mRNA_M-pyrifera_M_contig126041.5258.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126041.5258.1
Unique NamemRNA_M-pyrifera_M_contig126041.5258.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: UPI0012D39A34 (lysophospholipid acyltransferase 1 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D39A34)

HSP 1 Score: 69.7 bits (169), Expect = 9.540e-12
Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 1
Query:    7 DRVPEWDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLAAPRL 288
            D  P+WD ++N+++   E AT++R  + +WNM   QWL ++         G  +T     + +SALWHGF+ GYY+ +I G  +V A   A +L
Sbjct:  320 DGNPKWDLISNINVISFELATNIRDAIGNWNMGTNQWLRMIVYERVPKKYGTMLT-----FGLSALWHGFYPGYYITFISGALIVNAARTARKL 408          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: T1EGR0_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EGR0_HELRO)

HSP 1 Score: 65.5 bits (158), Expect = 2.770e-10
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   22 WDGVANVSIPEVETATSVRAILRHWNMPVQQWLS-IVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQG-FALVAADLAAPRLLPSF 300
            WD + NVS+ +VE ATS+R +L +WN     WL  +V+      L         AV+ +SALWHGF+ GYYV ++ G F +  + +  P + P F
Sbjct:  309 WDFMDNVSVFKVEFATSIRTLLSNWNSRSTLWLRHVVYERTHNTL---------AVFAMSALWHGFYPGYYVTFMTGAFLVYESRMVRPIIRPKF 394          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: A0A3M6VD71_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD71_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.830e-10
Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 1
Query:   22 WDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYI 243
            WDGV+NV I   E   +VR I R WN   Q WL    R+  T  G   +    A YT+SALWHGF+ GYY+ ++
Sbjct:  321 WDGVSNVDILGFELGANVRDISRAWNKGTQNWLE---RYVYTRTGNSLL----ATYTVSALWHGFYPGYYLFFL 387          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: UPI0016156DFF (lysophospholipid acyltransferase 1-like n=3 Tax=Vespa TaxID=7443 RepID=UPI0016156DFF)

HSP 1 Score: 64.7 bits (156), Expect = 5.420e-10
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 1
Query:   16 PEWDGVANVSIPEVETATSVRAILRHWNMPVQQWL-SIVFRHARTLLGGDKMTAAAAVYT--ISALWHGFFSGYYVLYIQG--FALVA 264
            P WD  ANV++   ET+ S+R  + +WNM   +WL SIV+         D+M     ++T  +SALWHGF+ GYY+ +  G  F LVA
Sbjct:  440 PRWDKFANVNVINFETSLSLRDSINNWNMGTNRWLRSIVY---------DRMKKQRMIFTYALSALWHGFYPGYYLTFANGAYFTLVA 518          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: UPI001CF5F61E (lysophospholipid acyltransferase 2-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5F61E)

HSP 1 Score: 64.3 bits (155), Expect = 7.260e-10
Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 1
Query:   22 WDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLAAPR 285
            W+ V NV++ E+ET+T+ RA++++WNM    WL          L   + T     YT+S +WHGF+ GYY+ ++    ++ A     R
Sbjct:  304 WNRVTNVNVVELETSTNFRAMVQNWNMQTNLWLKRTVYDRVPHLAPYQRTMLT--YTVSTIWHGFYPGYYLTFLNAILIIVATRTVRR 389          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: D0MV89_PHYIT (Lysophospholipid acyltransferase, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MV89_PHYIT)

HSP 1 Score: 64.3 bits (155), Expect = 7.280e-10
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 1
Query:   22 WDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYI 243
            WDGV+NV I   E   +VR I R WN   Q WL    R+  T  G   +    A Y++SALWHGF+ GYY+ ++
Sbjct:  361 WDGVSNVDILGFELGANVREISRAWNKGTQNWLE---RYVYTRTGNSLL----ATYSVSALWHGFYPGYYLFFL 427          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: A0A6V7HAP2_9HYME (Hypothetical protein n=1 Tax=Heterotrigona itama TaxID=395501 RepID=A0A6V7HAP2_9HYME)

HSP 1 Score: 63.9 bits (154), Expect = 8.980e-10
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 1
Query:   16 PEWDGVANVSIPEVETATSVRAILRHWNMPVQQWL-SIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQG-FALVAADLAAPRLLPSFL 303
            P+WD  +NV +   E + ++R  + HWN    +WL SIV+          K       Y +SALWHGF+ GYY+ +  G F  VA+ +A   + P FL
Sbjct:  184 PKWDLASNVDVYGFEMSLNLRDSIEHWNKGTNRWLRSIVYERV-------KQNKVMFTYALSALWHGFYPGYYLTFANGAFFTVASRVARRNIRPYFL 274          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: A0A0P1AIN4_PLAHL (Lysophospholipid acyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIN4_PLAHL)

HSP 1 Score: 63.9 bits (154), Expect = 9.850e-10
Identity = 35/88 (39.77%), Postives = 45/88 (51.14%), Query Frame = 1
Query:   22 WDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLAAPR 285
            WDGV+NV I   E   +VR I R WN   Q WL    R+  T  G   +    A Y +SALWHGF+ GYY+ ++      A +  A R
Sbjct:  323 WDGVSNVDIIGFELGANVREISRAWNKGTQNWLE---RYVYTRTGNSLL----ATYLVSALWHGFYPGYYLFFLTVPLATAVNRLARR 403          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: UPI0008F98E0C (lysophospholipid acyltransferase 1 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F98E0C)

HSP 1 Score: 63.9 bits (154), Expect = 9.950e-10
Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1
Query:   13 VPEWDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLAAPR 285
            V  WD V NV+IP+ E   + +  +  WNM   +WL ++  + RT     K  + A  + +SALWHGF+ GYY+ +  G   ++A  A  R
Sbjct:  343 VSRWDLVTNVNIPKFEFGVNFKETIDGWNMGTNRWLRLIV-YNRT-----KKFSTALTFALSALWHGFYPGYYLTFANGALFISAARAVRR 427          
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Match: A0A6I9NWK9_9TELE (lysophospholipid acyltransferase 2 n=2 Tax=Perciformes TaxID=8111 RepID=A0A6I9NWK9_9TELE)

HSP 1 Score: 63.5 bits (153), Expect = 1.300e-9
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 1
Query:    7 DRVPEWDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTLLGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLA 276
            D  P WD V+N+ I ++E ATS +  L +WN+    WL       R           AA + +SA+WHG++ GYY+ ++ G A+  A  A
Sbjct:  218 DGSPRWDLVSNLRILDIEFATSFKMFLDNWNIQTALWLK------RVCYERCPFNPMAATFLLSAMWHGYYPGYYLTFLTGIAMTMAARA 301          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126041.5258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0012D39A349.540e-1235.11lysophospholipid acyltransferase 1 n=1 Tax=Contari... [more]
T1EGR0_HELRO2.770e-1037.89Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A3M6VD71_9STRA2.830e-1044.59Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
UPI0016156DFF5.420e-1040.91lysophospholipid acyltransferase 1-like n=3 Tax=Ve... [more]
UPI001CF5F61E7.260e-1032.95lysophospholipid acyltransferase 2-like isoform X1... [more]
D0MV89_PHYIT7.280e-1043.24Lysophospholipid acyltransferase, putative n=13 Ta... [more]
A0A6V7HAP2_9HYME8.980e-1035.71Hypothetical protein n=1 Tax=Heterotrigona itama T... [more]
A0A0P1AIN4_PLAHL9.850e-1039.77Lysophospholipid acyltransferase n=1 Tax=Plasmopar... [more]
UPI0008F98E0C9.950e-1035.16lysophospholipid acyltransferase 1 n=1 Tax=Bemisia... [more]
A0A6I9NWK9_9TELE1.300e-934.44lysophospholipid acyltransferase 2 n=2 Tax=Percifo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126041contigM-pyrifera_M_contig126041:157..459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score65.9
Seed ortholog evalue1.3e-08
Seed eggNOG ortholog31033.ENSTRUP00000036468
Preferred nameMBOAT2
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K13517
KEGG ReactionR02241,R04480,R09035,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007009,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008150,GO:0008152,GO:0008354,GO:0008374,GO:0009653,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016043,GO:0016411,GO:0016477,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0036151,GO:0036152,GO:0040011,GO:0042171,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046470,GO:0046486,GO:0047144,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0061024,GO:0071617,GO:0071704,GO:0071840,GO:0097164,GO:0098827,GO:1901564
EggNOG free text desc.Membrane bound O-acyltransferase domain containing
EggNOG OGs38FKU@33154,3BA9H@33208,3CV94@33213,4813C@7711,495R4@7742,49XC6@7898,COG5202@1,KOG2704@2759
EC2.3.1.51
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons1
Model size303
Cds size303
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.6167455-CDS-M-pyrifera_M_contig126041:156..4591622815775.6167455-CDS-M-pyrifera_M_contig126041:156..459Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126041 157..459 +
1692277563.830557-CDS-M-pyrifera_M_contig126041:156..4591692277563.830557-CDS-M-pyrifera_M_contig126041:156..459Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126041 157..459 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126041.5258.1prot_M-pyrifera_M_contig126041.5258.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126041 157..459 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126041.5258.1

>prot_M-pyrifera_M_contig126041.5258.1 ID=prot_M-pyrifera_M_contig126041.5258.1|Name=mRNA_M-pyrifera_M_contig126041.5258.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
MLDRVPEWDGVANVSIPEVETATSVRAILRHWNMPVQQWLSIVFRHARTL
LGGDKMTAAAAVYTISALWHGFFSGYYVLYIQGFALVAADLAAPRLLPSF
L
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mRNA from alignment at M-pyrifera_M_contig126041:157..459+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126041.5258.1 ID=mRNA_M-pyrifera_M_contig126041.5258.1|Name=mRNA_M-pyrifera_M_contig126041.5258.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig126041:157..459+ (Macrocystis pyrifera P11B4 male)
ATGCTGGATCGCGTGCCTGAGTGGGATGGAGTGGCGAATGTGAGCATTCC GGAAGTGGAAACTGCCACTTCTGTGCGTGCCATCCTCAGGCACTGGAATA TGCCGGTGCAGCAATGGCTCAGCATTGTATTTCGGCATGCAAGGACATTG CTGGGTGGAGACAAGATGACTGCTGCTGCTGCTGTGTACACCATTTCTGC GCTGTGGCACGGTTTCTTCTCAGGATACTACGTGCTCTACATCCAAGGAT TCGCTCTCGTGGCTGCCGACCTCGCAGCACCTCGACTCCTCCCTTCCTTC CTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126041:157..459+

>mRNA_M-pyrifera_M_contig126041.5258.1 ID=mRNA_M-pyrifera_M_contig126041.5258.1|Name=mRNA_M-pyrifera_M_contig126041.5258.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig126041:157..459+ (Macrocystis pyrifera P11B4 male)
ATGCTGGATCGCGTGCCTGAGTGGGATGGAGTGGCGAATGTGAGCATTCC
GGAAGTGGAAACTGCCACTTCTGTGCGTGCCATCCTCAGGCACTGGAATA
TGCCGGTGCAGCAATGGCTCAGCATTGTATTTCGGCATGCAAGGACATTG
CTGGGTGGAGACAAGATGACTGCTGCTGCTGCTGTGTACACCATTTCTGC
GCTGTGGCACGGTTTCTTCTCAGGATACTACGTGCTCTACATCCAAGGAT
TCGCTCTCGTGGCTGCCGACCTCGCAGCACCTCGACTCCTCCCTTCCTTC
CTCATGCTGGATCGCGTGCCTGAGTGGGATGGAGTGGCGAATGTGAGCAT
TCCGGAAGTGGAAACTGCCACTTCTGTGCGTGCCATCCTCAGGCACTGGA
ATATGCCGGTGCAGCAATGGCTCAGCATTGTATTTCGGCATGCAAGGACA
TTGCTGGGTGGAGACAAGATGACTGCTGCTGCTGCTGTGTACACCATTTC
TGCGCTGTGGCACGGTTTCTTCTCAGGATACTACGTGCTCTACATCCAAG
GATTCGCTCTCGTGGCTGCCGACCTCGCAGCACCTCGACTCCTCCCTTCC
TTCCTC
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