prot_M-pyrifera_M_contig125992.5247.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125992.5247.1
Unique Nameprot_M-pyrifera_M_contig125992.5247.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig125992.5247.1 vs. uniprot
Match: L8GIC1_ACACA (NlpC/P60 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIC1_ACACA)

HSP 1 Score: 72.4 bits (176), Expect = 1.460e-12
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0 
Query:    1 VSYAYDALQLTQLVYNEVVVVYEEGVVGADGQLWSYVGALEQLTIINGSYVPYPGYILASQLVDFVAHAPTGPLYLVEADYVPVYGRECHMVGCLPDDMVALAPMGSGLDGVIGDDGWLQFTQPGGT 127
            VSY  D  QL+Q ++ E + + E    G +   W    A  Q  + +G +VPY  Y+  S LV  VA  P+  L +V  +   VYGRECH+ GCLP D+     + + L+G+   DGW +   P GT
Sbjct:    4 VSYEIDENQLSQALFYESIYMLE----GTESDGWVMTEAPMQPNLASGEWVPYRSYMNKSHLVP-VASFPSYNLVVVN-NVAEVYGRECHLTGCLPSDVKLEVVVATFLEGISHSDGWWKIRMPFGT 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125992.5247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
L8GIC1_ACACA1.460e-1236.22NlpC/P60 domain containing protein n=1 Tax=Acantha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125992contigM-pyrifera_M_contig125992:102..482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125992.5247.1mRNA_M-pyrifera_M_contig125992.5247.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125992 102..482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125992.5247.1 ID=prot_M-pyrifera_M_contig125992.5247.1|Name=mRNA_M-pyrifera_M_contig125992.5247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
VSYAYDALQLTQLVYNEVVVVYEEGVVGADGQLWSYVGALEQLTIINGSY
VPYPGYILASQLVDFVAHAPTGPLYLVEADYVPVYGRECHMVGCLPDDMV
ALAPMGSGLDGVIGDDGWLQFTQPGGT
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