prot_M-pyrifera_M_contig1266.5354.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1266.5354.1
Unique Nameprot_M-pyrifera_M_contig1266.5354.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length207
Homology
BLAST of mRNA_M-pyrifera_M_contig1266.5354.1 vs. uniprot
Match: D8LTW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW7_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.670e-21
Identity = 74/172 (43.02%), Postives = 92/172 (53.49%), Query Frame = 0
Query:   10 VSPDEKFEEIVGVSDTFVPAANVWVGEYPYLEKVVMERLLASRDSRRRRRGGTEDAGYEEDEQEDLRPMAYRDARAQARDWEDSKQASRPASG----------SSPRSNVSEYDXXXXXXXXXG---------------DPQYEGWGSSGFSSAQSR--VNVGSDGESGRGQ 154
            VSPDE+FEEI+GVSDTF+PAANVWVGEYPYL+KVVM RLLASRD +R           + DE E+L P+ YRD+  Q R  ED      P+ G          S+P ++  E +                         +P YEG GSSGFS A+ R  V  G    +GRG+
Sbjct:  158 VSPDERFEEILGVSDTFIPAANVWVGEYPYLDKVVMRRLLASRDLKR---XXXXXXXXDADEDEELDPITYRDSWTQTRPLEDD-----PSRGXXXXXXETGFSAPPAHAGEGEAGLPNGGAGTVLPDFGAYFGESEDEEPYYEGVGSSGFSGAERRRAVAAGERSAAGRGR 321          
BLAST of mRNA_M-pyrifera_M_contig1266.5354.1 vs. uniprot
Match: A0A6H5KJB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB0_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.780e-18
Identity = 81/217 (37.33%), Postives = 96/217 (44.24%), Query Frame = 0
Query:   10 VSPDEKFEEIVGVSDTFVPAANVWVGEYPYLEKVVMERLLASRDSRRRRRGGTEDAGYEEDEQE---------------------------DLRPMAYRDARAQARDWED-------------SKQASRPASGSSPRSNVSEYDXXXXXXXXXGD-----PQYEGWGSSGFSSAQSR--VNVGSDGESGRGQQW-----------ERVSGIPKPRRR 168
            VSPDE+FEEI+GVSDTF+PAANVWVGEYPYL+KVVM RLLASRD +R                                            +L P+AYRD+  Q R  +D             S   +    G+S   N              G+     P YEG GSSGFS A+ R  V  G    +GRG              ERVSG P+PRRR
Sbjct:  154 VSPDERFEEILGVSDTFIPAANVWVGEYPYLDKVVMRRLLASRDLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDPIAYRDSWTQTRPLDDDLARGGRGGGGPSSAPPAHAGEGASGLPNGGTGTVPPDFGAYFGEREYEEPYYEGVGSSGFSGAERRGMVAAGERSAAGRGXXXXXXXXXXXXXXERVSGKPRPRRR 370          
BLAST of mRNA_M-pyrifera_M_contig1266.5354.1 vs. uniprot
Match: K8Z4E0_NANGC (Putative membrane protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4E0_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 2.140e-6
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   11 SPDEKFEEIVGVSDTFVPAANVWVGEYPYLEKVVMERLLASRDSRRRRRGG 61
            SPD  F+E++GVSD FVP    WVGEYPY++KV  +  LASR    RRRGG
Sbjct:  197 SPD--FDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRA---RRRGG 242          
BLAST of mRNA_M-pyrifera_M_contig1266.5354.1 vs. uniprot
Match: K8Z4B4_NANGC (Putative membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z4B4_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 2.300e-6
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   11 SPDEKFEEIVGVSDTFVPAANVWVGEYPYLEKVVMERLLASRDSRRRRRGG 61
            SPD  F+E++GVSD FVP    WVGEYPY++KV  +  LASR    RRRGG
Sbjct:  250 SPD--FDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRA---RRRGG 295          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1266.5354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTW7_ECTSI1.670e-2143.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJB0_9PHAE7.780e-1837.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8Z4E0_NANGC2.140e-658.82Putative membrane protein n=1 Tax=Nannochloropsis ... [more]
K8Z4B4_NANGC2.300e-658.82Putative membrane protein n=3 Tax=Monodopsidaceae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1266contigM-pyrifera_M_contig1266:7849..8778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1266.5354.1mRNA_M-pyrifera_M_contig1266.5354.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1266 7849..8779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1266.5354.1 ID=prot_M-pyrifera_M_contig1266.5354.1|Name=mRNA_M-pyrifera_M_contig1266.5354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
RAVVCAVFQVSPDEKFEEIVGVSDTFVPAANVWVGEYPYLEKVVMERLLA
SRDSRRRRRGGTEDAGYEEDEQEDLRPMAYRDARAQARDWEDSKQASRPA
SGSSPRSNVSEYDYDYDERDEDGDPQYEGWGSSGFSSAQSRVNVGSDGES
GRGQQWERVSGIPKPRRRAAARRFEEDEDSYGDRRMREASRGRSDRREDG
SEWGGGR
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