prot_M-pyrifera_M_contig1261.5268.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1261.5268.1
Unique Nameprot_M-pyrifera_M_contig1261.5268.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length349
Homology
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BLAST of mRNA_M-pyrifera_M_contig1261.5268.1 vs. uniprot
Match: D7FJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS3_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 2.800e-48
Identity = 111/210 (52.86%), Postives = 125/210 (59.52%), Query Frame = 0 
Query:  140 MTPETRYEQLPEGVRKQIDDLATEIKRRGRKPQGQGEKGKHSDGFGWQRGVADEVSRTNPTHGLGLQAEIRQLRRDLLDLGNEQGTQQLALKELKGDADGTSKQAEVHGTFVVHRLHSQSGLNTVEQLPSDYMWEMVESFEKRLGEYAQAGGSPWEIDAIREQLSDEPLQGGEAAVAPYGQRARVTPDRLAFVIREQWKTFNQVSRCKLR 349
            +TPETRY+QLPE VRKQID LA EIKR                    QRGVADEVSRTNPT GL +QA+IR+LRRDLLDLGNEQGTQ+LA+K+LK DA  TS+QAE                                                 EI A++ QLS+EPLQGGEA  APYGQRARVTP RLAFVIREQ KTFNQ  RC++R
Sbjct:  165 ITPETRYDQLPEVVRKQIDQLAEEIKR--------------------QRGVADEVSRTNPTDGLAVQAQIRELRRDLLDLGNEQGTQKLAMKDLKADAGKTSRQAE-------------------------------------------------EIHAMQVQLSEEPLQGGEAT-APYGQRARVTPGRLAFVIREQMKTFNQ--RCRIR 302
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BLAST of mRNA_M-pyrifera_M_contig1261.5268.1 vs. uniprot
Match: A0A6H5KNK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK5_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.800e-10
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:  302 QLSDEPLQGGEAAVAPYGQRARVTPDRLAFVIREQWKTFNQVS 344
            QLS+EPLQGGEA  APYGQRARVTP RLAFVIREQ KTFNQ++
Sbjct:    4 QLSEEPLQGGEAP-APYGQRARVTPGRLAFVIREQMKTFNQIA 45
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1261.5268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJS3_ECTSI2.800e-4852.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNK5_9PHAE1.800e-1083.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024882Nucleoporin p58/p45PANTHERPTHR13437NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1coord: 187..288
coord: 1..166
NoneNo IPR availablePANTHERPTHR13437:SF2NUCLEOPORIN P58/P45coord: 187..288
NoneNo IPR availablePANTHERPTHR13437:SF2NUCLEOPORIN P58/P45coord: 1..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1261contigM-pyrifera_M_contig1261:2178..4617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1261.5268.1mRNA_M-pyrifera_M_contig1261.5268.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1261 2178..4617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1261.5268.1 ID=prot_M-pyrifera_M_contig1261.5268.1|Name=mRNA_M-pyrifera_M_contig1261.5268.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp
FSFGAPAPAPAAATTSLFGAAPAAAAPTPAAGSAFGFGSLTPAAPSNTSA
FGGGFGAPAAAPAPAAGGFFGAAAPAAAPATSGFGFGAAPAAAAPAAGAG
FGFKMAAPTAAATAAGAAPAFGAAAAAPGMPGAPGTAPEMTPETRYEQLP
EGVRKQIDDLATEIKRRGRKPQGQGEKGKHSDGFGWQRGVADEVSRTNPT
HGLGLQAEIRQLRRDLLDLGNEQGTQQLALKELKGDADGTSKQAEVHGTF
VVHRLHSQSGLNTVEQLPSDYMWEMVESFEKRLGEYAQAGGSPWEIDAIR
EQLSDEPLQGGEAAVAPYGQRARVTPDRLAFVIREQWKTFNQVSRCKLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024882Nucleoporin_p58/p45