mRNA_M-pyrifera_M_contig126684.5375.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A518AD87_9PLAN (Xanthan lyase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518AD87_9PLAN) HSP 1 Score: 286 bits (733), Expect = 1.690e-90 Identity = 147/167 (88.02%), Postives = 156/167 (93.41%), Query Frame = 1
Query: 7 LLAALFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
L + LFL + L+A Q + ++P +ADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVL E+RLQSVQKAGTQIKELVT+ GRFAAQVF
Sbjct: 12 LTSLLFLFPNLLQAEQADARQPSRADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLTERRLQSVQKAGTQIKELVTSGGRFAAQVF 178
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A2E3GYH7_9PLAN (Xanthan lyase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E3GYH7_9PLAN) HSP 1 Score: 244 bits (622), Expect = 4.670e-74 Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 4 LLLAALFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
LL AA S +A Q+ + ADV+VYG+TPGGFCAAIAAAREGA VILLEPTDH+GGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIE+DYADRGITLPY+VSVK+Q++WTYEPHVA RVTR+MLDEAGV VL EQ LQSV+KAGTQI L T GRF ++F
Sbjct: 14 LLPAAFIRADSATKAEQSSESTT--ADVVVYGSTPGGFCAAIAAAREGASVILLEPTDHVGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEQDYADRGITLPYQVSVKNQARWTYEPHVAARVTREMLDEAGVTVLTEQWLQSVEKAGTQIVGLTTKNGRFTGKMF 179
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A517XIJ0_9PLAN (Xanthan lyase n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XIJ0_9PLAN) HSP 1 Score: 241 bits (616), Expect = 2.960e-73 Identity = 125/171 (73.10%), Postives = 143/171 (83.63%), Query Frame = 1
Query: 7 LLAALFLLQ----SPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
L +ALFLL + + A + + +AD++VYGATPGG CAAIAA+REGA VILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDY+ RGI LPY+V VKDQSKWTYEPHVA+RVT+QMLDEA VKVLP+Q LQSV+K GT+I LVT+ G FAA+ F
Sbjct: 5 LFSALFLLSLILPTGVSAREQADGRGTRADIVVYGATPGGVCAAIAASREGATVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYSARGIKLPYQVRVKDQSKWTYEPHVALRVTKQMLDEAHVKVLPKQVLQSVRKEGTRISSLVTDNGAFAAKTF 175
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A518IEN2_9PLAN (Xanthan lyase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IEN2_9PLAN) HSP 1 Score: 240 bits (613), Expect = 8.300e-73 Identity = 124/163 (76.07%), Postives = 137/163 (84.05%), Query Frame = 1
Query: 19 LFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
L +L + L A + EQQ+ +ADV+VYGATPGGFCAAIAAARE A VILLE TDH+GGLNTGGLSFSDSNQ VRSTVMGLFDEWH RIEKDYADRG+ LPY V VKDQSKWTYEPHVAMRVTR ML EA VKVL ++ LQSV+K GT+I ELVT+ G FAA VF
Sbjct: 14 LLILPTCLFAQKPEQQEVTRADVVVYGATPGGFCAAIAAAREKASVILLETTDHVGGLNTGGLSFSDSNQIVRSTVMGLFDEWHRRIEKDYADRGVKLPYSVGVKDQSKWTYEPHVAMRVTRNMLREANVKVLTKRDLQSVKKQGTRITELVTSDGTFAANVF 176
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A257M7M1_9BACT (Xanthan lyase n=1 Tax=Verrucomicrobiales bacterium VVV1 TaxID=2015575 RepID=A0A257M7M1_9BACT) HSP 1 Score: 234 bits (598), Expect = 8.950e-72 Identity = 122/170 (71.76%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 1 SLLLAAL-FLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
+LL AAL ++ SPLRAA ++DVIVYGATPGGFCAAIAAAREGA VILLEPTDH+GG+NTGGLSFSDSNQTVRSTVMGLFDEWH+RIEKDY RG+TLPY VSVKDQ+KWTYEPHVA R+T+QMLDEA VKVL ++ L S++K G +I L+T+ G F+A+VF
Sbjct: 18 ALLFAALSWISLSPLRAAS-------ESDVIVYGATPGGFCAAIAAAREGASVILLEPTDHVGGVNTGGLSFSDSNQTVRSTVMGLFDEWHSRIEKDYISRGVTLPYSVSVKDQAKWTYEPHVAARITKQMLDEAKVKVLTKRSLTSLKKDGARITRLITSDGEFSAKVF 180
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A518CP27_9PLAN (Putative FAD-binding dehydrogenase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CP27_9PLAN) HSP 1 Score: 236 bits (601), Expect = 5.320e-71 Identity = 119/163 (73.01%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 19 LFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
L L L ++P AD++VYGATPGGFCAAIAAAREGA VILLEPTDH+GGLNTGGLSFSDSNQTVRST+MGLFDEWHTRI++DYA RGI LPY VSVKDQS WTYEPHV+ RVTRQMLDEAGV VL E+ L SVQK GT+I LVT G F+ VF
Sbjct: 13 LLTLHLTLETGNVVAEEPDHADIVVYGATPGGFCAAIAAAREGASVILLEPTDHVGGLNTGGLSFSDSNQTVRSTMMGLFDEWHTRIQEDYASRGIELPYDVSVKDQSAWTYEPHVSARVTRQMLDEAGVTVLTERYLSSVQKEGTRINSLVTKDGTFSGDVF 175
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A2E9VXD9_9PLAN (Xanthan lyase n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VXD9_9PLAN) HSP 1 Score: 234 bits (596), Expect = 2.160e-70 Identity = 116/144 (80.56%), Postives = 129/144 (89.58%), Query Frame = 1
Query: 76 KADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
KADVIVYGATPGG CAAIAA+REGA VILLEPTDHIGG+NTGGLSFSDSNQTVRSTVMGLFDEWHTRIE DY RGI LPY+VSVKDQSKWTYEPHVA R+TRQML+EA VKVL E L+SV+K G++I L+TN+G F+A+VF
Sbjct: 31 KADVIVYGATPGGCCAAIAASREGASVILLEPTDHIGGMNTGGLSFSDSNQTVRSTVMGLFDEWHTRIESDYDSRGIRLPYQVSVKDQSKWTYEPHVAARITRQMLNEANVKVLTEHVLKSVEKEGSKITSLMTNKGTFSAKVF 174
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: M5RZI5_9BACT (Secreted protein, putative xanthan lyase (Fragment) n=1 Tax=Rhodopirellula maiorica SM1 TaxID=1265738 RepID=M5RZI5_9BACT) HSP 1 Score: 223 bits (569), Expect = 3.070e-70 Identity = 117/165 (70.91%), Postives = 133/165 (80.61%), Query Frame = 1
Query: 13 AALFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
A + L SP +AA +ADVIVYG+TPGGFCAAIAAAREGA VI+LEPTDH+GG+NTGGL FSDSNQTVRSTVMGLFDEWH RI++DY RGITLPY VSVKDQSKW+YEPHVA RVT+QMLDEA V VL E+ L+SV K G +I L TN G F+A+VF
Sbjct: 21 ALVISLSSPSQAAT-------EADVIVYGSTPGGFCAAIAAAREGASVIMLEPTDHVGGVNTGGLCFSDSNQTVRSTVMGLFDEWHRRIQQDYKSRGITLPYDVSVKDQSKWSYEPHVAARVTQQMLDEAKVTVLTERVLESVAKEGAKITTLHTNAGDFSAKVF 178
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A517Y8P0_9BACT (Ribulose-1,5-biphosphate synthetase n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517Y8P0_9BACT) HSP 1 Score: 233 bits (593), Expect = 7.100e-70 Identity = 120/167 (71.86%), Postives = 135/167 (80.84%), Query Frame = 1
Query: 7 LLAALFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
+LAA+ L + A Q KADV+VYG+TPGG CAAIAAAREGA VILLEPT+HIGGLNTGGLSFSDSNQTVRSTVMGLFDEWH+RIE+DY +RG+ LPYKV +KDQSKWTYEPHVA RVTRQMLDEAGV VL + LQSV K G +I +VTN G F A+VF
Sbjct: 7 ILAAVVFLCCGMTAVQASDAS--KADVVVYGSTPGGVCAAIAAAREGASVILLEPTNHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHSRIERDYTERGVVLPYKVGIKDQSKWTYEPHVAARVTRQMLDEAGVTVLTNRYLQSVIKEGNRITSVVTNDGTFTAKVF 171
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Match: A0A4R7RP64_9BACT (FAD dependent oxidoreductase n=1 Tax=Prosthecobacter fusiformis TaxID=48464 RepID=A0A4R7RP64_9BACT) HSP 1 Score: 232 bits (592), Expect = 8.490e-70 Identity = 113/148 (76.35%), Postives = 127/148 (85.81%), Query Frame = 1
Query: 64 QKPLKADVIVYGATPGGFCAAIAAAREGAEVILLEPTDHIGGLNTGGLSFSDSNQTVRSTVMGLFDEWHTRIEKDYADRGITLPYKVSVKDQSKWTYEPHVAMRVTRQMLDEAGVKVLPEQRLQSVQKAGTQIKELVTNRGRFAAQVF 507
Q ++DV+VYGATPGGFCAAIAAAREGA V+LLEPTDHIGG+NTGGLSFSDSNQTVR+TVMGLFDEWH+R+EKDY RGI LPYKVSVKDQSKWTYEP VAMR+T+QMLDEAGVKVLPE L++V K G I L T +G F A+ F
Sbjct: 16 QAATESDVLVYGATPGGFCAAIAAAREGASVVLLEPTDHIGGVNTGGLSFSDSNQTVRNTVMGLFDEWHSRVEKDYVQRGIELPYKVSVKDQSKWTYEPSVAMRITKQMLDEAGVKVLPEHELKTVLKDGPHITGLTTTQGEFTAKTF 163 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126684.5375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126684.5375.1 >prot_M-pyrifera_M_contig126684.5375.1 ID=prot_M-pyrifera_M_contig126684.5375.1|Name=mRNA_M-pyrifera_M_contig126684.5375.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp SLLLAALFLLQSPLRAAQTEQQKPLKADVIVYGATPGGFCAAIAAAREGAback to top mRNA from alignment at M-pyrifera_M_contig126684:3..509+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126684.5375.1 ID=mRNA_M-pyrifera_M_contig126684.5375.1|Name=mRNA_M-pyrifera_M_contig126684.5375.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126684:3..509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126684:3..509+ >mRNA_M-pyrifera_M_contig126684.5375.1 ID=mRNA_M-pyrifera_M_contig126684.5375.1|Name=mRNA_M-pyrifera_M_contig126684.5375.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126684:3..509+ (Macrocystis pyrifera P11B4 male)back to top |