mRNA_M-pyrifera_M_contig126664.5369.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: E4PF78_MARAH (Amino acid ABC transporter, permease protein n=28 Tax=Marinobacter TaxID=2742 RepID=E4PF78_MARAH) HSP 1 Score: 328 bits (842), Expect = 6.830e-111 Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRS+MPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct: 105 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 273
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A1W6K8K6_9GAMM (Inner membrane amino-acid ABC transporter permease protein YhdY n=10 Tax=Bacteria TaxID=2 RepID=A0A1W6K8K6_9GAMM) HSP 1 Score: 313 bits (803), Expect = 5.510e-105 Identity = 157/169 (92.90%), Postives = 163/169 (96.45%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
+SF PQFIERFPGRKWLGLFG+ GLPIVGYFLIPGG FGLEEVQSSKWGGLMLTLILAYIGIIASLPIG LLALGRRSEMPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAA ALGLGYW+KMG
Sbjct: 104 LSFAPQFIERFPGRKWLGLFGLTGLPIVGYFLIPGGVFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWKKMG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A1D9GI56_9GAMM (Amino acid ABC transporter permease n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GI56_9GAMM) HSP 1 Score: 311 bits (798), Expect = 3.160e-104 Identity = 150/169 (88.76%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
V+FVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGG+FGLEEV+S+KWGGLMLTLILAYIGI+ASLPIG++LALGRRSEMP+IRG+CV+FIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct: 104 VAFVPQFIENFPGRKWLGIFGMTGLPVIGYFLIPGGTFGLEEVESTKWGGLMLTLILAYIGILASLPIGVVLALGRRSEMPMIRGLCVIFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A5B0VLA4_9GAMM (Amino acid ABC transporter permease n=1 Tax=Marinobacter salinexigens TaxID=2919747 RepID=A0A5B0VLA4_9GAMM) HSP 1 Score: 311 bits (796), Expect = 6.350e-104 Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
V+FVPQFIERFPGRKWLGLFG+ GLP+ GY LIPGG FGL EV+S+KWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAA ALGLGYWRKMG
Sbjct: 104 VAFVPQFIERFPGRKWLGLFGVVGLPVAGYILIPGGPFGLSEVESTKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGLNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWRKMG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI001EF07125 (amino acid ABC transporter permease n=1 Tax=Marinobacter pelagius TaxID=379482 RepID=UPI001EF07125) HSP 1 Score: 311 bits (796), Expect = 6.350e-104 Identity = 153/169 (90.53%), Postives = 164/169 (97.04%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
V+FVPQFIERFPGRKWLGLFGI GLP++GYFLIPGG FGLE V+S+KWGGLMLTLILAYIGI+ASLPIGILLALGRRS+MPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+KMG
Sbjct: 104 VAFVPQFIERFPGRKWLGLFGITGLPVIGYFLIPGGLFGLETVESTKWGGLMLTLILAYIGILASLPIGILLALGRRSDMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLLRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKMG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI001CBD193D (amino acid ABC transporter permease n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001CBD193D) HSP 1 Score: 309 bits (792), Expect = 2.570e-103 Identity = 152/169 (89.94%), Postives = 164/169 (97.04%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
V+FVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGGSFGLEEV S+KWGGLMLTLILAYIGI+ASLPIG LLALGRRS+MPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEGVNFEKL+RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+KMG
Sbjct: 104 VAFVPQFIEGFPGRKWLGIFGMTGLPLIGYFLIPGGSFGLEEVPSTKWGGLMLTLILAYIGILASLPIGTLLALGRRSDMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGVNFEKLSRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKMG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A2V3ZK47_9GAMM (Amino acid ABC transporter permease n=7 Tax=Marinobacter TaxID=2742 RepID=A0A2V3ZK47_9GAMM) HSP 1 Score: 308 bits (788), Expect = 1.040e-102 Identity = 151/169 (89.35%), Postives = 163/169 (96.45%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
+SFVPQFIERFPGRKW GLFG+ GLP+VGYFL+PGG+FGLE V+SSKWGGLMLTLILAYIGI+ASLPIGI+LALGRRSEMPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLP+G+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct: 104 LSFVPQFIERFPGRKWFGLFGLTGLPVVGYFLVPGGNFGLEVVESSKWGGLMLTLILAYIGILASLPIGIVLALGRRSEMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPDGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A0J7JAB6_9GAMM (Amino acid ABC transporter membrane protein 2, PAAT family n=3 Tax=Marinobacter TaxID=2742 RepID=A0A0J7JAB6_9GAMM) HSP 1 Score: 307 bits (786), Expect = 2.090e-102 Identity = 150/169 (88.76%), Postives = 162/169 (95.86%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
+SFVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGGSFGLE V S+KWGGLMLTLI+AYIGIIASLPIGILLALGRRSEMPIIRG+C+VFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct: 104 LSFVPQFIENFPGRKWLGIFGMTGLPVIGYFLIPGGSFGLEAVDSAKWGGLMLTLIIAYIGIIASLPIGILLALGRRSEMPIIRGLCIVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLLRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI0012482005 (amino acid ABC transporter permease n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI0012482005) HSP 1 Score: 306 bits (784), Expect = 4.210e-102 Identity = 151/169 (89.35%), Postives = 162/169 (95.86%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
VSF+PQFIERFPGRKW G+FG+ GLP++G FL+PGGSFGLE VQSSKWGGLMLTLILAYIGI+ASLPIGI+LALGRRSEMPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct: 104 VSFLPQFIERFPGRKWFGIFGLTGLPLIGIFLVPGGSFGLEIVQSSKWGGLMLTLILAYIGILASLPIGIVLALGRRSEMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: W5YJX5_9GAMM (Amino acid ABC transporter permease n=7 Tax=Marinobacter TaxID=2742 RepID=W5YJX5_9GAMM) HSP 1 Score: 305 bits (780), Expect = 1.700e-101 Identity = 150/169 (88.76%), Postives = 162/169 (95.86%), Query Frame = 1
Query: 1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 507
V+FVPQFIERFP RKW G+FG+ GLP++GYFLIPGG+FGLE V+S+KWGGLMLTLILAYIGI+ASLPIGILLALGRRSEMPIIRGI +VFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct: 104 VAFVPQFIERFPARKWFGIFGMTGLPLIGYFLIPGGTFGLEAVESTKWGGLMLTLILAYIGILASLPIGILLALGRRSEMPIIRGISIVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 272 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126664.5369.1 >prot_M-pyrifera_M_contig126664.5369.1 ID=prot_M-pyrifera_M_contig126664.5369.1|Name=mRNA_M-pyrifera_M_contig126664.5369.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGback to top mRNA from alignment at M-pyrifera_M_contig126664:2..508- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126664.5369.1 ID=mRNA_M-pyrifera_M_contig126664.5369.1|Name=mRNA_M-pyrifera_M_contig126664.5369.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126664:2..508- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126664:2..508- >mRNA_M-pyrifera_M_contig126664.5369.1 ID=mRNA_M-pyrifera_M_contig126664.5369.1|Name=mRNA_M-pyrifera_M_contig126664.5369.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126664:2..508- (Macrocystis pyrifera P11B4 male)back to top |