mRNA_M-pyrifera_M_contig126065.5265.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A7S1GB03_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB03_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.000e-28 Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 1 SCLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYVR 321
+C +D AM+ + S+ YG TKPLP LW +FP PA TIM DD RRNFL+N +GLRIK C++LP+TR D EL L YLL I L F L HRRW+ YVR
Sbjct: 234 ACFMDHGAMITVKSADYGL-FNTKPLPVLWGQFPEFASPANTIMFDDLRRNFLMNPDNGLRIKACRNLPVTRSEDRELLRLTEYLLLIKDLDTFEGLDHRRWKDYVR 339
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A150GDT8_GONPE (Protein-serine/threonine phosphatase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDT8_GONPE) HSP 1 Score: 106 bits (265), Expect = 1.090e-25 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 4 CLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
CL+D AMV + + KYG KPL F+W+KFP PA TIMLDD +RN+++N + GL I+P + LTR TD EL L+ YL AIAPL +L H RW Y+
Sbjct: 190 CLMDHTAMVTVHTDKYGV-FDCKPLQFVWEKFPGQYTPANTIMLDDLKRNYIMNPQQGLVIRPFRKAHLTRGTDRELLGLRAYLAAIAPLDSLEALDHNRWERYL 293
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: C1MZ49_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MZ49_MICPC) HSP 1 Score: 106 bits (264), Expect = 1.740e-25 Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 7 LVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
LVD AM+ + + KYG KPL +LW KF TIM DD RRNF++N ++GL+I+P + + TDVELR+L YLLAIAPLPDF L+H RW +Y+
Sbjct: 211 LVDHGAMITVHTEKYGV-FDCKPLGWLWAKFDGRYGEHNTIMFDDLRRNFVMNPKNGLKIRPFRKAHMNMATDVELRELTKYLLAIAPLPDFGVLRHSRWESYI 313
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: UPI00140304C5 (ubiquitin-like domain-containing CTD phosphatase 1 isoform X1 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140304C5) HSP 1 Score: 105 bits (261), Expect = 5.290e-25 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 SCLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAY 315
S ++D AM+ +F+ KYG + KPL +W KFP P TIMLDD RRNFL+N ++GL+IKP +TRETD EL L YLL IA L DF+SL H+ W Y
Sbjct: 212 SFMLDSAAMITVFTPKYGV-VEVKPLGVIWGKFPDVYGPGNTIMLDDIRRNFLMNPQNGLKIKPFMKAHVTRETDRELVKLSKYLLKIAQLDDFTSLNHKHWERY 315
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A835XLG6_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLG6_9CHLO) HSP 1 Score: 104 bits (260), Expect = 7.520e-25 Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 1 SCLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
+CL+D AMV + + KYG KPL F+W KFP PA TIMLDD +RN+++N + GL I+P + LTR TD EL+ L YL +IAPL +L H RW Y+
Sbjct: 214 TCLLDHTAMVTVCTDKYGV-FDCKPLQFIWDKFPGQYTPANTIMLDDLKRNYIMNPQQGLVIRPFRKAHLTRGTDRELKGLTAYLASIAPLDSLEALDHGRWERYL 318
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A150GDU8_GONPE (FCP1 homology domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDU8_GONPE) HSP 1 Score: 106 bits (265), Expect = 1.170e-24 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 4 CLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
CL+D AMV + + KYG KPL F+W+KFP PA TIMLDD +RN+++N + GL I+P + LTR TD EL L+ YL AIAPL +L H RW Y+
Sbjct: 480 CLMDHTAMVTVHTDKYGV-FDCKPLQFVWEKFPGQYTPANTIMLDDLKRNYIMNPQQGLVIRPFRKAHLTRGTDRELLGLRAYLAAIAPLDSLEALDHNRWERYL 583
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: D8UJR9_VOLCA (Protein-serine/threonine phosphatase n=3 Tax=Volvox TaxID=3066 RepID=D8UJR9_VOLCA) HSP 1 Score: 101 bits (251), Expect = 1.100e-23 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 4 CLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
CL+D AMV + + KYG KPL F+W+KFP A TIMLDD +RN+++N + GL I+P + LTR +D EL L YL AIAPL L H RW Y+
Sbjct: 193 CLLDHTAMVTVHTEKYGV-FDCKPLQFIWEKFPGQYTEANTIMLDDLKRNYIMNPQQGLVIRPFRKAHLTRGSDRELLGLMAYLAAIAPLDSLEELDHSRWERYI 296
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A835WQI3_9CHLO (Protein-serine/threonine phosphatase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WQI3_9CHLO) HSP 1 Score: 100 bits (250), Expect = 2.680e-23 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 4 CLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
CL+D AMV + + KYG KPL F+W+KFP P TIMLDD +RN+++N + GL I+P + LTR TD EL L YL AIAPL ++L H RW ++
Sbjct: 213 CLLDHTAMVTVHTDKYGV-FDCKPLQFIWEKFPGQYTPDNTIMLDDLKRNYIMNPQQGLVIRPFRKAHLTRGTDRELVGLTRYLAAIAPLDSLAALDHNRWERWL 316
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: E1ZGY2_CHLVA (Protein-serine/threonine phosphatase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGY2_CHLVA) HSP 1 Score: 99.0 bits (245), Expect = 1.740e-22 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 SCLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYVR 321
+C++D AM+ + KYG KPL FLW KFP H TIM+DD RRN++LN+++GL I+P K LTR TD EL L YL IA L + L HR W +Y +
Sbjct: 223 TCMLDHRAMLTVQHPKYGL-FDCKPLQFLWAKFPEHYGAHNTIMMDDLRRNYVLNKQNGLVIRPFKKAHLTRATDRELLYLTAYLQKIAALDSLAGLNHRHWESYAK 328
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Match: A0A8J9S4T0_9CHLO (Ubiquitin-like domain-containing CTD phosphatase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S4T0_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 1.800e-22 Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1 SCLVDKNAMVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHGLRIKPCKDLPLTRETDVELRDLKIYLLAIAPLPDFSSLKHRRWRAYV 318
+ +D MV + ++KYG KPLP LW K P + P TIM DD RRN+ N ++GL I+P K L R TD EL LKIYLL IA L F++LKH+RW Y+
Sbjct: 158 TAFMDHKCMVTIQTAKYGV-FDCKPLPVLWAKIPEY-TPENTIMFDDLRRNYAFNPQNGLVIRPYKRAHLNRSTDKELLYLKIYLLKIANLESFATLKHKRWERYI 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126065.5265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126065.5265.1 >prot_M-pyrifera_M_contig126065.5265.1 ID=prot_M-pyrifera_M_contig126065.5265.1|Name=mRNA_M-pyrifera_M_contig126065.5265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp MVPLFSSKYGKNLMTKPLPFLWKKFPTHIVPAKTIMLDDCRRNFLLNRRHback to top mRNA from alignment at M-pyrifera_M_contig126065:61..381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126065.5265.1 ID=mRNA_M-pyrifera_M_contig126065.5265.1|Name=mRNA_M-pyrifera_M_contig126065.5265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig126065:61..381+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126065:61..381+ >mRNA_M-pyrifera_M_contig126065.5265.1 ID=mRNA_M-pyrifera_M_contig126065.5265.1|Name=mRNA_M-pyrifera_M_contig126065.5265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig126065:61..381+ (Macrocystis pyrifera P11B4 male)back to top |