 107 bits (268), Expect = 4.920e-24 Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHNGS----DQKPDLSRSSTGWYDGGWVSEPTAPQDTEAPTLTISLSGGNYTSA--VTVTLSATDNQDSSPTINYTLNGT-----SFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFNPSSNLLIHYKGTLS-------TPYIYYWAATPNGEQSSGWPGSTM 501
W YTF+GI+STN++F+NG+ +Q DLS + T +YDG + + P P L IS SGG + S V V LSATD+ D +PTI YT NGT S S G+ +++IS TTL A A + ++ +SA +T Y F+ SS + +H+K + TP +YYW T ++ WPG+ M
Sbjct: 808 WYSYTFTGISSTNIIFNNGTGGAGNQTADLSANGTAYYDGTTNTWLSTPPTISNPCLKISPSGGTFASGTPVNVVLSATDSTDPNPTIYYTTNGTEPSVFSSSFTGNGNLSISANTTLKAFAKNSTDEMSAVKTEIYNFS-SSGITVHFKPDPTAAGWNGVTPRVYYWNMTGGAVPAATWPGNLM 991
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A3Q9FKP0_9BACT (Starch-binding protein n=3 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FKP0_9BACT) HSP 1 Score: 105 bits (262), Expect = 3.190e-23 Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 1
Query: 7 KYTFSGITSTNLLFHNGSDQKPDLSRSSTG--WYDGGWVSEPTAPQDTEAPTLTISLSGGNYTSAVTVTLSATDNQDSSPTINYTLNGT-----SFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFNPSSNLLIHYKGTLSTPYIYYWAATPNGE-QSSGWPGSTMT 504
+YT G T+TNL+ G+ + G WYD GW+ PT DT AP+++IS +G ++ + TVT+SATD++DS+PTI YTL+GT S SA+ S +TI+++TT+ A A DD+ N+SA + + Y T I++W+A P G SS WPG TM+
Sbjct: 919 EYTIEGATTTNLILLCGATKVTGDEMGVAGDVWYDNGWIPNPTPTPDTVAPSISISPNGATFSGSGTVTISATDDKDSTPTIYYTLDGTTPTTTSLSAQSSLVLTITESTTVKAFAQDDTLNVSAFVSANFVVEEVQGGFTVY--TQGYENIHHWSAEPTGAFASSAWPGVTMS 1090
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: L8JY49_9BACT (Periplasmic alpha-amylase n=2 Tax=Fulvivirga TaxID=396811 RepID=L8JY49_9BACT) HSP 1 Score: 102 bits (254), Expect = 3.720e-22 Identity = 74/177 (41.81%), Postives = 99/177 (55.93%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHN-GSDQKPDLSRSSTGWY-DGGWVSEPTAPQDTEAPTLTISLSGGNYTSA--VTVTLSATDNQDSSPTINYTLNGTSFSAEGST----SITISQATTLVASATDDSNNISASQTHPYTFNP-SSNLLIHYKGTLST-PYIYYWAATPNGEQSSGWPGSTM 501
W KYTF G+ TNL+F+N GS Q DLSR GWY DG W E P ++ + +GG++ + V+VTLSATD+ D SP I YT +GT+ + ST +I ++ TTL A DD SA +T Y F L +H+K T P IY+W TP+ Q++ WPG TM
Sbjct: 707 WYKYTFDGVICTNLIFNNSGSPQTGDLSRCKDGWYVDGIWYDTDQWGPVNEVPDVSANPAGGSFMTGDVVSVTLSATDDNDPSPDIYYTTDGTT-PTQASTLYTGAIELTTTTTLKVIAYDDQEAASAVETFEYNFESIGGGLTVHFKPAGYTDPEIYFWNVTPSA-QTTTWPGVTM 881
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A364Y1Z0_9BACT (Aamy domain-containing protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364Y1Z0_9BACT) HSP 1 Score: 101 bits (251), Expect = 9.440e-22 Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHN-GS--DQKPDLSRSSTGWYDGG-WVSEPTAPQDTEAPTLTISLSGGNYT--SAVTVTLSATDNQDSSPTINYTLNGT-----SFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFNPSSNLLIHYK---GTLSTPYIYYWAATPNGE-QSSGWPGSTM 501
W +TF +TSTNL+F++ GS ++ DLSR++ GWY GG W P+ T P + G Y+ SAV++T++ATDN +++PTI YTL+GT S A GSTS+ I TTL A D+ + S QTH YT + ++++ +T I+YW A+P+G ++ WPG M
Sbjct: 733 WHTFTFPNVTSTNLIFNDTGSTTNKTVDLSRNTNGWYKGGAWYDS--NPEATNTPPVVNVSPAGPYSGNSAVSITITATDNSETAPTIYYTLDGTTPTSNSTQAVGSTSLNIISTTTLKVFAVDNQSLASNIQTHQYTIGTYNGFTVYFRKPSAWSTTVKIHYWNASPSGSVTATTWPGVDM 912
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: UPI001F12A60E (starch-binding protein n=1 Tax=Flavobacterium sp. HJ-32-4 TaxID=1160795 RepID=UPI001F12A60E) HSP 1 Score: 100 bits (250), Expect = 1.280e-21 Identity = 77/186 (41.40%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHNGS----DQKPDLSRSSTGWYD---GGWVSEPTAPQDTEAPTLTISLSGGNYT--SAVTVTLSATDNQDSSPTINYTLNGTSFSAEGSTSIT------ISQATTLVASATDDSNNISASQTHPYTFNPSSNLLIHYKGTLS--TPYIYYWAATPNGEQSS-GWPGSTMT 504
W YTF+G+TS N++F+NGS +Q DL + WYD WVS PT+ AP LTI+ GG +T + V VTL+ATDN DS P I YT++G S + ST++ IS TTL A A D N S +T Y F + +++K TP IYYW P S WPG TMT
Sbjct: 807 WYHYTFTGVTSVNVVFNNGSGGSGNQTADLVVQTDAWYDVTSASWVSGPTSG----APCLTIAPPGGTFTVGNTVNVTLTATDN-DSQPLIYYTVDG-STPTDASTAVASGFQLPISTTTTLKAFAKDMGGNASPVKTETYQFIQQTGFTVYFKPPAGWPTPKIYYWNVQPTSAMPSVTWPGVTMT 986
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: UPI00165F6289 (starch-binding protein n=3 Tax=unclassified Flammeovirga TaxID=2637820 RepID=UPI00165F6289) HSP 1 Score: 98.6 bits (244), Expect = 8.050e-21 Identity = 67/176 (38.07%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHNGSDQKPD-LSRSSTGWYDGGWVSEPTA-PQDTEAPTLTISLSGGNYTSAVTVTLSATDNQDSSPTINYTLNGTSFS--AEGSTSITISQATTLVASATDDSNNISASQTHPYTFNPSSN---LLIHYKGTLSTPYIYYWAATPNGEQSSG-WPGSTMT 504
+ +YT G + +L +GS D ++ WYD GWV EP DTEAPT +I+ GG + +VT+TLSATDN+D++P I Y+ +G++ S A GST++T++ T+ A D S N S + +T N ++ +H KG IY+W A P+G ++ WPG+TMT
Sbjct: 552 YYEYTIEGSCTNLILLCDGSKVTDDEMNICGDVWYDNGWVPEPQPITPDTEAPTTSITPDGGTFDGSVTITLSATDNEDTNPKIYYSTDGSTPSEVAYGSTTVTLTADATVQYYAEDASGNTSTLASSSFTVNENNTGGGFKVHVKGYNM---IYHWGAVPSGSVANAVWPGATMT 724
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Match: A0A1S1Z0H4_9BACT (Aamy domain-containing protein n=2 Tax=Flammeovirga pacifica TaxID=915059 RepID=A0A1S1Z0H4_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 3.900e-20 Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 1 WMKYTFSGITSTNLLFHNGSDQKPDLSRSSTG--WYDGG--WVSEPTAPQ-DTEAPTLTISLSGGNYTSAVTVTLSATDNQDSSPTINYTLNGT-----SFSAEGSTSITISQATTLVASATDDSNNISASQTHPYTFN-PSSNLLIHYKGTLSTPYIYYWAATPNGE-QSSGWPGSTMT 504
+ +YT G T TNL+ GS + + + G WY+ G WV +P D APT++IS + G+Y+++V+VT+S++D++DSSPTI YTL+G+ S SAE + + T++ A T+ A A DDS+N+S+ +T YT + P +H G +++W A P G SS WPG ++T
Sbjct: 902 YYEYTIDG-TCTNLILLCGSSKVTEDEMNICGDVWYEEGIGWVEDPNKENFDIIAPTVSISPNSGDYSNSVSVTISSSDDRDSSPTIYYTLDGSTPTMSSTSAEKTVTFTVTDAMTVKAIAIDDSSNVSSVETMNYTISIPQGGFTVHAYGYTM---MHHWGAIPTGSITSSSWPGVSLT 1077 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126735.5382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126735.5382.1 >prot_M-pyrifera_M_contig126735.5382.1 ID=prot_M-pyrifera_M_contig126735.5382.1|Name=mRNA_M-pyrifera_M_contig126735.5382.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp MKYTFSGITSTNLLFHNGSDQKPDLSRSSTGWYDGGWVSEPTAPQDTEAPback to top mRNA from alignment at M-pyrifera_M_contig126735:1..504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126735.5382.1 ID=mRNA_M-pyrifera_M_contig126735.5382.1|Name=mRNA_M-pyrifera_M_contig126735.5382.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig126735:1..504+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126735:1..504+ >mRNA_M-pyrifera_M_contig126735.5382.1 ID=mRNA_M-pyrifera_M_contig126735.5382.1|Name=mRNA_M-pyrifera_M_contig126735.5382.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig126735:1..504+ (Macrocystis pyrifera P11B4 male)back to top |