prot_M-pyrifera_M_contig125816.5227.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125816.5227.1
Unique Nameprot_M-pyrifera_M_contig125816.5227.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length60
Homology
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: UPI0018857A95 (E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018857A95)

HSP 1 Score: 61.6 bits (148), Expect = 3.790e-10
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    7 EGICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRRDVD 58
            +  CPICLA    + +ET+C HLFC++C+  Y+ H    NP++CPVCR+ ++
Sbjct:   23 DSACPICLAGL-SHVVETNCAHLFCADCFFAYYGHGSPLNPMKCPVCRQQLN 73          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A1X7UBE4_AMPQE (E3 ubiquitin-protein ligase RNF170 n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UBE4_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 2.100e-8
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0
Query:   10 CPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRRDVDLI 60
            CP+CL  P     ET+C H FC++C   YW     P   RCPVCRR+V+++
Sbjct:   85 CPVCLG-PITYLAETNCGHRFCAQCILMYWRTDRWPRACRCPVCRREVNIL 134          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A0R3RQC1_9BILA (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RQC1_9BILA)

HSP 1 Score: 56.6 bits (135), Expect = 7.150e-8
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    9 ICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRP-NPVRCPVCRRDVDLI 60
            ICPIC ++     + T+C HLFC  C  GYW+++     PV+C VCR +V+L+
Sbjct:  129 ICPICFSQA-SFAVVTNCGHLFCCSCIYGYWQYSASLITPVKCAVCRENVNLL 180          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A1Y1IDF0_KLENI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDF0_KLENI)

HSP 1 Score: 53.9 bits (128), Expect = 5.130e-7
Identity = 19/52 (36.54%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    9 ICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRRDVDLI 60
            +C IC  +    P + +C H FC +C    W+H+   +P RCP+CRR+++L+
Sbjct:   74 MCSICH-DQFTMPCQANCSHWFCGDCILRAWQHSSALSPCRCPICRRNINLL 124          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A6A6FGS1_9PEZI (RING-type domain-containing protein n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6FGS1_9PEZI)

HSP 1 Score: 51.6 bits (122), Expect = 5.830e-7
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
Query:    1 RAEADGEG-ICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRR 55
            + + +G G  CP+CL  P  +P+ET CRHLFCS C   ++E        RCP CRR
Sbjct:   19 KPDQEGYGQTCPVCLF-PFSSPVETVCRHLFCSVCAQRWFE-----GHNRCPTCRR 68          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A8H8RGJ2_9HELO (ATP-dependent RNA helicase-like protein (Fragment) n=1 Tax=Lachnellula occidentalis TaxID=215460 RepID=A0A8H8RGJ2_9HELO)

HSP 1 Score: 51.6 bits (122), Expect = 4.510e-6
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0
Query:    3 EADGEGICPICLA-EPPENPIETSCRHLFCSECYSGYWEHTFRPNP----VRCP----VCRRDVDL 59
            E   EG CPICLA +  E P+ETSC+H +C EC+ G  +H    +     ++C      CR+  DL
Sbjct:  499 EHKSEGECPICLATDDIEIPVETSCKHTYCLECFEGCCKHAASTSTNQFQIKCAGDGGECRKVFDL 564          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A6P7LGB5_BETSP (NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7LGB5_BETSP)

HSP 1 Score: 51.2 bits (121), Expect = 6.210e-6
Identity = 19/54 (35.19%), Postives = 31/54 (57.41%), Query Frame = 0
Query:    2 AEADGEGICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRR 55
            A+   E +C +C  E  ++P+ TSC+H FC +C + YW+ +       CP CR+
Sbjct:   85 ADTKEEQLCALC-EEVLKDPVSTSCKHTFCRQCITVYWDQSRSAGDSSCPHCRK 137          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: A0A1R3RFI5_ASPC5 (Uncharacterized protein n=1 Tax=Aspergillus carbonarius (strain ITEM 5010) TaxID=602072 RepID=A0A1R3RFI5_ASPC5)

HSP 1 Score: 50.1 bits (118), Expect = 1.590e-5
Identity = 24/51 (47.06%), Postives = 31/51 (60.78%), Query Frame = 0
Query:   10 CPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRRDVDLI 60
            CP C   P  NP+ TSC+HL+C ECY  Y+  T +   +  PVCRR +D I
Sbjct:  819 CPTCEFVPV-NPVITSCKHLYCEECY--YFLLTDKSTTLGKPVCRRCLDTI 866          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: UPI0018EC5225 (protein NLRC3-like isoform X1 n=2 Tax=Micropterus salmoides TaxID=27706 RepID=UPI0018EC5225)

HSP 1 Score: 49.7 bits (117), Expect = 2.170e-5
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = 0
Query:   10 CPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVC 53
            C +C  +  ++P+ TSCRH FC +C + YW+ +  P    CP C
Sbjct:   56 CALCQ-DVLKDPVSTSCRHWFCRQCITSYWDQSASPGDSSCPQC 98          
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Match: UPI001863B851 (NACHT, LRR and PYD domains-containing protein 14-like isoform X1 n=2 Tax=Colossoma macropomum TaxID=42526 RepID=UPI001863B851)

HSP 1 Score: 49.3 bits (116), Expect = 2.990e-5
Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 0
Query:   20 NPIETSCRHLFCSECYSGYWEHTFRPNPVRCPVCRR 55
            +P+  SCRH FC +C S YW+H  +     CP CR+
Sbjct:  213 DPVSISCRHSFCRQCISSYWDHLAQSEDFVCPQCRK 248          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125816.5227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
UPI0018857A953.790e-1044.23E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Po... [more]
A0A1X7UBE4_AMPQE2.100e-845.10E3 ubiquitin-protein ligase RNF170 n=2 Tax=Amphime... [more]
A0A0R3RQC1_9BILA7.150e-843.40E3 ubiquitin-protein ligase RNF170 n=1 Tax=Elaeoph... [more]
A0A1Y1IDF0_KLENI5.130e-736.54E3 ubiquitin-protein ligase RNF170 n=1 Tax=Klebsor... [more]
A0A6A6FGS1_9PEZI5.830e-744.64RING-type domain-containing protein n=1 Tax=Cercos... [more]
A0A8H8RGJ2_9HELO4.510e-639.39ATP-dependent RNA helicase-like protein (Fragment)... [more]
A0A6P7LGB5_BETSP6.210e-635.19NACHT, LRR and PYD domains-containing protein 12-l... [more]
A0A1R3RFI5_ASPC51.590e-547.06Uncharacterized protein n=1 Tax=Aspergillus carbon... [more]
UPI0018EC52252.170e-538.64protein NLRC3-like isoform X1 n=2 Tax=Micropterus ... [more]
UPI001863B8512.990e-544.44NACHT, LRR and PYD domains-containing protein 14-l... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 10..53
e-value: 3.3E-6
score: 36.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 10..54
score: 11.973
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..60
e-value: 1.7E-13
score: 51.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 8..58
e-value: 7.4E-10
score: 38.5
NoneNo IPR availablePANTHERPTHR22894UNCHARACTERIZEDcoord: 6..59
NoneNo IPR availablePANTHERPTHR22894:SF5E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE PROTEIN (DUF 1232)coord: 6..59
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..59
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 26..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125816contigM-pyrifera_M_contig125816:292..471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125816.5227.1mRNA_M-pyrifera_M_contig125816.5227.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125816 292..471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125816.5227.1 ID=prot_M-pyrifera_M_contig125816.5227.1|Name=mRNA_M-pyrifera_M_contig125816.5227.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp
RAEADGEGICPICLAEPPENPIETSCRHLFCSECYSGYWEHTFRPNPVRC
PVCRRDVDLI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS