mRNA_M-pyrifera_M_contig125783.5214.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A7K1ZBZ7_9ACTN (DUF222 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBZ7_9ACTN) HSP 1 Score: 172 bits (435), Expect = 4.810e-49 Identity = 99/180 (55.00%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQAL------------------------ARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
RE HAS T + R+D WLDPIG E FR AL RIE E F D + A+ H T + LWRTPAQRRADALVEMA RA+ K P PLVIIH+D TFE+ L A RLCET G VI+PTQ +EQAL GH+RRLVYE+PGV+LDYGRS RLFTGA
Sbjct: 187 REFHASMTFDGMGRLDGWLDPIGFEEFRNALERIEAELFNNDLKDAQADHIDRHTAE-LWRTPAQRRADALVEMARRATAVPEGAKTPEPLVIIHMDKPTFEEGLNGTLGLNLFNHEPAQADRGPLSAEAGRLCETDSGAVITPTQAVEQALRGHIRRLVYESPGVILDYGRSTRLFTGA 365
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A7X5WUQ2_9ACTN (DUF222 domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WUQ2_9ACTN) HSP 1 Score: 158 bits (399), Expect = 8.770e-45 Identity = 84/140 (60.00%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALAR--------------RLCETADGTVISPTQMIEQ 378
RE H SKT+ + RVD WLDPIG F ALRRIE E F+ADW+ AK+ HG+AVTVDRLWRTP QRRADALVEMA RA GKRP PLVI+H D T E AL R R CE DGTV+SPTQM+EQ
Sbjct: 173 RELHVSKTIGGMGRVDGWLDPIGHATFSEALRRIERELFDADWEQAKKEHGAAVTVDRLWRTPPQRRADALVEMAERAVAAPPDGKRPLPLVIVHTDPATMETALRRLAGGEHVEVDPTAERTCELDDGTVVSPTQMLEQ 312
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A2N5JVI2_9ACTN (HNHc domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JVI2_9ACTN) HSP 1 Score: 115 bits (289), Expect = 6.170e-28 Identity = 65/156 (41.67%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
R+ H S++ + D LDPI G LRRIE E FE DW A++ G V L RTPAQRRADA+VEMA R+ T G+RP PL + V +T LA R+CE A+GTV++P +++ + R+V++ P ++D G ++R+F GA
Sbjct: 172 RKMHLSQSFGGMWFGDLVLDPISGAVVDNELRRIERELFEVDWAEARERLGDRAGVGDLARTPAQRRADAVVEMARRSGTAPADGRRPEPLFSVFVGFET----LAGRICELANGTVVNPGSLVDWLDEAWIERIVFDGPSRVIDVGVARRIFAGA 323
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A6N7FPW2_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FPW2_9ACTN) HSP 1 Score: 116 bits (290), Expect = 3.230e-27 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTG 465
R+ H S++L + D LDP+GG A L IE E F ADW AK G +VTV L RTP QRRADALVEMA RA G+RPAPL +HV +TF A R+CE A+G V++P ++ + R+V+ P ++D G R F G
Sbjct: 469 RQMHLSQSLDGMWLGDLVLDPLGGAAVAETLALIEEELFAADWAEAKTRVGDSVTVADLGRTPPQRRADALVEMAVRARAAPPGGRRPAPLFTVHVGYETF----AGRVCELANGAVVAPGALVPWLDGADIERVVFAGPSRVIDVGAHTRFFVG 619
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A5Q2RHD9_9ACTN (DUF222 domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RHD9_9ACTN) HSP 1 Score: 112 bits (281), Expect = 1.260e-26 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTG 465
R AH S L + +D DP+G F ALRRIEHE +EADW A+ G+A + L R+ A RR DAL+EMA RAS + P PLV +HVD +T L R+CE + G V++P +++ V R V+ G ++D GR RLF G
Sbjct: 177 RSAHLSPGLDGVGHLDVTFDPVGYTEFAEALRRIEHELWEADWADARDRLGNAASSADLARSTAPRRYDALIEMARRASAAPPGARAPRPLVTVHVDHET----LTGRICELSTGRVVTPGEVLPLLAAADVERAVFGPEGRVIDLGRRSRLFVG 327
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A538JUW2_9ACTN (DUF222 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JUW2_9ACTN) HSP 1 Score: 108 bits (270), Expect = 3.280e-25 Identity = 65/156 (41.67%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
R H S+ +D DP+GG AL RIE + F+ADW A+ G V L RTPAQRRADA+VEMA RA + P PLV + V +TF A R+CE A+GTV+SP ++ V R+V++ P + + G +RLFTGA
Sbjct: 169 RRLHLSQGFGGTWVLDGVFDPVGGAVPEGALGRIEADLFQADWAEARARAGEGVCAADLARTPAQRRADAMVEMARRAGATPPGARLPEPLVTVLVGYETF----AGRICELANGTVLSPGSLLRLLERAWVERVVFDGPDRIKNIGVRRRLFTGA 320
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A538JRI1_9ACTN (DUF222 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JRI1_9ACTN) HSP 1 Score: 107 bits (268), Expect = 6.360e-25 Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 1
Query: 1 REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
R H S++ +D DPIGG L IEHE FEADW A+ G+ V L R PAQRRADA VEMA RA + P PL + V +TF A R+CE A+GTV++P ++ G V R+V++ P + + G +R+FTGA
Sbjct: 169 RRLHLSQSFGGGWVLDGTFDPIGGAVLHRTLAGIEHELFEADWAEARARVGAGVCAADLVRAPAQRRADAAVEMARRARAVPPGARLPEPLFTVFVGYETF----AGRICELAEGTVVTPGSLVGWLEDGWVERVVFDGPDRVRNLGSRRRIFTGA 320
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A7V9J6I2_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9J6I2_9ACTN) HSP 1 Score: 102 bits (255), Expect = 1.280e-24 Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 88 ALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
AL RI E FEADW A+ G T L R+PAQRRADALVEMA RA + G+RP PL + V +TF A R+C+ A+G+V+SP ++ V R+V+E+P ++D G ++RLF+GA
Sbjct: 4 ALERIVDELFEADWAEARARLGEEATTADLARSPAQRRADALVEMARRAGSAPADGRRPEPLFTVLVGYETF----AGRICQLANGSVVSPGSLVPWLDSAWVERVVFESPSRVIDVGVARRLFSGA 126
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A349B5C4_9ACTN (DUF222 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B5C4_9ACTN) HSP 1 Score: 104 bits (259), Expect = 2.390e-23 Identity = 65/159 (40.88%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 40 RVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALAR----------------RLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
R++A + G R E ADW A++ HG V+ L RTPAQRRADA+ + RA+ A G P PLV I VD +TFE L R R C T DGT I P + + AL+GHVRR+V ++ G ++D GR QRLFTG+
Sbjct: 198 RLEANHGGLQGAVMAEIFERFETAELYADWAAAREVHGEDARVEHLDRTPAQRRADAMFRIFCRAA--AADGCSPEPLVNIVVDLETFEDELRRSAGVDVRVDPNEVLDDRRCHTLDGTQIRPAEAVAAALVGHVRRVVVDSAGTVIDLGRRQRLFTGS 354
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Match: A0A6I2WSC9_9ACTN (DUF222 domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A6I2WSC9_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 4.560e-20 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 1
Query: 10 HASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHGSAVTVDRLWRTPAQRRADALVEMAHRASTNARTGKRPAPLVIIHVDTDTFEQALARRLCETADGTVISPTQMIEQALLGHVRRLVYEAPGVLLDYGRSQRLFTGA 468
+AS +L + ++ LDPIGG ALRRIEHE + AD + + RTPAQRRA ALVEMAHR+ G+ P PL + V T +Q LCE A+GTVI P++++E + ++++ P +L R +R FTGA
Sbjct: 179 YASSSLDGMVVLNGQLDPIGGAIVTEALRRIEHELYLADLKSGTR------------RTPAQRRAQALVEMAHRSQAAPPNGRMPKPLFTVVVGDHTAQQ-----LCELANGTVIRPSELVEYFSAAMLETVLFDGPSTVLSVSR-RRSFTGA 313 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125783.5214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125783.5214.1 >prot_M-pyrifera_M_contig125783.5214.1 ID=prot_M-pyrifera_M_contig125783.5214.1|Name=mRNA_M-pyrifera_M_contig125783.5214.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp REAHASKTLFDLTRVDAWLDPIGGEAFRVALRRIEHEFFEADWQLAKQTHback to top mRNA from alignment at M-pyrifera_M_contig125783:6..512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125783.5214.1 ID=mRNA_M-pyrifera_M_contig125783.5214.1|Name=mRNA_M-pyrifera_M_contig125783.5214.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig125783:6..512- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125783:6..512- >mRNA_M-pyrifera_M_contig125783.5214.1 ID=mRNA_M-pyrifera_M_contig125783.5214.1|Name=mRNA_M-pyrifera_M_contig125783.5214.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig125783:6..512- (Macrocystis pyrifera P11B4 male)back to top |