mRNA_M-pyrifera_M_contig126031.5255.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126031.5255.1
Unique NamemRNA_M-pyrifera_M_contig126031.5255.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A0P7UM07_SCLFO (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7UM07_SCLFO)

HSP 1 Score: 103 bits (257), Expect = 7.380e-25
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            EK +SH LVTSGVY CCRHP+Y GW++++I TQ++L NPI +L Y+ AS  FF  R+E EE +LI FFG +Y+DY     +    G+P +PG
Sbjct:  200 EKAQSHVLVTSGVYSCCRHPSYVGWFYWSIGTQVMLCNPICVLGYLFASWRFFRERIEEEEISLIHFFGDEYLDYKQRVPT----GLPFIPG 287
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A3B3RML1_9TELE (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RML1_9TELE)

HSP 1 Score: 101 bits (251), Expect = 4.810e-24
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            EK +SH LVT+G+Y CCRHP+Y GW++++I TQ++L NP+ LL Y  AS  FF  R+E EE +LI FFG +Y+DY     +    G+P +PG
Sbjct:  191 EKAQSHVLVTAGIYSCCRHPSYVGWFYWSIGTQVMLCNPLCLLGYTLASWRFFRERVEEEELSLILFFGEEYLDYKRKVPT----GLPFIPG 278
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A7S0LDN9_9EUKA (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LDN9_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 2.650e-23
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLV 270
            E+R  H LVT+G+Y   RHPAYFG++WF+I TQLLL+NPI LL Y AAS  FF +R+  EE  L+ FFG +Y++Y   T      GIPL+
Sbjct:  122 ERRCEHRLVTTGIYAVLRHPAYFGFFWFSIGTQLLLANPICLLAYTAASWHFFFDRIPYEEQLLVHFFGDEYLEYRKRT----WIGIPLM 207
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: F0ZZB8_DICPU (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZB8_DICPU)

HSP 1 Score: 97.4 bits (241), Expect = 6.920e-23
Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLV 270
            EKR +HELVT+G+Y+  RHP+YFGW+ +++STQL+L NPIS++ +  AS  FFSNR+E EE  LI FFG  Y DY  +    + SGIP +
Sbjct:  158 EKRETHELVTTGIYKFMRHPSYFGWFLWSVSTQLVLLNPISIVGFGWASFKFFSNRIEYEEDYLIDFFGKSYKDYKEN----VWSGIPFI 243
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A151ZB43_9MYCE (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZB43_9MYCE)

HSP 1 Score: 97.1 bits (240), Expect = 8.450e-23
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1 
Query:    4 KRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLV 270
            KR+ HELVT+G+Y   RHP+YFGW+ +++STQL L NPI ++ Y  AS  FF+ R+E EE  LIKFFG QY++Y       + SGIPL+
Sbjct:  152 KRKEHELVTTGIYSYLRHPSYFGWFIWSVSTQLTLFNPICIIGYTFASWAFFNERIEEEEEFLIKFFGQQYVEYKKR----VWSGIPLI 236
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A6J1WNU0_GALME (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WNU0_GALME)

HSP 1 Score: 98.2 bits (243), Expect = 8.900e-23
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 1 
Query:    4 KRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            KR  H+LVT GVY  CRHP+Y GW++++I TQ++L NPI +++Y  AS  FF  R+  EE  L+ FFG QY +Y       +G+G+PL+PG
Sbjct:  192 KRPDHQLVTHGVYALCRHPSYVGWFYWSIGTQIILLNPICIIVYTLASWTFFRERVYAEELTLLAFFGPQYAEYQKK----VGTGLPLIPG 278
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A7J7K812_BUGNE (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K812_BUGNE)

HSP 1 Score: 98.2 bits (243), Expect = 1.060e-22
Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            EK   HELVT GVY   RHP+Y GW+W++I TQL+L NP+ ++LY  AS  FF++R+  EE  L+KFFGT+Y +Y       +G GIP + G
Sbjct:  196 EKDEEHELVTHGVYALFRHPSYVGWFWWSIGTQLILFNPVCVVLYAIASWKFFNDRIYSEEMTLLKFFGTKYAEYQGR----VGIGIPFISG 283
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: B3RZB1_TRIAD (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Trichoplax TaxID=10227 RepID=B3RZB1_TRIAD)

HSP 1 Score: 98.2 bits (243), Expect = 1.200e-22
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 1 
Query:    1 EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            +K  SHELVT  VY  CRHP+YFGW+W+++ TQ++L NPI  + Y  AS  FF+ R++ EE  L++FFG +Y+DY     S +G GIP + G
Sbjct:  194 KKASSHELVTHDVYSLCRHPSYFGWFWWSVGTQVILCNPICCIGYAFASWNFFNGRIQDEEAYLLQFFGQEYLDYM----SKVGVGIPFIHG 281
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A9UX32_MONBE (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UX32_MONBE)

HSP 1 Score: 95.1 bits (235), Expect = 2.210e-22
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1 
Query:    4 KRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            K  SHELVT+G+Y  CRHPAY GW+W+A+ TQ+LL NP   + Y  A+  FF++RLE EE +L+ FFGTQY  Y     +    G+P V G
Sbjct:   94 KLESHELVTTGIYSLCRHPAYAGWFWWAVGTQVLLCNPFCSIAYGWAAYRFFADRLEYEEYHLLLFFGTQYHRYQQRVPT----GVPFVQG 180
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BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Match: A0A6J1N1F7_BICAN (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1N1F7_BICAN)

HSP 1 Score: 95.1 bits (235), Expect = 4.140e-22
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 1 
Query:    4 KRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAASTFFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPG 276
            K   H LVT GVY  CRHP+Y GW+++++ TQ++L NPI +L+Y   S  FF +R+  EE  LI FFGTQY+DY       +G+G+P + G
Sbjct:  135 KSPDHNLVTHGVYHLCRHPSYVGWFYWSVGTQIILLNPICVLIYTLVSWSFFRDRIFAEEMFLISFFGTQYLDYQKR----VGTGLPFIKG 221
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126031.5255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P7UM07_SCLFO7.380e-2552.17Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A3B3RML1_9TELE4.810e-2450.00Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7S0LDN9_9EUKA2.650e-2353.33Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
F0ZZB8_DICPU6.920e-2353.33Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A151ZB43_9MYCE8.450e-2352.81Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A6J1WNU0_GALME8.900e-2348.35Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7J7K812_BUGNE1.060e-2250.00Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
B3RZB1_TRIAD1.200e-2248.91Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A9UX32_MONBE2.210e-2250.55Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A6J1N1F7_BICAN4.140e-2247.25Protein-S-isoprenylcysteine O-methyltransferase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126031contigM-pyrifera_M_contig126031:2..286 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score97.8
Seed ortholog evalue2.8e-18
Seed eggNOG ortholog10228.TriadP57388
Preferred nameICMT
KEGG rclassRC00003,RC00460
KEGG koko:K00587
KEGG ReactionR04496
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categorysignal anchor
GOsGO:0001701,GO:0001889,GO:0003674,GO:0003824,GO:0003880,GO:0004671,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006139,GO:0006464,GO:0006479,GO:0006481,GO:0006520,GO:0006575,GO:0006605,GO:0006612,GO:0006725,GO:0006790,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008134,GO:0008140,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008284,GO:0008757,GO:0009116,GO:0009119,GO:0009790,GO:0009792,GO:0009966,GO:0009987,GO:0010340,GO:0010646,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016740,GO:0016741,GO:0018410,GO:0019538,GO:0019752,GO:0023051,GO:0031984,GO:0032259,GO:0032501,GO:0032502,GO:0033036,GO:0034613,GO:0034641,GO:0035264,GO:0036211,GO:0040007,GO:0042127,GO:0042175,GO:0042278,GO:0042886,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043436,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046128,GO:0046483,GO:0046498,GO:0046499,GO:0046578,GO:0046907,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048589,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0051056,GO:0051179,GO:0051186,GO:0051234,GO:0051641,GO:0051649,GO:0051998,GO:0055086,GO:0061008,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072521,GO:0072657,GO:0090150,GO:0097164,GO:0098827,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657,GO:1902531
EggNOG free text desc.protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
EggNOG OGs38E6W@33154,3BEU6@33208,COG2020@1,KOG2628@2759
EC2.1.1.100
COG Functional cat.O
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size285
Cds size285
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.5029004-CDS-M-pyrifera_M_contig126031:1..2861622815775.5029004-CDS-M-pyrifera_M_contig126031:1..286Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126031 2..286 +
1692277563.7952514-CDS-M-pyrifera_M_contig126031:1..2861692277563.7952514-CDS-M-pyrifera_M_contig126031:1..286Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126031 2..286 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126031.5255.1prot_M-pyrifera_M_contig126031.5255.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126031 2..286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126031.5255.1

>prot_M-pyrifera_M_contig126031.5255.1 ID=prot_M-pyrifera_M_contig126031.5255.1|Name=mRNA_M-pyrifera_M_contig126031.5255.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp
EKRRSHELVTSGVYRCCRHPAYFGWWWFAISTQLLLSNPISLLLYIAAST
FFFSNRLEVEEPNLIKFFGTQYIDYAASTASLLGSGIPLVPGSKQ
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mRNA from alignment at M-pyrifera_M_contig126031:2..286+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126031.5255.1 ID=mRNA_M-pyrifera_M_contig126031.5255.1|Name=mRNA_M-pyrifera_M_contig126031.5255.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=285bp|location=Sequence derived from alignment at M-pyrifera_M_contig126031:2..286+ (Macrocystis pyrifera P11B4 male)
GAGAAGCGTCGGAGCCACGAGCTTGTGACGAGTGGGGTGTATCGTTGTTG
TCGGCACCCGGCCTACTTTGGGTGGTGGTGGTTCGCCATTTCCACGCAGC
TGCTCCTCTCCAACCCCATCTCCCTGCTCCTCTACATCGCAGCCTCCACC
TTCTTCTTCTCCAACCGCCTCGAAGTGGAAGAGCCAAACCTCATCAAGTT
CTTCGGAACGCAATATATCGACTACGCAGCCTCCACTGCCTCCCTCCTCG
GGTCTGGAATTCCACTCGTCCCAGGATCCAAGCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126031:2..286+

>mRNA_M-pyrifera_M_contig126031.5255.1 ID=mRNA_M-pyrifera_M_contig126031.5255.1|Name=mRNA_M-pyrifera_M_contig126031.5255.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig126031:2..286+ (Macrocystis pyrifera P11B4 male)
GAGAAGCGTCGGAGCCACGAGCTTGTGACGAGTGGGGTGTATCGTTGTTG
TCGGCACCCGGCCTACTTTGGGTGGTGGTGGTTCGCCATTTCCACGCAGC
TGCTCCTCTCCAACCCCATCTCCCTGCTCCTCTACATCGCAGCCTCCACC
TTCTTCTTCTCCAACCGCCTCGAAGTGGAAGAGCCAAACCTCATCAAGTT
CTTCGGAACGCAATATATCGACTACGCAGCCTCCACTGCCTCCCTCCTCG
GGTCTGGAATTCCACTCGTCCCAGGATCCAAGCAAGAGAAGCGTCGGAGC
CACGAGCTTGTGACGAGTGGGGTGTATCGTTGTTGTCGGCACCCGGCCTA
CTTTGGGTGGTGGTGGTTCGCCATTTCCACGCAGCTGCTCCTCTCCAACC
CCATCTCCCTGCTCCTCTACATCGCAGCCTCCACCTTCTTCTTCTCCAAC
CGCCTCGAAGTGGAAGAGCCAAACCTCATCAAGTTCTTCGGAACGCAATA
TATCGACTACGCAGCCTCCACTGCCTCCCTCCTCGGGTCTGGAATTCCAC
TCGTCCCAGGATCCAAGCAA
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