mRNA_M-pyrifera_M_contig125798.5220.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7Y5CCW4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CCW4_9BACT) HSP 1 Score: 119 bits (298), Expect = 4.910e-29 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 1 ILDPEFQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFGFNN-GGVVTNNDT-QSIN--VNRVSPGQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
ILDP+F+G+RV+ VLDYLD T +L ILARPRVTVQDGEEA F+ T + FQS GF GG V +N T +N +RV PGQ++F++VG +LKV PR+N+ IL++IE E+S
Sbjct: 438 ILDPDFKGNRVAVVLDYLDSTGELTILARPRVTVQDGEEATFENTTDQPFQSVGFTGYGGTVIDNGTGDPVNDVSSRVIPGQVQFIKVGTILKVKPRVNDESNILMDIETEES 550
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7V2X796_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2X796_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 2.040e-15 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFGFNNGG---VVTNNDTQSINVNRVSP-------------GQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
+ G+R++AVLDYLD+ + + I+A PRVTVQDGEEAVF+ + + S GG T + T N +P +++F++VG +L V PRI+E G IL++IEAEDS
Sbjct: 170 YAGNRLTAVLDYLDKQNKVTIIASPRVTVQDGEEAVFENATRVPYVSASTYYGGGGYYPTRSQTGDGTNNNTTPYYPYYSGYGLNNTNRVDFIDVGTILSVYPRISEDGTILMDIEAEDS 289
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7Z9HW62_9BACT (Type II and III secretion system protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9HW62_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 6.640e-14 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 19 QGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFGFNNGGVVTNNDTQSINVNRVSPGQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
Q +SA+L+ L+ + + + A+PR++V DGEEAVF T Q F + D S N N V+ +++F++VG +L+VLPRI + GK+++EI +EDS
Sbjct: 72 QDGDISALLEILETSGEASVNAQPRISVIDGEEAVFANTTQVPFATSSIR--------DNNSFNQNTVTSTRVDFIDVGTILRVLPRITQDGKVIMEISSEDS 166
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7V3DGE2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DGE2_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 2.290e-13 Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 13 EFQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAF-------QSFGFNNGGVVTNNDTQSINVNRVSP--------GQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
+F G+RV AVL+YLD ++ ++A PRVTVQDGEEA+FQ ++ + S+ + G + + N S +I+F+EVG +L VLPRI E ILL+I AEDS
Sbjct: 574 KFSGNRVGAVLNYLDTRNEAKVIAAPRVTVQDGEEAIFQSGRRVPYVTSTTYGSSYPYAYAGNIPGTAGATANPYYNSYYGYGSQPYNRIDFIEVGTILNVLPRITEDNSILLDISAEDS 693
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A847GB22_9BACT (Secretin_N domain-containing protein (Fragment) n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GB22_9BACT) HSP 1 Score: 72.4 bits (176), Expect = 1.460e-12 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQS-------FGFNNGGVVTNNDTQSINVNRVSPGQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
+ G++++ LDYLD+ + IL+ PRVTVQDGEEA+F+ + + S + GG V +N + VN + ++EF++VG +L V P I E ILL+I AEDS
Sbjct: 514 YAGNKLALALDYLDKQNKATILSSPRVTVQDGEEAMFENATRVPYVSASTYYGGYXXXXGGGVNDNYNRYSGVNNTN--RVEFIDVGTILTVYPVITEDENILLDISAEDS 622
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A1V6EZQ7_9BACT (Putative type II secretion system protein D n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EZQ7_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 2.760e-12 Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFGFNNGGVVTN--------NDTQSINVNRVSPG--QIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
+ G ++ LDYLD + +L+ PRVTVQDGEEA+F+ + + S + GG NDT N R + G ++EF++VG +L VLPR+ E ILL+I AEDS
Sbjct: 648 YVGRNLAVTLDYLDSKKKVTVLSSPRVTVQDGEEAIFENATKVPYVS---STGGYXXXXXXXXXXXNDTDD-NYRRYNTGTSRVEFIDVGTILSVLPRVTEDDTILLDISAEDS 757
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A2A5E434_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5E434_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 2.400e-11 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 31 VSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFGFNNGGVVTNNDTQSINVNRVSPGQI--EFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
+ ++L +L+ + D ILA PR+TVQDGE A F+ T Q F N+ T +N N S + +F++VG +L+V+PRI E G IL++I AEDS
Sbjct: 461 LGSMLSFLETSGDATILAHPRITVQDGELARFENTTQVPF-----------ANSTTNFLNSNNNSTSTVSFQFIDVGTILEVVPRIAEEGNILMDISAEDS 550
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A1V5YWS0_9BACT (Putative type II secretion system protein D n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YWS0_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 8.460e-11 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQSFG------FNNGGVVTNNDTQSINVNR---VSPGQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
++G ++ LDYLD IL+ P+VTVQDGEEA+F+ + + S G N + +++ R S ++EF++VG +L VLPR+ + ILL+I AEDS
Sbjct: 660 YRGGNLAVTLDYLDSQHKATILSSPKVTVQDGEEALFENATKVPYVSASGGYXXXXXXSGYPGGNTSDNLDYYRRMSSSGSRVEFIDVGTILSVLPRVTDDQNILLDISAEDS 772
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7C3STR6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3STR6_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 2.600e-9 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFQS----------FGFNNGGVVTNNDTQ--------------SINVNRVSPGQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
F G+ +S L+YLD+ + IL+ PRV VQDGEEA+F+ + + S + + TN ++Q ++EF++VG +L V+PRI E ILL+I AEDS
Sbjct: 662 FLGNNLSVALNYLDRQNKATILSSPRVVVQDGEEAIFENATRVPYISGTAGGYSPYTYSYRQTTTGTNTNSQYNXXXXXXXXXXXXXXXXXXXGYNRVEFIDVGTILSVVPRITEDNSILLDISAEDS 789
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Match: A0A7C4UVY6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4UVY6_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 5.140e-7 Identity = 41/126 (32.54%), Postives = 59/126 (46.83%), Query Frame = 1
Query: 16 FQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAF--------QSFGFNNGGVVTNNDTQSINVNRVSP--------------GQIEFVEVGVVLKVLPRINEAGKILLEIEAEDS 327
F G ++ L+YLD+ + ILA PRV VQDGEEA F+ + + S+ + TN ++EF++VG +L V+PRI+E ILL+I AEDS
Sbjct: 650 FIGTNLAVALNYLDKQNKATILASPRVVVQDGEEATFENATRVPYISGTAGYPPSYYYPRTQTGTNXXXXXXXXXXXXXXXXXXXXXXXXGGYNRVEFIDVGTILSVVPRISEDNTILLDISAEDS 775 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125798.5220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125798.5220.1 >prot_M-pyrifera_M_contig125798.5220.1 ID=prot_M-pyrifera_M_contig125798.5220.1|Name=mRNA_M-pyrifera_M_contig125798.5220.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp ILDPEFQGDRVSAVLDYLDQTDDLDILARPRVTVQDGEEAVFQRTQQRAFback to top mRNA from alignment at M-pyrifera_M_contig125798:2..328- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125798.5220.1 ID=mRNA_M-pyrifera_M_contig125798.5220.1|Name=mRNA_M-pyrifera_M_contig125798.5220.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig125798:2..328- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125798:2..328- >mRNA_M-pyrifera_M_contig125798.5220.1 ID=mRNA_M-pyrifera_M_contig125798.5220.1|Name=mRNA_M-pyrifera_M_contig125798.5220.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig125798:2..328- (Macrocystis pyrifera P11B4 male)back to top |