mRNA_M-pyrifera_M_contig126057.5262.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126057.5262.1
Unique NamemRNA_M-pyrifera_M_contig126057.5262.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A2E7K821_9PLAN (WH2 domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K821_9PLAN)

HSP 1 Score: 323 bits (827), Expect = 4.190e-106
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK
Sbjct:  160 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 329          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A517PN18_9PLAN (WH2 domain-containing protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517PN18_9PLAN)

HSP 1 Score: 322 bits (826), Expect = 5.930e-106
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKM+IGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK
Sbjct:  160 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMVIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 329          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A6CC95_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CC95_9PLAN)

HSP 1 Score: 273 bits (699), Expect = 6.940e-87
Identity = 139/170 (81.76%), Postives = 154/170 (90.59%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            LKR+QEL+K +YDFSALITNEKEGV  RKKSM  TR+QL AA+KKKRDETDNAFELRKLAFTHQMDE ERLF E++KM+IGWTTDA  NEGRLVF+LKA+EGTSLD SIKQFATKPSYFANV VK DGILNGRINHPLDEMRK N TAFY LLLPS+++RID+NKDLTD+
Sbjct:  159 LKRIQELLKEKYDFSALITNEKEGVADRKKSMASTRKQLLAAVKKKRDETDNAFELRKLAFTHQMDELERLFVESEKMVIGWTTDAPANEGRLVFTLKALEGTSLDASIKQFATKPSYFANVPVKMDGILNGRINHPLDEMRKENFTAFYKLLLPSLQDRIDANKDLTDE 328          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A355G689_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G689_9PLAN)

HSP 1 Score: 273 bits (698), Expect = 9.800e-87
Identity = 139/170 (81.76%), Postives = 156/170 (91.76%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            L+RVQELI A+YDFSALITNEKEGV+ RKKSM  TREQL AA+KKKRDETDNA+ELRKLAF HQMDE ERLF +++KM+IGWTTDAA+NEGRLVF+LKAIEG+SLDESIKQFATKPSYFANV V+ DGILNGRINHPLDEMRK N TAFY LLLPS++ERI +NKDLTD+
Sbjct:  159 LQRVQELIAAKYDFSALITNEKEGVEERKKSMISTREQLLAAVKKKRDETDNAYELRKLAFIHQMDELERLFVQSEKMVIGWTTDAAENEGRLVFTLKAIEGSSLDESIKQFATKPSYFANVPVQMDGILNGRINHPLDEMRKENFTAFYKLLLPSLQERIQANKDLTDE 328          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A518IBZ0_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IBZ0_9PLAN)

HSP 1 Score: 269 bits (687), Expect = 4.240e-85
Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            LKRVQEL+  +YDFSALITNEKEGVD RKKSM  TR+QL AA+KKKRDE++NA+ELRKLAFTHQMDE ERLFAE+QKM+IGWTTDAA++EGRL F+LKAI GTSLDESIKQFA KPSYFA V VKQDGILNGRINHPLDEMRK NIT FY LLLP++KERI +NK+LTD+
Sbjct:  159 LKRVQELLNQKYDFSALITNEKEGVDARKKSMNNTRKQLLAAVKKKRDESENAYELRKLAFTHQMDEVERLFAESQKMVIGWTTDAAEHEGRLDFTLKAIAGTSLDESIKQFAIKPSYFAKVPVKQDGILNGRINHPLDEMRKTNITTFYKLLLPTLKERITNNKNLTDE 328          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A517WV71_9PLAN (WH2 domain-containing protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WV71_9PLAN)

HSP 1 Score: 259 bits (661), Expect = 3.360e-81
Identity = 132/170 (77.65%), Postives = 153/170 (90.00%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTDK 510
            LKRVQEL+  +YDFSALITNEKEGVD RKK+M  TR+QL AAI+KKRDET++AFELRKLAFTHQMDE ERLFAE++KM+IGWTTDA +NEGRL F+LKAIEGTSL++SI+QFA KPSYFANV VKQDGILNGRINHPLDEMRK NIT FY LLLP++KERI  N+ L+++
Sbjct:  159 LKRVQELLNEKYDFSALITNEKEGVDARKKTMDNTRKQLLAAIQKKRDETESAFELRKLAFTHQMDEVERLFAESEKMVIGWTTDATKNEGRLDFTLKAIEGTSLNDSIEQFAKKPSYFANVPVKQDGILNGRINHPLDEMRKKNITDFYKLLLPTLKERITKNEKLSEE 328          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A3B1DBG3_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DBG3_9ZZZZ)

HSP 1 Score: 126 bits (316), Expect = 1.100e-30
Identity = 70/168 (41.67%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    1 LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKK--KRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKD 498
            L  V EL+K  YD +    N   G++ R    + TR++L AA+K+  K+ ET++ F LRK+ FT Q++E ER++AEA+ ++IGWTTD+ + +G L  +LK + GT L++S+K   TKPSYF N+   +  IL+ RIN  LDEMRK +I      L    K ++D  K+
Sbjct:  171 LAEVAELLKLNYDVAIEGKNTPNGIEERHTQFSGTRKELLAALKRNEKKKETEDDFALRKMLFTQQLNELERIYAEAEHLLIGWTTDSKKKQGELNLTLKPLSGTELEKSLKLLGTKPSYFVNIPKAKTSILSARINFALDEMRKKHILETNKTLRKREKTKVDLLKE 338          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A2E7CWJ0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CWJ0_9PLAN)

HSP 1 Score: 124 bits (311), Expect = 4.710e-30
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 1
Query:   34 YDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLL 459
            YD +  +TN ++G D R++      E+L   ++K++ E+D+ F L+K A   Q+ E ER F EA K+++GW TD  +NEGRL   L A+  TSL ESI+  +TKPSYF N++   D IL GR+NHPLD+MRK N +    L+
Sbjct:  171 YDLAIRVTNNEDGQDKRREFFQGLSEELLDGLEKEKGESDDDFVLKKRALETQLQEGERFFVEASKLVLGWNTDPPKNEGRLALHLAALAKTSLLESIEMLSTKPSYFQNIKKADDAILFGRLNHPLDDMRKKNFSDLIKLV 312          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: A0A2E7NNZ8_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NNZ8_9PLAN)

HSP 1 Score: 105 bits (261), Expect = 3.920e-23
Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 1
Query:    7 RVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLTD 507
            R   L    +    LI N+ EG D R+K+    R  LQ+AIK ++DET +   LRK    +++ EAER   E++ + +G+  D    +  L   L AIEGTSLD+SI   +  PS+FA+V   ++ IL+ RI+HPLDE RK ++ A  +    +I+  I+     TD
Sbjct:  215 RAAALAPRRHSVGGLIKNKPEGQDARRKAFVSIRNNLQSAIKTRKDETPSELALRKELRAYELGEAERFVVESESLALGFRIDPKTRQAVLDLDLSAIEGTSLDKSIGSLSKTPSHFASVPSPENSILSFRIHHPLDEFRKTSLQAVLTATRNAIQGDINRTASTTD 381          
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Match: D5ST14_PLAL2 (Uncharacterized protein n=3 Tax=Planctopirus TaxID=1649480 RepID=D5ST14_PLAL2)

HSP 1 Score: 102 bits (254), Expect = 3.350e-22
Identity = 57/167 (34.13%), Postives = 92/167 (55.09%), Query Frame = 1
Query:    4 KRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDETDNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAIEGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFYSLLLPSIKERIDSNKDLT 504
            K  Q L+    D  A + N+   +  R+   TK R +L+AA+K KRDE    FELRKL   HQ+ E ER   +++ +   WTTD    +G     L A+ GT L++SI    TKPS F+ +++    +++G+    LD+MR+ ++  FY ++  +I   I++  +LT
Sbjct:  173 KLAQNLLSGSQDIVADLKNDPATITQRQADFTKLRVELEAAVKFKRDEAKEVFELRKLGTNHQLSELERFIVQSEHLQATWTTDIEAGKGSGTLLLTALPGTELEKSIALLGTKPSAFSAIKLHDQPVISGKTCFELDDMRQKHLIEFYPVMNAAIGVNIENRPNLT 339          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126057.5262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2E7K821_9PLAN4.190e-106100.00WH2 domain-containing protein n=5 Tax=Gimesia TaxI... [more]
A0A517PN18_9PLAN5.930e-10699.41WH2 domain-containing protein n=4 Tax=Gimesia TaxI... [more]
A6CC95_9PLAN6.940e-8781.76Uncharacterized protein n=7 Tax=Planctomycetaceae ... [more]
A0A355G689_9PLAN9.800e-8781.76Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A518IBZ0_9PLAN4.240e-8580.59Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A517WV71_9PLAN3.360e-8177.65WH2 domain-containing protein n=2 Tax=Gimesia aqua... [more]
A0A3B1DBG3_9ZZZZ1.100e-3041.67Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A2E7CWJ0_9PLAN4.710e-3044.37Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E7NNZ8_9PLAN3.920e-2337.13Uncharacterized protein n=3 Tax=Planctomycetaceae ... [more]
D5ST14_PLAL23.350e-2234.13Uncharacterized protein n=3 Tax=Planctopirus TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126057contigM-pyrifera_M_contig126057:1..510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score118.2
Seed ortholog evalue3.6e-24
Seed eggNOG ortholog1123242.JH636434_gene3288
Hectar predicted targeting categoryother localisation
EggNOG OGs29G0X@1,2J2GP@203682,33QQ4@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size510
Cds size510
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.7756627-CDS-M-pyrifera_M_contig126057:0..5101622815775.7756627-CDS-M-pyrifera_M_contig126057:0..510Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126057 1..510 -
1692277563.890701-CDS-M-pyrifera_M_contig126057:0..5101692277563.890701-CDS-M-pyrifera_M_contig126057:0..510Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126057 1..510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126057.5262.1prot_M-pyrifera_M_contig126057.5262.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126057 1..510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126057.5262.1

>prot_M-pyrifera_M_contig126057.5262.1 ID=prot_M-pyrifera_M_contig126057.5262.1|Name=mRNA_M-pyrifera_M_contig126057.5262.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
LKRVQELIKAEYDFSALITNEKEGVDLRKKSMTKTREQLQAAIKKKRDET
DNAFELRKLAFTHQMDEAERLFAEAQKMIIGWTTDAAQNEGRLVFSLKAI
EGTSLDESIKQFATKPSYFANVEVKQDGILNGRINHPLDEMRKANITAFY
SLLLPSIKERIDSNKDLTDK
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mRNA from alignment at M-pyrifera_M_contig126057:1..510-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126057.5262.1 ID=mRNA_M-pyrifera_M_contig126057.5262.1|Name=mRNA_M-pyrifera_M_contig126057.5262.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig126057:1..510- (Macrocystis pyrifera P11B4 male)
CTCAAGCGGGTCCAGGAACTGATCAAAGCCGAATACGATTTCAGTGCACT GATCACGAATGAAAAAGAAGGCGTGGATCTGCGGAAGAAATCCATGACCA AAACCCGCGAACAGCTGCAGGCTGCCATCAAGAAAAAGCGGGATGAAACC GACAATGCTTTTGAACTGCGTAAACTCGCTTTTACCCACCAGATGGATGA AGCCGAGCGACTCTTTGCTGAAGCCCAGAAGATGATCATCGGCTGGACCA CAGACGCAGCTCAGAATGAAGGACGTCTCGTTTTCAGCCTGAAAGCAATC GAGGGAACTTCGCTGGATGAAAGCATCAAACAGTTTGCGACCAAACCCAG CTACTTCGCCAACGTCGAAGTCAAGCAGGACGGAATCTTAAACGGCCGCA TCAATCATCCCCTGGATGAAATGCGCAAAGCCAACATCACCGCTTTCTAC AGTCTGCTGCTCCCCAGCATTAAAGAGCGGATTGATAGTAACAAAGATTT GACCGACAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126057:1..510-

>mRNA_M-pyrifera_M_contig126057.5262.1 ID=mRNA_M-pyrifera_M_contig126057.5262.1|Name=mRNA_M-pyrifera_M_contig126057.5262.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig126057:1..510- (Macrocystis pyrifera P11B4 male)
CTCAAGCGGGTCCAGGAACTGATCAAAGCCGAATACGATTTCAGTGCACT
GATCACGAATGAAAAAGAAGGCGTGGATCTGCGGAAGAAATCCATGACCA
AAACCCGCGAACAGCTGCAGGCTGCCATCAAGAAAAAGCGGGATGAAACC
GACAATGCTTTTGAACTGCGTAAACTCGCTTTTACCCACCAGATGGATGA
AGCCGAGCGACTCTTTGCTGAAGCCCAGAAGATGATCATCGGCTGGACCA
CAGACGCAGCTCAGAATGAAGGACGTCTCGTTTTCAGCCTGAAAGCAATC
GAGGGAACTTCGCTGGATGAAAGCATCAAACAGTTTGCGACCAAACCCAG
CTACTTCGCCAACGTCGAAGTCAAGCAGGACGGAATCTTAAACGGCCGCA
TCAATCATCCCCTGGATGAAATGCGCAAAGCCAACATCACCGCTTTCTAC
AGTCTGCTGCTCCCCAGCATTAAAGAGCGGATTGATAGTAACAAAGATTT
GACCGACAAGCTCAAGCGGGTCCAGGAACTGATCAAAGCCGAATACGATT
TCAGTGCACTGATCACGAATGAAAAAGAAGGCGTGGATCTGCGGAAGAAA
TCCATGACCAAAACCCGCGAACAGCTGCAGGCTGCCATCAAGAAAAAGCG
GGATGAAACCGACAATGCTTTTGAACTGCGTAAACTCGCTTTTACCCACC
AGATGGATGAAGCCGAGCGACTCTTTGCTGAAGCCCAGAAGATGATCATC
GGCTGGACCACAGACGCAGCTCAGAATGAAGGACGTCTCGTTTTCAGCCT
GAAAGCAATCGAGGGAACTTCGCTGGATGAAAGCATCAAACAGTTTGCGA
CCAAACCCAGCTACTTCGCCAACGTCGAAGTCAAGCAGGACGGAATCTTA
AACGGCCGCATCAATCATCCCCTGGATGAAATGCGCAAAGCCAACATCAC
CGCTTTCTACAGTCTGCTGCTCCCCAGCATTAAAGAGCGGATTGATAGTA
ACAAAGATTTGACCGACAAG
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