prot_M-pyrifera_M_contig12656.5349.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12656.5349.1
Unique Nameprot_M-pyrifera_M_contig12656.5349.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length566
Homology
BLAST of mRNA_M-pyrifera_M_contig12656.5349.1 vs. uniprot
Match: D8LE69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE69_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 1.050e-124
Identity = 242/396 (61.11%), Postives = 273/396 (68.94%), Query Frame = 0
Query:    7 RPLFPLEPLVTGVLAASGSASPQP--------LSPYP-QGGMHGGGVDALALDGGTLDVLRRIVGRYSPPRSRLPRGTSPGDGPGLGAGATCAVFRLLCRYGLHVLAAEVTGLNAA--GGEGIETRSADVFMRRRPWISPLERSHCAAQLNLPLTAMVEGIGDDPALVDTSGDPDAMTSALLPAVDSRRLSRIALLLAEQSDRLGLHDDAARLFDLSGHDDRLAAYLN----------GRIQAVSHLDRESPPTDXXXXXXL-AAVKERLRALASAREAAGLTGSVAGKEAGDGGAAAFADLFRRASLLAGVSRLPQARSR--GLQGEALEAAGGGAKWDEIIKDAKPAALVLGXXXXXXXXXXXXXXSSSLRPLALHCAEQWAGRARPECLEVST 378
            RP FPLEPLV GVLAA+ + S            SP     G  GGG     LD GTL VLRRIV RY+PPRSRLPRGT+PGDGPGLGAGATC+ FR+L RYGLHVLAAEV G++++  GGE  ETRS+DVFMRRRPWISPLERSHCAA L LPLTAM+EGIGDDPALVDTS DPDAMTSA+LPAV SR LSR+AL L EQS RLGLH+ AARLFD+SG D RL+ YLN          G +   +    +   T       +  A  ++LRAL +AREA G  G   GK  G+  A A A LFRR SLLAGV R PQA S   GL+G+ALEAAGGGAKWD I+++AKPA    G              SSSLRPLALHCAEQW+GR RPECLEVST
Sbjct:  606 RPFFPLEPLVAGVLAAASAGSSXXXXXXXXXLFSPGSGSDGSDGGGDVERLLDDGTLQVLRRIVARYAPPRSRLPRGTNPGDGPGLGAGATCSAFRVLSRYGLHVLAAEVAGVSSSSSGGEATETRSSDVFMRRRPWISPLERSHCAASLELPLTAMIEGIGDDPALVDTSTDPDAMTSAVLPAVGSR-LSRMALSLGEQSARLGLHEAAARLFDISGEDARLSGYLNXXXXXXTSQSGSLNEAAQAAPDGIETQPEAAAEVEVAAADQLRALTAAREAGG--GRGVGKATGEVSAQA-AGLFRRTSLLAGVVRFPQASSSSGGLKGKALEAAGGGAKWDVIMEEAKPAG---GLSFGGGGRVGEGPPSSSLRPLALHCAEQWSGRVRPECLEVST 994          
BLAST of mRNA_M-pyrifera_M_contig12656.5349.1 vs. uniprot
Match: A0A6H5KK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK27_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.940e-94
Identity = 194/332 (58.43%), Postives = 221/332 (66.57%), Query Frame = 0
Query:    7 RPLFPLEPLVTGVLAASGSAS---PQPLSPYPQG----GMHGGGVDALALDGGTLDVLRR-------IVGRYSPPRSRLPRGTSPGDGPGLGAGATCAVFRLLCRYGLHVLAAEVTGLNAA-GGEGIETRSADVFMRRRPWISPLERSHCAAQLNLPLTAMVEGIGDDPALVDTSGDPDAMTSALLPAVDSR-----------RLSRIALLLAEQSDRLGLHDDAARLFDLSGHDDRLAAYLNGRIQA---VSHLDRESPPTDXXXXXXL--------AAVKERLRALASAREAAGLTGSVAGKEAGDGGAAAFADLFRRASLLAGVSRLPQ 301
            RP FPLEPLV GVLAA+ + S   P PL+ +  G    G  G G     LD  TL VLRR       IV RY+PPRSRLPRGT+PGDGPGLGAGATC+ FR+L RYGLHVLAAEV G++++ GGE +ETR++DVFMRRRPWISPLERSHCAA L LPLTAM+EGIGDDPALVDT  DPDAMTSA+LPAV S            RLSR+AL L EQS RLGLH+ AARLFD+SG D RLA++LN  +      S    E+  T                AA  ++LRAL SAREA G  G   GK  G+  A A A LFRR SLLAGV R PQ
Sbjct:  294 RPFFPLEPLVAGVLAAASAGSSPPPLPLTLFSPGSGTDGSDGAGDAERLLDDSTLHVLRRCRAARVGIVARYAPPRSRLPRGTNPGDGPGLGAGATCSAFRVLSRYGLHVLAAEVAGVSSSSGGEAMETRASDVFMRRRPWISPLERSHCAASLELPLTAMIEGIGDDPALVDTLTDPDAMTSAVLPAVGSSIIRDMCWIGQVRLSRMALSLGEQSARLGLHEAAARLFDISGEDARLASFLNSHVNGHTCPSGSQNEAAQTAPDGVETQPEAAAEVEAAAADQLRALTSAREARG--GRGVGKATGEVSAQA-AGLFRRTSLLAGVVRFPQ 622          
BLAST of mRNA_M-pyrifera_M_contig12656.5349.1 vs. uniprot
Match: A0A6H5K7T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.430e-29
Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = 0
Query:  483 EQPWVAVGGSWQDEDNVCGYWRFSEGADVGHHLEGEQKVEIRDLSKFGSAAVVKGSGVRFEDTTSPVDPGDKGKVAEAVDVCYP 566
            +QPWV VGGSW+DEDNVCGYWRFSEGA V   LE  ++VE++DL+K+GS AV +G G+ FE T+SPVDPGDKGKVAEAVDVC+P
Sbjct:   96 QQPWVPVGGSWKDEDNVCGYWRFSEGAAVVGELEDGKQVEMKDLTKYGSTAVARGQGLTFETTSSPVDPGDKGKVAEAVDVCFP 179          
BLAST of mRNA_M-pyrifera_M_contig12656.5349.1 vs. uniprot
Match: D8LE70_ECTSI (SRS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE70_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.940e-29
Identity = 60/84 (71.43%), Postives = 73/84 (86.90%), Query Frame = 0
Query:  483 EQPWVAVGGSWQDEDNVCGYWRFSEGADVGHHLEGEQKVEIRDLSKFGSAAVVKGSGVRFEDTTSPVDPGDKGKVAEAVDVCYP 566
            +QPWV VGGSW+DEDNVCGYWRFSEGA V   LE  ++VE++DL+K+GSAAV +G G+ F+ T+SPVDPGDKGKVAEAVDVC+P
Sbjct:   80 QQPWVPVGGSWKDEDNVCGYWRFSEGAAVVGGLEDGKQVEMKDLTKYGSAAVARGQGLTFQTTSSPVDPGDKGKVAEAVDVCFP 163          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12656.5349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LE69_ECTSI1.050e-12461.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK27_9PHAE2.940e-9458.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7T4_9PHAE1.430e-2971.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE70_ECTSI1.940e-2971.43SRS domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..566
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.518

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12656contigM-pyrifera_M_contig12656:100..7006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12656.5349.1mRNA_M-pyrifera_M_contig12656.5349.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12656 100..7006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12656.5349.1 ID=prot_M-pyrifera_M_contig12656.5349.1|Name=mRNA_M-pyrifera_M_contig12656.5349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=566bp
MFLRFCRPLFPLEPLVTGVLAASGSASPQPLSPYPQGGMHGGGVDALALD
GGTLDVLRRIVGRYSPPRSRLPRGTSPGDGPGLGAGATCAVFRLLCRYGL
HVLAAEVTGLNAAGGEGIETRSADVFMRRRPWISPLERSHCAAQLNLPLT
AMVEGIGDDPALVDTSGDPDAMTSALLPAVDSRRLSRIALLLAEQSDRLG
LHDDAARLFDLSGHDDRLAAYLNGRIQAVSHLDRESPPTDDEEEEELAAV
KERLRALASAREAAGLTGSVAGKEAGDGGAAAFADLFRRASLLAGVSRLP
QARSRGLQGEALEAAGGGAKWDEIIKDAKPAALVLGGGGGSGGGGDEGPP
SSSLRPLALHCAEQWAGRARPECLEVSTGVGGSIFATALRRPVLPAAAAS
SSPIATGTTTSTDFEALAAAGSGNRSSSSSSVNFGLESPAPAAAGGAVPA
VPAAAAAVAATAAAAAATVSDAAGSLISTEVVEQPWVAVGGSWQDEDNVC
GYWRFSEGADVGHHLEGEQKVEIRDLSKFGSAAVVKGSGVRFEDTTSPVD
PGDKGKVAEAVDVCYP
back to top