mRNA_M-pyrifera_M_contig126619.5360.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: D2VF35_NAEGR (GTP binding protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VF35_NAEGR) HSP 1 Score: 152 bits (383), Expect = 4.910e-40 Identity = 79/154 (51.30%), Postives = 103/154 (66.88%), Query Frame = 1
Query: 10 RLSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGN-HELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVT-DSVLAARIPNCKG 465
+ SKPNILL+G +G+GKSSLVNAVFGKS A G G+PVT+ T+YA E VV+YD+RG+EHG + F+ +T F K+ DL H+HVVWYVLD++ +RFQ FEAE CR I I F+LNK D Q+R + D++ +PNC G
Sbjct: 186 KTSKPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPVTQQYTKYAGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRGEKDLAKHVHVVWYVLDLTQARFQPFEAEFCRDELKGIPIIFVLNKADAVKN-QIRDIMIDTIANFNLPNCIG 338
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: D2VEP0_NAEGR (G domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEP0_NAEGR) HSP 1 Score: 149 bits (377), Expect = 7.410e-40 Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 19 KPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
KPNIL+ G TGAGKSSLVNAVFG+ A G+G PVT+H +Y P ++ VV+YD++GLE +HE FI+ET F + PD+T HIHVVWYV++ + RF+ FEAE+ R +F+ + F+LNK D + Q++++ + ++ + KG
Sbjct: 60 KPNILVAGITGAGKSSLVNAVFGEELARAGAGMPVTQHFQKYEPSDKPVVIYDSKGLEWNSHEEFIKETGKFFMQLRQSPDVTNHIHVVWYVVNTARGRFENFEAEVVREVFSPTPVIFVLNKSDLADTTQLKAIKKVIEDEKLEHNKG 208
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: A0A6A5C5G3_NAEFO (G domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C5G3_NAEFO) HSP 1 Score: 149 bits (375), Expect = 1.750e-39 Identity = 70/149 (46.98%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 19 KPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
KPNIL+ G TGAGKSSLVNAVFG+ A G+G PVT+H +Y P ++ VV+YD++GLE +HE FI+ET F E PD+ HIHVVWYV++ + RF+ FEAE+ R +FA + F+LNK D + + Q++++ + ++ + +G
Sbjct: 61 KPNILVAGITGAGKSSLVNAVFGEELARAGAGMPVTQHFQKYEPNDKPVVIYDSKGLEWNSHEEFIKETGKFFMELRQSPDVANHIHVVWYVVNTARGRFENFEAEVVREVFAPTPVIFVLNKSDLADSIQLKAIKKVIEDEKLEHNRG 209
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: A0A6B2L5G6_9EUKA (G domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5G6_9EUKA) HSP 1 Score: 144 bits (362), Expect = 2.260e-38 Identity = 67/157 (42.68%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 1 LKARLSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSG--PDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
+ +RL KPN+L+ G TGAGKSSLVN++FG + A TG+G P+T+H T+Y E+ VV+YD++GLEHG ++ FI+ T F + G P+L IHV+WY+++ +HSR++ FE ++CR + + + F+LNK D S+ + + +PN KG
Sbjct: 19 VSSRLQKPNVLITGITGAGKSSLVNSIFGNNIAETGTGVPLTQHFTKYESEDMRVVIYDSKGLEHGEYDNFIQNTNQFFNSLSPGAVPELD-SIHVIWYIVNSAHSRWEPFEEKICREILNKAPLMFVLNKADLSTKKDKEGIKKIIRNLHLPNFKG 174
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: A0A6B2L5C1_9EUKA (G domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5C1_9EUKA) HSP 1 Score: 142 bits (357), Expect = 1.260e-37 Identity = 69/152 (45.39%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 13 LSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSGP-DLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
L KPN+L+ G TGAGKSSL+NA+FGK+ A TG+G P+T+H T+Y ++ VV+YD++GLEHG E F+ T F + G T IHVVWY+++ +HSR++ FE +CR+L + F+LNK D SS + + + R+P+CKG
Sbjct: 7 LLKPNVLITGITGAGKSSLINAIFGKNVAETGTGVPLTQHFTKYESDDMRVVIYDSKGLEHGEFEDFMNTTDHFFESHKPGTVSETDTIHVVWYIVNSAHSRWEPFEEVICRKLLNRAPLMFVLNKADISSPRDRKGMKKLIHDMRLPHCKG 158
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: A0A6A5C446_NAEFO (G domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C446_NAEFO) HSP 1 Score: 142 bits (359), Expect = 1.290e-36 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 19 KPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGN-HELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
KPNILL+G +G+GKSSLVNAVFGKS A G G+P+T+ T+Y E VV+YD+RG+EHG + F+ +T F K+ L+ H+HVVWYV+D++ +RFQ FEAE C+ I I F+LNK D + +++ +PNC G
Sbjct: 189 KPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPITQRYTKYTGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRQEESLSKHVHVVWYVIDLTQARFQPFEAEFCKEELKGIPIIFVLNKADAVKDDIRDIMIETIAKFNLPNCIG 338
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: UPI001CFEBF70 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEBF70) HSP 1 Score: 142 bits (358), Expect = 1.750e-36 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 19 KPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGN-HELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
KPNILL+G +G+GKSSLVNAVFGKS A G G+P+T+ T+Y E VV+YD+RG+EHG + F+ +T F K+ L H+HVVWYV+D++ +RFQ FEAE C+ I I F+LNK D + +++ +PNC G
Sbjct: 203 KPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPITQRYTKYTGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRQEESLAKHVHVVWYVIDLTQARFQPFEAEFCKEELKGIPIIFVLNKADAVKDNVRDIMIETIANFNLPNCIG 352
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: L8GY39_ACACA (Miro family protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GY39_ACACA) HSP 1 Score: 134 bits (338), Expect = 2.110e-36 Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 1 LKARLSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCK 462
L L KPNILL+GKTGAGKSSL+NAVFG FA TGSG+PVT+HL +Y + VV+YDT GLEHG+ + F+ + F+ +N D +FEA LC +F ++ IF ILNK DT+S Q R V + +L+ ++ NCK
Sbjct: 45 LSHNLRKPNILLVGKTGAGKSSLINAVFGARFAETGSGQPVTQHLQKY--DSGQVVIYDTVGLEHGSSDQFVNDVKQFIATSNKSSD--------------------SFEANLCNTIFGDLPIFIILNKADTASPEQARIVKNQILSLKLSNCK 176
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: L8GJC7_ACACA (G domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJC7_ACACA) HSP 1 Score: 137 bits (346), Expect = 4.570e-36 Identity = 67/153 (43.79%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 7 ARLSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNHELFIEETVAFLKETNSGPDLTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
A + KPN+L+ G TGAGKSSLVNA+FG+ A G G+P+T+H +RYAP++ VVVYD++GLE G HE F+ + FL++ S P+L HIH++WYV++ +R + FEA L + +FA D +SA Q+ + +S+ NC+G
Sbjct: 34 ANVKKPNVLVSGVTGAGKSSLVNAIFGEGMAKVGVGKPLTQHFSRYAPDDMPVVVYDSKGLEQGFHEEFVADAKEFLEKIKSQPELGDHIHIIWYVINAGSARIEPFEAFLIKEIFAP---------ADIASAEQLNELEESIKQYEFTNCRG 177
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Match: A0A7S4I3C9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3C9_9EUKA) HSP 1 Score: 127 bits (318), Expect = 2.910e-31 Identity = 61/155 (39.35%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 13 LSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPEEESVVVYDTRGLEHGNH-ELFIEETVAFLKETNSGPD---LTLHIHVVWYVLDMSHSRFQAFEAELCRRLFAEIAIFFILNKVDTSSAAQVRSVTDSVLAARIPNCKG 465
L +P +L+ G GAGKSS++N +FG A G+G PVT+H R+ PEE+ +++YD++GLE G + FI+ T ++ + N G + + I VVWY+++ + +RFQ FE ++C+ LF E+ I FILNK D S+ Q +++ + + NC G
Sbjct: 62 LKRPKVLIAGVAGAGKSSIINTIFGSEMAKEGAGRPVTQHFQRFEPEEKPIILYDSKGLEVGMQLDEFIQSTRSYFTQLNDGEEERCMEQQIDVVWYIVNSAAARFQDFEEQICKELFKELPIIFILNKSDISTKEQRQALRKVIKEMNLNNCIG 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126619.5360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126619.5360.1 >prot_M-pyrifera_M_contig126619.5360.1 ID=prot_M-pyrifera_M_contig126619.5360.1|Name=mRNA_M-pyrifera_M_contig126619.5360.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp LKARLSKPNILLIGKTGAGKSSLVNAVFGKSFAATGSGEPVTKHLTRYAPback to top mRNA from alignment at M-pyrifera_M_contig126619:43..507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126619.5360.1 ID=mRNA_M-pyrifera_M_contig126619.5360.1|Name=mRNA_M-pyrifera_M_contig126619.5360.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig126619:43..507- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126619:43..507- >mRNA_M-pyrifera_M_contig126619.5360.1 ID=mRNA_M-pyrifera_M_contig126619.5360.1|Name=mRNA_M-pyrifera_M_contig126619.5360.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig126619:43..507- (Macrocystis pyrifera P11B4 male)back to top |