prot_M-pyrifera_M_contig126165.5276.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126165.5276.1
Unique Nameprot_M-pyrifera_M_contig126165.5276.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A349B8C3_9ACTN (Penicillin-binding protein 2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B8C3_9ACTN)

HSP 1 Score: 145 bits (365), Expect = 2.730e-37
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSL-LDRSDTPLLDRSIKGLYPAGSTFKHVTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYALG 168
            IDI+ Q  +E +LA  LE AR R       P+  +AGS+V  D R+G V A+A++P +DP+DFV G+S+++++ L  D +D P+L+R+I+G+Y  GST+K  TG AA+V G R  D  + D+G FTI  C      GC FRNAG   YG V+M  A+ VSSD YFY++G
Sbjct:  254 IDIETQALSEDLLAQALEDARNRRVSGDNLPNRGNAGSVVVTDPRNGEVLAMASYPVFDPADFVNGISSTRWEFLNSDEADKPILNRAIQGVYAPGSTYKLFTGLAAMVHGLRTPDQPFLDQGTFTIEDCRGP---GCTFRNAGSKAYGTVDMRRAMTVSSDAYFYSIG 419          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A2N5JW78_9ACTN (Penicillin-binding protein 2 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JW78_9ACTN)

HSP 1 Score: 140 bits (352), Expect = 1.330e-35
Identity = 80/169 (47.34%), Postives = 105/169 (62.13%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSDT-PLLDRSIKGLYPAGSTFKHVTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYALG 168
            +D+D+Q  AE  LA  LE +R+R   +  K  VA AG+ V +D RDG+V A+A+FP YDPS FV G+S   +++L D+++  PL +R+I+G Y  GSTFK +T  AAL  GA   D    DEG F + SC       C FRNAG   YG VN+  AL VSSD +FY LG
Sbjct:  238 LDLDVQRLAEESLAQGLEASRRRVDRQDRKSFVAPAGAAVVLDPRDGSVLAMASFPTYDPSAFVRGISPELFRTLQDKANHFPLTNRAIQGQYAPGSTFKLITALAALQRGAITPDTTLVDEGFFRLRSCRGER---CTFRNAGSRAYGKVNLTRALTVSSDVFFYNLG 403          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A6N7FW35_9ACTN (Penicillin-binding protein 2 (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FW35_9ACTN)

HSP 1 Score: 137 bits (345), Expect = 1.390e-34
Identity = 77/170 (45.29%), Postives = 109/170 (64.12%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHV-ADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLD-RSDTPLLDRSIKGLYPAGSTFKHVTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYALG 168
            ID+ LQ   E++LA  L  ARQ+       P   A AGS+V +DV+ G + A+A+FP YDP++FV G+S+ ++  L D  +  PLL+R+++ +Y  GSTFK VT YAAL +G    D+ + D G + I SC S   +GC+F+NAG A YG V+   +L VSSDTY+Y LG
Sbjct:  266 IDLALQRQTEQLLAKALAEARQQPKREPEDPDATAPAGSVVVLDVQTGELLAMASFPAYDPAEFVGGISSYRFSELNDPAAHHPLLNRAVQSIYAPGSTFKPVTAYAALRTGLLDPDEEYVDRGFYEIESCQSEGGAGCEFQNAGRAAYGRVDFHRSLVVSSDTYYYRLG 435          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A7V8X094_9ACTN (Penicillin-binding protein 2 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X094_9ACTN)

HSP 1 Score: 134 bits (337), Expect = 1.880e-33
Identity = 73/169 (43.20%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLL-DRSDTPLLDRSIKGLYPAGSTFKHVTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYALG 168
            +D+ +Q  AE+ L +EL  AR+R   RG  P+VA AGS+V     DG++ A+A++P++DPS F  G+  +++ +L  + S  P  +R+I G Y  GSTFK +T YAAL SG RA  D ++D G + I +C+      C   NAG   YG V++AEA+ VSSD YFY +G
Sbjct:  251 VDVTIQAIAEQALEEELLNARERRVSRGNDPNVAPAGSVVVESTTDGSIVAMASYPDFDPSTFTDGIDQTEWTALTGEGSYAPFTNRAIAGQYAPGSTFKLITAYAALSSGLRAPADVFHDVGSYRIPNCSGGT---CIKYNAGRTPYGNVDLAEAITVSSDAYFYEIG 416          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: UPI001E3D41DC (penicillin-binding protein 2 n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E3D41DC)

HSP 1 Score: 133 bits (335), Expect = 3.300e-33
Identity = 79/169 (46.75%), Postives = 101/169 (59.76%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSD-TPLLDRSIKGLYPAGSTFKHVTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYALG 168
            IDID+Q  +E+ LAD L   R +          A AG+   VD + G V ALAT+P+YDP++FV G+S  +Y  L D    + L+DRSI G Y  GSTFK VT  AAL +G    +D++ND G+F I         G +F NAG AVYG V+M  AL VS DTYFY+LG
Sbjct:  248 IDIDVQRRSEQALADRLAYWRGKPQSGADLRRNAPAGAAAVVDPQGGAVRALATYPSYDPAEFVGGISQQRYDQLTDVGGVSALVDRSISGQYAPGSTFKLVTADAALTNGVYGPNDWYNDTGVFEIG--------GQEFTNAGGAVYGSVDMRRALTVSVDTYFYSLG 408          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A2E4XMK6_9ACTN (Penicillin-binding protein 2 (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XMK6_9ACTN)

HSP 1 Score: 132 bits (331), Expect = 1.130e-32
Identity = 78/177 (44.07%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDAC---RGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSDT-PLLDRSIKGLYPAGSTFKHVTGYAALVSGARAA------DDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYAL 167
            IDIDLQ  AE+ L D L++ARQ+       G   + A AG++V ++ +DG++ ALA+ P YDP  FV G+   ++  L+D  ++ PLL+R+I+G YP GSTFK  T YAAL +G   +      +  + DEGIFTI +C   E   C+F+NAG + YG V++  AL  SSD YFY L
Sbjct:  255 IDIDLQAMAEKYLKDGLDIARQQPTKFEEEGVIIYKAPAGAMVVMNPQDGSIIALASHPTYDPELFVSGIGQDEFDDLIDPGNSLPLLNRTIQGTYPPGSTFKPFTAYAALDTGLIGSRGILGVNSMYLDEGIFTIPTC---EGGTCEFQNAGASAYGEVDLRLALTYSSDVYFYNL 428          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A7W2C9K7_9ACTN (Penicillin-binding protein 2 n=5 Tax=Acidimicrobiales TaxID=84993 RepID=A0A7W2C9K7_9ACTN)

HSP 1 Score: 130 bits (327), Expect = 4.780e-32
Identity = 81/177 (45.76%), Postives = 106/177 (59.89%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDAC---RGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSD-TPLLDRSIKGLYPAGSTFKHVTGYAALVSGARAA------DDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYAL 167
            I+IDLQ  AE+ L   L LARQ+       G     A AG++V +D RDG + A+A++P +DP  FV G+S   +  L D  +  PLL+R+I+G YP GSTFK  T YAAL +G   +      D  + DEGIFTI +C   E   CQF+NAG+A YG V++  AL  SSD YFY L
Sbjct:  256 INIDLQALAEKELERGLNLARQQPTKFEEEGVVIFNAPAGAMVLLDPRDGAILAMASYPTFDPELFVSGISQDDFDELTDPGNFLPLLNRTIQGTYPPGSTFKPFTAYAALDTGLIGSRGILGIDSMFYDEGIFTIPNC---EGGTCQFQNAGEAEYGDVDLRLALTYSSDVYFYNL 429          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A3C0HTG2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HTG2_9ACTN)

HSP 1 Score: 125 bits (313), Expect = 2.010e-30
Identity = 73/174 (41.95%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSD-TPLLDRSIKGLYPAGSTFKHVTGYAALVSGA------RAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYAL 167
            ID+DLQ  AE+ L   L  AR R    G  P+VA AGS+VA+D R+G + A+A+FP Y+P+DFV G++ +Q++ L    + +P+L+R+I+G Y  GSTFK +T  AAL  G       R   D + D G +T S+C   E S C F +        V++  +L VSSDTYFY +
Sbjct:   95 IDLDLQALAEQELTTGLAAARSRTPQEGAPPNVAAAGSVVAIDPRNGDLLAMASFPTYEPADFVNGITATQFRELTSEDNFSPILNRAIQGTYAPGSTFKLITALAALQEGVLGDAGLRRPTDLYLDTGTYTYSNCFE-ESSTCLFSSPYTGGGRQVDLPASLRVSSDTYFYEI 267          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A2E8LEZ6_9ACTN (Beta-lactamase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LEZ6_9ACTN)

HSP 1 Score: 125 bits (313), Expect = 3.840e-30
Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSD-TPLLDRSIKGLYPAGSTFKHVTGYAALVSGA------RAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYAL 167
            ID+DLQ  AE  LA  L  AR R    G  P+VA AGS+VAVD R+G + A+A+FP Y+P+DFV G++ +Q++ L    + +P+L+R+I+G Y  GSTFK VT  AAL  G       R   D + D G +T S+C   E S C F +        V++  AL VSSDTYFY +
Sbjct:  257 IDLDLQALAEHELATGLATARARTLQDGDPPNVAAAGSVVAVDSRNGDLLAMASFPTYEPADFVNGITATQFRELTSEDNFSPILNRAIQGTYAPGSTFKLVTALAALQEGVLGDEGLRRPTDRYLDTGAYTYSNCL-LESSTCLFSSPYTGGGRQVDLTAALRVSSDTYFYEI 429          
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Match: A0A2E0T3L9_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T3L9_9ACTN)

HSP 1 Score: 122 bits (307), Expect = 7.320e-30
Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 0
Query:    1 IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVTALATFPNYDPSDFVFGMSTSQYQSLLDRSD-TPLLDRSIKGLYPAGSTFKHVTGYAALVSGA------RAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYVNMAEALEVSSDTYFYAL 167
            ID+DLQ  AE  LA  L  AR R    G  P+ A +GS+VA+D R+G + A+A+FP Y+P+DFV G++ +Q++ L    + +P+L+R+I+G Y  GSTFK +T  AAL  G       R   D + D G +T S+C   E S C F +        V++  +L VSSDTYFY +
Sbjct:  257 IDLDLQALAEHELATGLAAARSRTPQDGAPPNAAASGSVVAIDPRNGDLLAMASFPTYEPADFVNGITATQFRELTSEDNFSPILNRAIQGTYAPGSTFKLITALAALQEGVLGEAGLRRPTDLYLDTGTYTYSNCFE-ESSTCLFSSPYTGGGRQVDLPASLRVSSDTYFYEI 429          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126165.5276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A349B8C3_9ACTN2.730e-3746.15Penicillin-binding protein 2 n=1 Tax=Acidimicrobia... [more]
A0A2N5JW78_9ACTN1.330e-3547.34Penicillin-binding protein 2 n=1 Tax=Actinomycetia... [more]
A0A6N7FW35_9ACTN1.390e-3445.29Penicillin-binding protein 2 (Fragment) n=1 Tax=Ac... [more]
A0A7V8X094_9ACTN1.880e-3343.20Penicillin-binding protein 2 n=1 Tax=Acidimicrobii... [more]
UPI001E3D41DC3.300e-3346.75penicillin-binding protein 2 n=1 Tax=Rhabdothermin... [more]
A0A2E4XMK6_9ACTN1.130e-3244.07Penicillin-binding protein 2 (Fragment) n=1 Tax=Ac... [more]
A0A7W2C9K7_9ACTN4.780e-3245.76Penicillin-binding protein 2 n=5 Tax=Acidimicrobia... [more]
A0A3C0HTG2_9ACTN2.010e-3041.95Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A2E8LEZ6_9ACTN3.840e-3044.25Beta-lactamase n=4 Tax=Acidimicrobiaceae bacterium... [more]
A0A2E0T3L9_9ACTN7.320e-3041.38Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.710.10coord: 1..168
e-value: 3.6E-32
score: 113.7
NoneNo IPR availablePANTHERPTHR30627PENICILLIN-BINDING PROTEIN 2coord: 1..168
NoneNo IPR availablePANTHERPTHR30627:SF2PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDAcoord: 1..168
IPR001460Penicillin-binding protein, transpeptidasePFAMPF00905Transpeptidasecoord: 37..167
e-value: 1.8E-13
score: 50.4
IPR012338Beta-lactamase/transpeptidase-likeSUPERFAMILY56601beta-lactamase/transpeptidase-likecoord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126165contigM-pyrifera_M_contig126165:6..509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126165.5276.1mRNA_M-pyrifera_M_contig126165.5276.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126165 6..509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126165.5276.1 ID=prot_M-pyrifera_M_contig126165.5276.1|Name=mRNA_M-pyrifera_M_contig126165.5276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
IDIDLQYAAERILADELELARQRDACRGCKPHVADAGSLVAVDVRDGTVT
ALATFPNYDPSDFVFGMSTSQYQSLLDRSDTPLLDRSIKGLYPAGSTFKH
VTGYAALVSGARAADDFWNDEGIFTISSCTSAEKSGCQFRNAGDAVYGYV
NMAEALEVSSDTYFYALG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001460PCN-bd_Tpept
IPR012338Beta-lactam/transpept-like