prot_M-pyrifera_M_contig126016.5250.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig126016.5250.1
Unique Name	prot_M-pyrifera_M_contig126016.5250.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	89

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig126016.5250.1 vs. uniprot
Match: A0A517PWL2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PWL2_9PLAN)

HSP 1 Score: 164 bits (415), Expect = 3.210e-51
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:    1 MLQEQPFDLFLKTLKKDLIRKYFIMGLFALVLLGQFIFNRELDPVSLAMLVLFTADANSEDRLIKALKLLKETSAPQPEPETVETVTS 88
            MLQEQPFDLFLKTLKKDLIRKYFIMGLFALVLLGQFIFNRELDPVSLAMLVLFTADANSEDRLIKALKLLKETSAPQPEPETVETVTS
Sbjct:    1 MLQEQPFDLFLKTLKKDLIRKYFIMGLFALVLLGQFIFNRELDPVSLAMLVLFTADANSEDRLIKALKLLKETSAPQPEPETVETVTS 88

[Close]

BLAST of mRNA_M-pyrifera_M_contig126016.5250.1 vs. uniprot
Match: A0A517QDM6_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QDM6_9PLAN)

HSP 1 Score: 61.6 bits (148), Expect = 1.480e-10
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0

Query:    1 MLQEQPFDLFLKTLKKDLIRKYFIMGLFALVLLGQFIFN-RELDPVSLAMLVLFTADANSEDRLIKALKLLKETSAPQPEPETVETVTS 88
            M Q+   D ++++LKK   R Y ++G+F + L+ Q IF  R  D   +    LF AD   +  LI  L+LLKETS PQ EPET+ETV S
Sbjct:    1 MSQKPTVDQYIESLKKGRKRNYILIGIFIISLMLQEIFTARGTDVFMVIFTTLFIADLICQGHLISVLELLKETSTPQTEPETMETVAS 89

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig126016.5250.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig126016.5250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A517PWL2_9PLAN	3.210e-51	100.00	Uncharacterized protein n=1 Tax=Gimesia chilikensi...	[more]
A0A517QDM6_9PLAN	1.480e-10	43.82	Uncharacterized protein n=2 Tax=Gimesia panareensi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 39..88
None	No IPR available	TMHMM	TMhelix		coord: 21..38

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig126016	contig	M-pyrifera_M_contig126016:166..432 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig126016.5250.1	mRNA_M-pyrifera_M_contig126016.5250.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig126016 166..432 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig126016.5250.1 ID=prot_M-pyrifera_M_contig126016.5250.1|Name=mRNA_M-pyrifera_M_contig126016.5250.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
MLQEQPFDLFLKTLKKDLIRKYFIMGLFALVLLGQFIFNRELDPVSLAML
VLFTADANSEDRLIKALKLLKETSAPQPEPETVETVTS*