mRNA_M-pyrifera_M_contig126194.5284.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126194.5284.1
Unique NamemRNA_M-pyrifera_M_contig126194.5284.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A7S4HIR5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HIR5_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 4.150e-23
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 1 
Query:   19 PASTFEARALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            P++ F ARALYDY G  +YEL F AGD+IT+  ED +TGWWTGELNG VGPFPGNYV+R+
Sbjct:  345 PSNGFRARALYDYSGTHDYELSFAAGDIITVTQEDAATGWWTGELNGVVGPFPGNYVERI 404
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A058ZDZ4_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZDZ4_FONAL)

HSP 1 Score: 77.0 bits (188), Expect = 6.670e-15
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 1 
Query:   31 FEARALYDYVGEQEYELGFKAGDVITIHSED-NSTGWWTGELNGKVGPFPGNYVQRM 198
            F+ARALYDY G  E EL    G +I + S D + +GWW GELNGKVG FPGNY++R+
Sbjct:  690 FQARALYDYSGGSEQELSLTEGSIINVISTDQDGSGWWMGELNGKVGEFPGNYIERI 746
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A1D2VKB7_9ASCO (BAR-domain-containing protein n=1 Tax=Ascoidea rubescens DSM 1968 TaxID=1344418 RepID=A0A1D2VKB7_9ASCO)

HSP 1 Score: 75.1 bits (183), Expect = 2.950e-14
Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 1 
Query:    1 GYDAAAPASTFEARALYDYVGEQEYELGFKAGDVITI-HSEDNSTGWWTGELNGKVGPFPGNYVQ 192
            G  AAAP +     ALYDY  + E +L F AG VI I     +S GWWTG+LNG+VG FPGNYVQ
Sbjct:  369 GRPAAAPRAVETCTALYDYAAQAEGDLSFNAGSVIEIVQRTSDSNGWWTGQLNGRVGVFPGNYVQ 433
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A8J4PZU9_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZU9_9MYCE)

HSP 1 Score: 73.9 bits (180), Expect = 7.890e-14
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:   16 APASTFEARALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            A A  ++ +ALYDY GE E +L F AGD+IT+  + +  GWW GELNG  G FP N+++ +
Sbjct:  423 ASAGGYQVKALYDYPGENEGDLAFNAGDIITVLDQSDPNGWWQGELNGVTGFFPCNFIENL 483
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A3N4IBB9_ASCIM (DUF500-domain-containing protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IBB9_ASCIM)

HSP 1 Score: 72.8 bits (177), Expect = 1.860e-13
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:   34 EARALYDYVGEQEYELGFKAGDVITIHSEDNSTG-WWTGELNGKVGPFPGNYVQ 192
            +A ALY YV +Q+ +LGFK GD+ITI  + NS   WWTGELNGK G FP NYVQ
Sbjct:  349 QAVALYSYVPDQDGDLGFKKGDIITIIEKTNSANDWWTGELNGKRGIFPSNYVQ 402
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A137PIB7_CONC2 (Class E vacuolar protein-sorting machinery protein HSE1 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PIB7_CONC2)

HSP 1 Score: 72.4 bits (176), Expect = 2.750e-13
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1 
Query:   10 AAAPASTFEARALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            A  PA+ F+ RALYD+   +  ELGF+ GD++ +  +     WW GELNG+VG FP NYV+R+
Sbjct:  206 ATKPAAKFQVRALYDFTPSESQELGFRKGDIVKV-LDSQYPNWWKGELNGQVGLFPNNYVERI 267
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A4P7NK47_MAGOR (Uncharacterized protein n=7 Tax=Pyricularia TaxID=48558 RepID=A0A4P7NK47_MAGOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.730e-13
Identity = 37/61 (60.66%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:   13 AAPASTFEARALYDYVGEQEYELGFKAGDVITIHSE-DNSTGWWTGELNGKVGPFPGNYVQ 192
            AAPA+     ALY+Y   QE +L F AGDVI I S   N+  WWTG LNGKVG FPGNYVQ
Sbjct:  398 AAPAAE-TVTALYEYAATQEGDLSFHAGDVIEIVSRTQNANEWWTGRLNGKVGQFPGNYVQ 457
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A218UCI4_9PASE (Unconventional myosin-If n=1 Tax=Lonchura striata domestica TaxID=299123 RepID=A0A218UCI4_9PASE)

HSP 1 Score: 71.6 bits (174), Expect = 5.300e-13
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:   40 RALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            RALY Y+G+   EL F  GDVI I  ED S GWW G+L+GK G FPGNYVQR+
Sbjct: 1031 RALYQYIGQDVDELSFNVGDVIDILMEDAS-GWWKGQLHGKEGLFPGNYVQRI 1082
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: UPI000F4FB556 (growth factor receptor-bound protein 2-like n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4FB556)

HSP 1 Score: 70.1 bits (170), Expect = 9.460e-13
Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1 
Query:   16 APASTFEARALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            AP  T + +ALYD++ E+E ELGF AGDVI +    +++ WW G L G VG FP NY  +M
Sbjct:  221 APRPTAQVQALYDFIAEEEDELGFNAGDVIEVLDRSDAS-WWKGRLRGNVGLFPANYTSQM 280
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BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Match: A0A7L0YEU8_9PASE (MYO1F protein (Fragment) n=1 Tax=Ploceus nigricollis TaxID=441696 RepID=A0A7L0YEU8_9PASE)

HSP 1 Score: 70.5 bits (171), Expect = 1.350e-12
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 
Query:   40 RALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGELNGKVGPFPGNYVQRM 198
            RALY Y+G+   EL F  GDVI I  ED S GWW G+L+GK G FPGNYVQ++
Sbjct: 1044 RALYQYIGQDVDELSFNVGDVIDILMEDAS-GWWKGQLHGKEGLFPGNYVQKI 1095
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126194.5284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HIR5_9EUKA4.150e-2368.33Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A058ZDZ4_FONAL6.670e-1557.89Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
A0A1D2VKB7_9ASCO2.950e-1455.38BAR-domain-containing protein n=1 Tax=Ascoidea rub... [more]
A0A8J4PZU9_9MYCE7.890e-1447.54Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A3N4IBB9_ASCIM1.860e-1362.96DUF500-domain-containing protein n=1 Tax=Ascobolus... [more]
A0A137PIB7_CONC22.750e-1347.62Class E vacuolar protein-sorting machinery protein... [more]
A0A4P7NK47_MAGOR3.730e-1360.66Uncharacterized protein n=7 Tax=Pyricularia TaxID=... [more]
A0A218UCI4_9PASE5.300e-1362.26Unconventional myosin-If n=1 Tax=Lonchura striata ... [more]
UPI000F4FB5569.460e-1349.18growth factor receptor-bound protein 2-like n=1 Ta... [more]
A0A7L0YEU8_9PASE1.350e-1260.38MYO1F protein (Fragment) n=1 Tax=Ploceus nigricoll... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126194contigM-pyrifera_M_contig126194:99..299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score77.4
Seed ortholog evalue2.8e-12
Seed eggNOG ortholog691883.XP_009492321.1
Preferred nameBZZ1
KEGG koko:K20121
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005886,GO:0005933,GO:0005935,GO:0005937,GO:0005938,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0008047,GO:0008064,GO:0008150,GO:0008289,GO:0009628,GO:0009651,GO:0009987,GO:0010638,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0019992,GO:0030029,GO:0030036,GO:0030234,GO:0030427,GO:0030479,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0031334,GO:0032271,GO:0032273,GO:0032535,GO:0032956,GO:0032970,GO:0033043,GO:0042995,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043332,GO:0044087,GO:0044089,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044463,GO:0044464,GO:0045010,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051286,GO:0051493,GO:0051495,GO:0061645,GO:0065007,GO:0065008,GO:0065009,GO:0071840,GO:0071944,GO:0072583,GO:0090066,GO:0097435,GO:0098657,GO:0098772,GO:0099568,GO:0110053,GO:0120025,GO:0120038,GO:1902903,GO:1902905
EggNOG free text desc.negative regulation of protein localization to cell-cell adherens junction
EggNOG OGs38EK2@33154,KOG3565@1,KOG3565@2759
COG Functional cat.Z
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size201
Cds size201
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815776.8495815-CDS-M-pyrifera_M_contig126194:98..2991622815776.8495815-CDS-M-pyrifera_M_contig126194:98..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126194 99..299 -
1692277564.409528-CDS-M-pyrifera_M_contig126194:98..2991692277564.409528-CDS-M-pyrifera_M_contig126194:98..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126194 99..299 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126194.5284.1prot_M-pyrifera_M_contig126194.5284.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126194 99..299 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126194.5284.1

>prot_M-pyrifera_M_contig126194.5284.1 ID=prot_M-pyrifera_M_contig126194.5284.1|Name=mRNA_M-pyrifera_M_contig126194.5284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
GYDAAAPASTFEARALYDYVGEQEYELGFKAGDVITIHSEDNSTGWWTGE
LNGKVGPFPGNYVQRM*
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mRNA from alignment at M-pyrifera_M_contig126194:99..299-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126194.5284.1 ID=mRNA_M-pyrifera_M_contig126194.5284.1|Name=mRNA_M-pyrifera_M_contig126194.5284.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig126194:99..299- (Macrocystis pyrifera P11B4 male)
GGCTACGACGCGGCCGCGCCCGCCAGCACCTTCGAGGCGCGCGCACTCTA
CGACTACGTGGGAGAGCAGGAGTACGAGCTCGGCTTCAAGGCGGGCGACG
TCATCACCATCCACTCAGAAGACAACTCCACCGGCTGGTGGACGGGCGAG
CTCAACGGCAAGGTCGGCCCCTTCCCGGGCAACTACGTCCAGAGGATGTA
G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126194:99..299-

>mRNA_M-pyrifera_M_contig126194.5284.1 ID=mRNA_M-pyrifera_M_contig126194.5284.1|Name=mRNA_M-pyrifera_M_contig126194.5284.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig126194:99..299- (Macrocystis pyrifera P11B4 male)
GGCTACGACGCGGCCGCGCCCGCCAGCACCTTCGAGGCGCGCGCACTCTA
CGACTACGTGGGAGAGCAGGAGTACGAGCTCGGCTTCAAGGCGGGCGACG
TCATCACCATCCACTCAGAAGACAACTCCACCGGCTGGTGGACGGGCGAG
CTCAACGGCAAGGTCGGCCCCTTCCCGGGCAACTACGTCCAGAGGATGTA
GGGCTACGACGCGGCCGCGCCCGCCAGCACCTTCGAGGCGCGCGCACTCT
ACGACTACGTGGGAGAGCAGGAGTACGAGCTCGGCTTCAAGGCGGGCGAC
GTCATCACCATCCACTCAGAAGACAACTCCACCGGCTGGTGGACGGGCGA
GCTCAACGGCAAGGTCGGCCCCTTCCCGGGCAACTACGTCCAGAGGATGT
AG
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