prot_M-pyrifera_M_contig125778.5213.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125778.5213.1
Unique Nameprot_M-pyrifera_M_contig125778.5213.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001593D9C9 (ATP-binding protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593D9C9)

HSP 1 Score: 330 bits (847), Expect = 1.050e-111
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER
Sbjct:    5 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A2G2D9A1_9SPHN (Histidine kinase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A2G2D9A1_9SPHN)

HSP 1 Score: 264 bits (675), Expect = 1.280e-85
Identity = 130/170 (76.47%), Postives = 156/170 (91.76%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PSGEQILAGL++A++++D+G LITR+NP+GEALFGTSAK+L+GR++DD LQFSD RL AAL  PD SLTAR VMV+S++RKLGIVDFDIHPLAS S+WRLISL+++PQDGPILE+EN DPS+LAIRAPDILSHEIKNPLAAIRGAAQLLDR ++++QK LTQMI  EVER
Sbjct:    5 PSGEQILAGLSHALIILDTGHLITRVNPSGEALFGTSAKNLLGRRIDDVLQFSDARLQAALTEPDISLTARSVMVTSEDRKLGIVDFDIHPLASDSEWRLISLSVLPQDGPILENENPDPSDLAIRAPDILSHEIKNPLAAIRGAAQLLDRNLDESQKPLTQMITAEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A127MF26_9SPHN (Histidine kinase n=5 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A127MF26_9SPHN)

HSP 1 Score: 254 bits (650), Expect = 7.770e-82
Identity = 128/170 (75.29%), Postives = 149/170 (87.65%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            P  +QILAGL+ A++VVDS   + R+NPAGEALFGTSAKHL+GRK++  L FSD RL+AAL   + SLTARGV+V SD+RKLGIVDFDIHPLAS + WRLISL+LMPQDGPILE+EN+DPSNLAIRAPDILSHEIKNPLAAI+GAAQLLDRQ+++TQK LTQMI  EVER
Sbjct:    5 PPADQILAGLSLALLVVDSDHNVARVNPAGEALFGTSAKHLVGRKINHVLHFSDARLDAALTEQEISLTARGVIVFSDDRKLGIVDFDIHPLASNAKWRLISLSLMPQDGPILENENNDPSNLAIRAPDILSHEIKNPLAAIKGAAQLLDRQLDETQKPLTQMITAEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A1B6Z5K8_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z5K8_9SPHN)

HSP 1 Score: 201 bits (510), Expect = 1.050e-60
Identity = 103/170 (60.59%), Postives = 125/170 (73.53%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PS +QI AGLN A+++VDSG  I RINPAGEAL GTS KHLIGR + + L+F+DPRL +AL  P+ +L AR V V    R LG VDFDIH L +   WR++SL  + Q+GP   ++  D S  ++RAPDILSHEIKNPLAAI GAAQLLDRQ+N+ QK LTQMI  EVER
Sbjct:    5 PSADQIYAGLNDALLIVDSGHRIVRINPAGEALLGTSGKHLIGRNIGETLEFADPRLTSALTDPEANLAARSVSVFHGGRDLGQVDFDIHTLLADPQWRIVSLTSIRQEGPFSANDATDQSIFSVRAPDILSHEIKNPLAAINGAAQLLDRQLNEDQKPLTQMIKSEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI000D68CA30 (ATP-binding protein n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D68CA30)

HSP 1 Score: 174 bits (442), Expect = 1.620e-50
Identity = 86/170 (50.59%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PS EQI   L  A++++D    I ++NP  E  FG SAKHLIG  + + LQF D RL  AL   D ++ AR V V+   R+ G+V+FDIH + +   WR++S+A +P DGP++E +  +    ++RAPDIL HEIKNPLAAI+GAAQLLDR ++Q Q+TLT MI GEVER
Sbjct:    5 PSAEQIFVALPDALLIIDENHEIAKVNPVAEHFFGQSAKHLIGDHISNQLQFEDDRLVNALTDKDANVAARRVAVTLKGRQAGLVNFDIHSIPADQRWRIVSIAPLPTDGPVIEQQQGEQDQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSIDQDQRTLTHMIKGEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A3B0S4Z5_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S4Z5_9ZZZZ)

HSP 1 Score: 170 bits (431), Expect = 6.790e-49
Identity = 89/170 (52.35%), Postives = 110/170 (64.71%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PS EQIL+GL   ++V+D    IT++NPA EA  GTSAK +IG  +     F D R+N AL  P+ +LTA  +    +     +VDFDIHPL +   WR+ISL+L P D PI   E   P   +IRAPDIL HEIKNPLAAI+GAAQLLDR ++  QK LT MI  EVER
Sbjct:    5 PSAEQILSGLPGILLVIDQKHRITKLNPAAEAYLGTSAKRIIGDPISSHFIFDDERVNQALDDPEANLTANRITTMINGYSRNVVDFDIHPLTADPRWRIISLSLQPADDPISNREGDHPDQFSIRAPDILGHEIKNPLAAIKGAAQLLDRSLDDDQKALTAMIKSEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001E32DBE8 (ATP-binding protein n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E32DBE8)

HSP 1 Score: 165 bits (418), Expect = 5.930e-47
Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PS EQI AGL   ++++D    I ++NP  E+  G SA+HLIG  + + +QF D RL  AL+  D +L AR V VS   R+ G+V+FDIH + +   WR++S+A +P  GP++E  + +    ++RAPDIL HEIKNPLAAI+GAAQLLDR +++ Q++LT MI  EVER
Sbjct:    5 PSAEQIFAGLPDVLLIIDEHHKIAKVNPVAESFVGQSARHLIGTHIAEQIQFQDNRLVKALVDRDANLAARRVPVSVKGREAGLVNFDIHAVPTDQRWRIVSIAPLPAGGPVVEKLSGEQDQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSLDEEQRSLTNMIKVEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A1N6FQM4_9SPHN (Histidine kinase n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6FQM4_9SPHN)

HSP 1 Score: 162 bits (410), Expect = 9.700e-46
Identity = 89/170 (52.35%), Postives = 114/170 (67.06%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            P+ EQI +GL  A+++VD   LIT++NPA E   GTSAK+L+G+ V   +QF D RL +AL   D +L AR + VS    K G VDF I  L +   WR+ISL+ +P DGP    E+   +  +IRAPDIL HEIKNPLAAI+GAAQLLDR +++ QK LT MI  EVER
Sbjct:    5 PATEQIFSGLPDALILVDPDHLITKVNPAAEQFLGTSAKNLVGQPVQQQIQFGDGRLASALEDADANLAARRMAVSVRGTKSGFVDFSIQTLPNNPVWRIISLSPLPSDGPENVDESGGSNEFSIRAPDILGHEIKNPLAAIKGAAQLLDRSISEEQKNLTAMIKLEVER 174          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001AA0390A (ATP-binding protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0390A)

HSP 1 Score: 154 bits (388), Expect = 1.240e-42
Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = 0
Query:   14 IMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            ++++D    I ++NP  E   G SA+HLIG  V D +QF D RL  AL+  + ++ AR V V    ++ G+V+FDIH + S   WR++S+A +P DGP++E  + +    ++RAPDIL HEIKNPLAAI+GAAQLLDR ++  Q+ LT MI GEVER
Sbjct:    1 MLIIDENHQIAKVNPVAENFLGQSARHLIGAHVADQIQFQDERLAKALLNREANVAARRVPVIVKGQEGGLVNFDIHTIPSDQRWRIVSIAPLPADGPVIERRSSEQEQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSLSDDQRPLTHMIKGEVER 157          
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A6H2DKE7_9SPHN (Histidine kinase n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DKE7_9SPHN)

HSP 1 Score: 152 bits (385), Expect = 5.200e-42
Identity = 79/170 (46.47%), Postives = 108/170 (63.53%), Query Frame = 0
Query:    1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 170
            PS EQI A L  A++++D    I ++NP  E    TS+K L+GRK+ D + F D RL  AL   D +L AR V ++  +    +V+F+IH + S  DWRL+S+A +P DG  +      P   +IRAPDIL HEIKNPLAAI+GAAQLL+R +++ QK L  MI  EV+R
Sbjct:    5 PSAEQIFASLPDALLLIDEDHHIGQVNPVAENFLQTSSKRLVGRKIGDFISFVDERLTNALEDCDANLAARNVPITIRDTHSAMVNFEIHAITSNEDWRLVSIAPLPVDGAAIGEREDQPHQFSIRAPDILGHEIKNPLAAIKGAAQLLNRGLSEDQKPLADMIQAEVKR 174          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001593D9C91.050e-111100.00ATP-binding protein n=1 Tax=Parasphingorhabdus fla... [more]
A0A2G2D9A1_9SPHN1.280e-8576.47Histidine kinase n=2 Tax=Sphingomonadales TaxID=20... [more]
A0A127MF26_9SPHN7.770e-8275.29Histidine kinase n=5 Tax=Sphingomonadaceae TaxID=4... [more]
A0A1B6Z5K8_9SPHN1.050e-6060.59Histidine kinase n=1 Tax=Sphingomonadales bacteriu... [more]
UPI000D68CA301.620e-5050.59ATP-binding protein n=1 Tax=Sphingorhabdus sp. EL1... [more]
A0A3B0S4Z5_9ZZZZ6.790e-4952.35Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
UPI001E32DBE85.930e-4748.24ATP-binding protein n=1 Tax=Parasphingorhabdus lit... [more]
A0A1N6FQM4_9SPHN9.700e-4652.35Histidine kinase n=1 Tax=Parasphingorhabdus marina... [more]
UPI001AA0390A1.240e-4247.77ATP-binding protein n=1 Tax=Parasphingorhabdus sp.... [more]
A0A6H2DKE7_9SPHN5.200e-4246.47Histidine kinase n=1 Tax=Parasphingorhabdus haloto... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 1..66
e-value: 0.0075
score: 25.5
IPR000014PAS domainPFAMPF13188PAS_8coord: 5..55
e-value: 2.7E-5
score: 24.1
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 6..50
e-value: 4.6E-6
score: 24.7
IPR000014PAS domainPROSITEPS50112PAScoord: 1..55
score: 9.363
NoneNo IPR availableGENE3D1.10.287.130coord: 130..170
e-value: 2.6E-9
score: 39.1
NoneNo IPR availableGENE3D3.30.450.20coord: 3..103
e-value: 1.3E-9
score: 39.9
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainPFAMPF00512HisKAcoord: 131..170
e-value: 1.3E-7
score: 31.5
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 4..54
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilySUPERFAMILY47384Homodimeric domain of signal transducing histidine kinasecoord: 130..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125778contigM-pyrifera_M_contig125778:2..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125778.5213.1mRNA_M-pyrifera_M_contig125778.5213.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125778 2..511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125778.5213.1 ID=prot_M-pyrifera_M_contig125778.5213.1|Name=mRNA_M-pyrifera_M_contig125778.5213.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDAL
QFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRL
ISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLD
RQMNQTQKTLTQMIIGEVER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR003661HisK_dim/P
IPR035965PAS-like_dom_sf
IPR036097HisK_dim/P_sf