mRNA_M-pyrifera_M_contig126010.5249.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A3D5DG28_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG28_9GAMM) HSP 1 Score: 184 bits (467), Expect = 5.420e-55 Identity = 93/106 (87.74%), Postives = 99/106 (93.40%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
H IINNILVGARPRAATFNRAGT+AYATSEISGEVKKVD++SG I GRMPLADD+AKPKDVLLN DE+KLFVAGGRAN IFVLD +TLEIQ SIPVGKRVWGLALS
Sbjct: 174 HKIINNILVGARPRAATFNRAGTIAYATSEISGEVKKVDLSSGTITGRMPLADDRAKPKDVLLNVDESKLFVAGGRANCIFVLDAHTLEIQQSIPVGKRVWGLALS 279
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A2E0PXZ1_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PXZ1_9GAMM) HSP 1 Score: 137 bits (345), Expect = 8.910e-37 Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
+TI NILVGARPRAATF ++G +AYAT+EISGEV K+D+ +G+I+ R D+K+KPKDV+LN DE+ ++VA GRAN + +D TLEI TSIPVGKRVWGLA+S
Sbjct: 169 NTIEKNILVGARPRAATFTKSGDIAYATAEISGEVVKIDMNTGEILKRGSSGDNKSKPKDVVLNKDESVVYVAAGRANKVVAMDAQTLEIITSIPVGKRVWGLAIS 274
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A2E0Q0C2_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0Q0C2_9GAMM) HSP 1 Score: 136 bits (343), Expect = 1.850e-36 Identity = 65/107 (60.75%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALSA 321
+ I +NIL+G+RPRAA F ++G +AYAT+EISGEV KVD+ + KI+ PL D+KAKPKDV+L+ DE ++VAGGRAN I V++ +TLEI IPVGKRVWGLA+S+
Sbjct: 170 NVIESNILIGSRPRAAVFTKSGDIAYATAEISGEVVKVDIPNAKILKTAPLGDNKAKPKDVILSKDEKTIYVAGGRANKIIVMNSDTLEILKGIPVGKRVWGLAMSS 276
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A836TZ31_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TZ31_9GAMM) HSP 1 Score: 132 bits (332), Expect = 7.620e-35 Identity = 65/105 (61.90%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLAL 315
+TI NNIL+G+RPRAATF+++G +AYAT+EISGEV KVD+ + KII D K+KPKDV+L+ DE ++VAGGRAN I V+D +TLEI IPVGKR WGLA+
Sbjct: 169 NTIENNILIGSRPRAATFSQSGDIAYATAEISGEVVKVDMINAKIIKTGSTGDSKSKPKDVVLSKDEKVIYVAGGRANKIIVMDADTLEIIKGIPVGKRTWGLAM 273
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A353VUN2_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A353VUN2_9GAMM) HSP 1 Score: 130 bits (328), Expect = 3.050e-34 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
+ I +NIL+G+RPRAA F ++G +AYAT+EISGEV KVD+ KI+ L D KAKPKDV+L DE ++VAGGRAN I V+D +TLEI IPVGKRVWGLA+S
Sbjct: 169 NVIESNILIGSRPRAAVFTKSGDIAYATAEISGEVVKVDMNKAKILKTASLGDAKAKPKDVILAKDEKTIYVAGGRANKIIVMDADTLEIIKGIPVGKRVWGLAMS 274
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A849MLC4_9PROT (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MLC4_9PROT) HSP 1 Score: 130 bits (328), Expect = 3.050e-34 Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 7 IINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
I NNILVG+RPRAATF ++G +AYAT+EISGEV KVD+ + KI+ D K+KPKDVLL+ DE ++VAGGRAN + V+D +TLEI IPVGKRVWGLA++
Sbjct: 172 IENNILVGSRPRAATFTQSGDIAYATAEISGEVVKVDMVNAKILKIGNTGDSKSKPKDVLLSKDEKVVYVAGGRANKVLVMDADTLEIIKGIPVGKRVWGLAMT 275
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A661BVN0_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BVN0_9GAMM) HSP 1 Score: 127 bits (320), Expect = 4.680e-33 Identity = 58/106 (54.72%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
+TI +NILVG+RPRAA F +AYAT+EI+GE+ K+D+ + KI+ R L D K+KPKDV+L+ DE ++VAGGR+N+++++D +TLE+ IPVGKRVWGLA++
Sbjct: 170 NTITDNILVGSRPRAAVFTNNSKIAYATAEITGEIVKIDMENAKILKRSQLEDPKSKPKDVILSKDEKHIYVAGGRSNSVWLMDADTLEVIKGIPVGKRVWGLAIT 275
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A482ZZX5_9GAMM (Uncharacterized conserved protein n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=A0A482ZZX5_9GAMM) HSP 1 Score: 124 bits (310), Expect = 1.690e-31 Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLA 312
+T+I+NILVG+RPRAA FNR L YAT+EISGEV K+D I+ R+ L D +KPKD+LL+ DE L+VAGGRAN I++++ +TLE+ I VGKRVWGLA
Sbjct: 179 NTVIDNILVGSRPRAAIFNRNNQLIYATTEISGEVIKIDAEQATILQRIQLKDPNSKPKDILLSKDEKFLYVAGGRANKIWLMNADTLEVIKGISVGKRVWGLA 282
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A523P5J0_9PROT (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P5J0_9PROT) HSP 1 Score: 105 bits (263), Expect = 1.590e-24 Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 1
Query: 136 IGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLAL 315
IG+MPLADDKAKPKD+LLN DET LFVAGGRAN +FVLD NTLE+ SIPVGKRVWGLAL
Sbjct: 219 IGKMPLADDKAKPKDILLNKDETLLFVAGGRANRVFVLDANTLELYKSIPVGKRVWGLAL 278
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Match: A0A1G0K0X5_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K0X5_9GAMM) HSP 1 Score: 103 bits (256), Expect = 1.180e-23 Identity = 55/106 (51.89%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPLADDKAKPKDVLLNNDETKLFVAGGRANAIFVLDPNTLEIQTSIPVGKRVWGLALS 318
H I+ NIL EISGEVKKVD+ + KII +AD+KAKPKDV+L+ DE L+VAGGR++A+ VLD TL+I+ +IPVGKRVWGLA S
Sbjct: 169 HDIVANILXXXXXXXXXXXXXXXXXXXXXEISGEVKKVDMRANKIIAVEKIADEKAKPKDVMLSADEKTLYVAGGRSDAVIVLDAATLKIKATIPVGKRVWGLARS 274 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126010.5249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126010.5249.1 >prot_M-pyrifera_M_contig126010.5249.1 ID=prot_M-pyrifera_M_contig126010.5249.1|Name=mRNA_M-pyrifera_M_contig126010.5249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp HTIINNILVGARPRAATFNRAGTLAYATSEISGEVKKVDVASGKIIGRMPback to top mRNA from alignment at M-pyrifera_M_contig126010:3..452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126010.5249.1 ID=mRNA_M-pyrifera_M_contig126010.5249.1|Name=mRNA_M-pyrifera_M_contig126010.5249.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig126010:3..452+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126010:3..452+ >mRNA_M-pyrifera_M_contig126010.5249.1 ID=mRNA_M-pyrifera_M_contig126010.5249.1|Name=mRNA_M-pyrifera_M_contig126010.5249.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig126010:3..452+ (Macrocystis pyrifera P11B4 male)back to top |