mRNA_M-pyrifera_M_contig126457.5331.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A6I6ACE4_9PLAN (CdiI_4 domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACE4_9PLAN) HSP 1 Score: 125 bits (315), Expect = 2.500e-36 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 1
Query: 1 LKNRVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPD 189
LKNRVSYGLDVCFCEFPESL FDEEPFEGVRF IYE+EVIITEAEFEKLLQKLATIQVCRFPD
Sbjct: 33 LKNRVSYGLDVCFCEFPESLEFDEEPFEGVRFCIYEEEVIITEAEFEKLLQKLATIQVCRFPD 95
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A3E0WH86_9GAMM (CdiI_4 domain-containing protein n=1 Tax=Alkalilimnicola ehrlichii TaxID=351052 RepID=A0A3E0WH86_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 5.660e-10 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 13 VSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLL 150
SYG + C+FP+ L DEEPFEGVRFR ++DEV+++E+ FE+ L
Sbjct: 42 TSYGDEYSACDFPDGLEEDEEPFEGVRFRYHDDEVVVSESNFEECL 87
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: UPI001EFCA62D (ribonuclease toxin immunity protein CdiI n=1 Tax=Vibrio sp. Isolate23 TaxID=2908533 RepID=UPI001EFCA62D) HSP 1 Score: 59.7 bits (143), Expect = 5.660e-10 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 LKNRVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLL 150
L +SYG + CEFP++L DEEPFEGVRFR ++DEVI+++ F+ L+
Sbjct: 38 LLEGISYGDEYSSCEFPDNLEDDEEPFEGVRFRFFDDEVIVSDEVFKDLV 87
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A150MHH6_9BACI (CdiI_4 domain-containing protein n=2 Tax=Geobacillus TaxID=129337 RepID=A0A150MHH6_9BACI) HSP 1 Score: 55.1 bits (131), Expect = 4.400e-8 Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 1 LKNRVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPDQ 192
L YG++ C FP L+ D+EPFEGV F ++++EVII F L++ + + FPDQ
Sbjct: 37 LSTGAGYGINAVDCTFPNDLDPDDEPFEGVMFALHDEEVIIDYHTFYYYLEQTCNMYIKNFPDQ 100
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: UPI00105D4CB3 (ribonuclease toxin immunity protein CdiI n=1 Tax=Comamonas sp. JUb58 TaxID=2485114 RepID=UPI00105D4CB3) HSP 1 Score: 54.3 bits (129), Expect = 8.610e-8 Identity = 21/58 (36.21%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 13 VSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFP 186
+ G D CEFP L +++PF+GV+F ++EDEV++++ +F ++L++ I + R P
Sbjct: 37 IGRGFDDAVCEFPGELVSEDQPFKGVKFYLFEDEVVLSKLDFLRVLEEACLIYIARHP 94
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A2D8RDA2_9GAMM (CdiI_4 domain-containing protein n=1 Tax=Hahellaceae bacterium TaxID=2048971 RepID=A0A2D8RDA2_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 2.920e-7 Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 13 VSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLL 150
Y + CEFP L+ D+EPFEGVRFR +DE+++TE F K L
Sbjct: 42 TGYASEYNGCEFPSDLDEDDEPFEGVRFRYDDDEIVVTEEAFRKCL 87
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A8E4SEU3_MYXXA (CdiI_4 domain-containing protein n=3 Tax=Myxococcus TaxID=32 RepID=A0A8E4SEU3_MYXXA) HSP 1 Score: 49.7 bits (117), Expect = 3.710e-6 Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 1
Query: 10 RVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPD 189
RV G+D CEFP L E+ FEGVRF +YED V++ E F+ L + + V P+
Sbjct: 26 RVGAGIDGAQCEFPGGLEPWEQEFEGVRFSLYEDVVVVEEPVFQMFLLEACRMYVKDHPE 85
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: UPI0012FD64C9 (ribonuclease toxin immunity protein CdiI n=1 Tax=Delftia acidovorans TaxID=80866 RepID=UPI0012FD64C9) HSP 1 Score: 49.7 bits (117), Expect = 4.630e-6 Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 1
Query: 7 NRVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPD 189
NR+ G + CEFPE + ++ F+GVRF I+ +EVII+ F +L ++ +I + + D
Sbjct: 35 NRIGAGFNDATCEFPEEVESGDDYFDGVRFSIFNEEVIISNEVFFDILSQVCSIYISKNKD 95
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: A0A3A8SU93_9DELT (CdiI_4 domain-containing protein n=3 Tax=unclassified Corallococcus TaxID=2685029 RepID=A0A3A8SU93_9DELT) HSP 1 Score: 49.3 bits (116), Expect = 7.070e-6 Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 1 LKNRVSYGLD-VCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPD 189
L N + YG + + CEFP SL+ EE F+GVRF IYE+EVI+ + F + A V +P+
Sbjct: 35 LLNGIGYGFEGILSCEFPGSLDPWEERFDGVRFSIYEEEVIVDYSVFVRFALTWAQAHVKAWPE 98
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Match: UPI001127846A (ribonuclease toxin immunity protein CdiI n=1 Tax=Myxococcus xanthus TaxID=34 RepID=UPI001127846A) HSP 1 Score: 48.5 bits (114), Expect = 2.330e-5 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 1
Query: 10 RVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLQKLATIQVCRFPD 189
RV +D CEFP L+ E+ FEGVRF +YED V++ E F+ L + + V P+
Sbjct: 71 RVGAEIDGAHCEFPGDLDPWEQKFEGVRFSLYEDVVVVVEPVFQMFLLEACRMHVKDHPE 130 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126457.5331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126457.5331.1 >prot_M-pyrifera_M_contig126457.5331.1 ID=prot_M-pyrifera_M_contig126457.5331.1|Name=mRNA_M-pyrifera_M_contig126457.5331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp LKNRVSYGLDVCFCEFPESLNFDEEPFEGVRFRIYEDEVIITEAEFEKLLback to top mRNA from alignment at M-pyrifera_M_contig126457:314..505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126457.5331.1 ID=mRNA_M-pyrifera_M_contig126457.5331.1|Name=mRNA_M-pyrifera_M_contig126457.5331.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig126457:314..505- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126457:314..505- >mRNA_M-pyrifera_M_contig126457.5331.1 ID=mRNA_M-pyrifera_M_contig126457.5331.1|Name=mRNA_M-pyrifera_M_contig126457.5331.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig126457:314..505- (Macrocystis pyrifera P11B4 male)back to top |