mRNA_M-pyrifera_M_contig12582.5229.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: D8LKL2_ECTSI (Tubulin-specific chaperone A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL2_ECTSI) HSP 1 Score: 135 bits (339), Expect = 1.480e-36 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLV 258
RM+KEV+ YE EAK+NEAKVQ+MRDDGKD YDIRKQEEVLQESYMMIPDSK RLAK ED+E FLGEHA EGLP+DQLEEAK L+
Sbjct: 17 RMVKEVASYEVEAKENEAKVQKMRDDGKDAYDIRKQEEVLQESYMMIPDSKSRLAKALEDMEGFLGEHAGAEGLPTDQLEEAKGLL 102
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A6V2H5K8_9STRA (Tubulin-specific chaperone A n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2H5K8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.270e-19 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLV 258
R+ KE YEKE K+NE K+ +M+ DG+DPYDI+K EEVL ESYMM+PDSK RL K EDL FL +++ S+ + EAKS+V
Sbjct: 20 RLAKEAGYYEKEVKENEGKLAKMKADGRDPYDIKKFEEVLGESYMMVPDSKARLKKALEDLSLFLKNNSNVLDPESESMSEAKSIV 105
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A6U3QVJ1_9STRA (Tubulin-specific chaperone A n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QVJ1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.640e-19 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLV 258
R+ KE YEKE K+NE K+ +M+ DG+DPYDI+K EEVL ESYMM+PDSK RL K EDL FL +++ S+ + EAKS+V
Sbjct: 24 RLAKEAGYYEKEVKENEGKLAKMKADGRDPYDIKKFEEVLGESYMMVPDSKARLKKALEDLSLFLKNNSNVLDPESESMSEAKSIV 109
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A7S2W3S2_9STRA (Tubulin-specific chaperone A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3S2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.590e-18 Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLP-SDQLEEAKSLV 258
RM KEV+ Y +EA++NEA+VQ+ +D GKD +D++K EEVL+ESYMMIPDSK RL K EDL F+ EH EG+ ++QLE A ++
Sbjct: 25 RMAKEVAFYHREAEENEARVQKFKDAGKDIHDVKKAEEVLEESYMMIPDSKNRLQKAVEDLLVFVEEHRKEEGVAGTEQLEAALQVL 111
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A8J9X6S7_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6S7_PHATR) HSP 1 Score: 79.0 bits (193), Expect = 1.840e-15 Identity = 38/67 (56.72%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGE 201
R+LKEV+ Y+KE ++NE K+Q+M+DD +DPYD++K EVL ESYMM+PDS+ RLA+ +L FL E
Sbjct: 1 RLLKEVNYYQKEVQENEVKLQQMKDDNRDPYDVKKFAEVLDESYMMVPDSEARLAQAVHELRDFLEE 67
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: K8Z7U7_NANGC (Tubulin-specific chaperone A n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7U7_NANGC) HSP 1 Score: 79.3 bits (194), Expect = 5.980e-15 Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLVEAS 267
R++KE + YEKEA E K+ MR +G+D YDI+KQEEVLQESYMMIPDSK RL E L AFL T+ +++E+ EA+
Sbjct: 28 RLIKEAASYEKEAAAQEQKIAGMRTEGRDTYDIKKQEEVLQESYMMIPDSKSRLQAALEHLAAFL-----TQSRDVKEVQESDVYAEAN 111
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A835YMR5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.590e-14 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLP-SDQLEEAKSLVEA 264
R+ KEV+ YEKEA NEAKV+ M+D+G+D +D+RK EE+L ES MMIPDSK RL E+L L EG+ +D +AK+LVEA
Sbjct: 15 RLAKEVASYEKEASTNEAKVRAMKDEGRDAHDVRKAEEILAESCMMIPDSKSRLQVAVEELAGMLAASEGEEGVKDTDDYADAKALVEA 103
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: UPI00143DD2F3 (tubulin-specific chaperone A-like n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143DD2F3) HSP 1 Score: 74.3 bits (181), Expect = 3.510e-13 Identity = 45/89 (50.56%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLVEAS 267
R+ KE YEKEA+ +VQ+ +D+GKD Y+IRKQEEVLQES MM+PD + RLAK EDL+ L + + + LE K L EAS
Sbjct: 18 RLAKEKITYEKEAEQQRERVQKFKDEGKDGYEIRKQEEVLQESLMMVPDCQRRLAKAHEDLKKILETEQDLKEVEA-YLEAEKVLEEAS 105
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: A0A0K8TUG7_TABBR (Tubulin-specific chaperone A n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TUG7_TABBR) HSP 1 Score: 73.9 bits (180), Expect = 4.190e-13 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLVEAS 267
R+ KE S YEKEA+ +++V++ + DGKD +DIRKQEEVL+ES MM+PD + RLAK E+L FL ++L+E K EA+
Sbjct: 18 RLAKEKSVYEKEAETQKSRVEKYKSDGKDVHDIRKQEEVLKESLMMVPDCQRRLAKAVEELNEFLKSE--------EELKETKEYAEAT 98
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Match: UPI000625ACE0 (tubulin-specific chaperone A n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI000625ACE0) HSP 1 Score: 73.9 bits (180), Expect = 5.270e-13 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 1 RMLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKGRLAKVFEDLEAFLGEHAHTEGLPSDQLEEAKSLVEASTA*ASQG 288
R+ KE YEKEA ++Q+++D GKD YDIRKQEEVLQES MM+PD + RL K FE+L+ L + + + +E K +V+A QG
Sbjct: 18 RLAKEKITYEKEAAQQRDRIQKLKDQGKDEYDIRKQEEVLQESLMMVPDCQRRLVKAFEELKKILESEQDLKEVEA-YVEAEKVIVDAQLQLPQQG 112 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12582.5229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12582.5229.1 >prot_M-pyrifera_M_contig12582.5229.1 ID=prot_M-pyrifera_M_contig12582.5229.1|Name=mRNA_M-pyrifera_M_contig12582.5229.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp MLKEVSGYEKEAKDNEAKVQEMRDDGKDPYDIRKQEEVLQESYMMIPDSKback to top mRNA from alignment at M-pyrifera_M_contig12582:4133..5157- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12582.5229.1 ID=mRNA_M-pyrifera_M_contig12582.5229.1|Name=mRNA_M-pyrifera_M_contig12582.5229.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1025bp|location=Sequence derived from alignment at M-pyrifera_M_contig12582:4133..5157- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12582:4133..5157- >mRNA_M-pyrifera_M_contig12582.5229.1 ID=mRNA_M-pyrifera_M_contig12582.5229.1|Name=mRNA_M-pyrifera_M_contig12582.5229.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig12582:4133..5157- (Macrocystis pyrifera P11B4 male)back to top |