prot_M-pyrifera_M_contig126672.5372.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126672.5372.1
Unique Nameprot_M-pyrifera_M_contig126672.5372.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
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BLAST of mRNA_M-pyrifera_M_contig126672.5372.1 vs. uniprot
Match: A0A2E1VS69_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VS69_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-12
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:   25 SSSAVAQSGPPQDAVNELCPIGAEPIDDETFVVYEGHRIGFCCGGCDSKFLA 76
            +S A+AQS     A+N  CPIG E ID ETFV Y+GH IGFCC GCD+KFLA
Sbjct:   14 ASPALAQS----KAINLNCPIGKEAIDQETFVEYQGHTIGFCCAGCDTKFLA 61
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BLAST of mRNA_M-pyrifera_M_contig126672.5372.1 vs. uniprot
Match: A0A2V8STH8_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8STH8_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 2.080e-5
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 0 
Query:   38 AVNELCPIGAEPIDDETFVVYEGHRIGFCCGGCDSKF 74
            AVNE+CP+ AEPID    V +EG ++ FCC  C  K+
Sbjct:   88 AVNEVCPVSAEPIDKTKSVEFEGRKVYFCCDHCVEKY 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126672.5372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E1VS69_9BACT3.040e-1263.46Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2V8STH8_9BACT2.080e-551.35Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..76
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.937
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126672contigM-pyrifera_M_contig126672:153..380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126672.5372.1mRNA_M-pyrifera_M_contig126672.5372.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126672 153..380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126672.5372.1 ID=prot_M-pyrifera_M_contig126672.5372.1|Name=mRNA_M-pyrifera_M_contig126672.5372.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
MKNLILSLLLLFLPVLATAAALSPSSSAVAQSGPPQDAVNELCPIGAEPI
DDETFVVYEGHRIGFCCGGCDSKFLA
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