mRNA_M-pyrifera_M_contig125778.5213.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001593D9C9 (ATP-binding protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593D9C9) HSP 1 Score: 330 bits (847), Expect = 1.050e-111 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER
Sbjct: 5 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A2G2D9A1_9SPHN (Histidine kinase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A2G2D9A1_9SPHN) HSP 1 Score: 264 bits (675), Expect = 1.280e-85 Identity = 130/170 (76.47%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PSGEQILAGL++A++++D+G LITR+NP+GEALFGTSAK+L+GR++DD LQFSD RL AAL PD SLTAR VMV+S++RKLGIVDFDIHPLAS S+WRLISL+++PQDGPILE+EN DPS+LAIRAPDILSHEIKNPLAAIRGAAQLLDR ++++QK LTQMI EVER
Sbjct: 5 PSGEQILAGLSHALIILDTGHLITRVNPSGEALFGTSAKNLLGRRIDDVLQFSDARLQAALTEPDISLTARSVMVTSEDRKLGIVDFDIHPLASDSEWRLISLSVLPQDGPILENENPDPSDLAIRAPDILSHEIKNPLAAIRGAAQLLDRNLDESQKPLTQMITAEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A127MF26_9SPHN (Histidine kinase n=5 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A127MF26_9SPHN) HSP 1 Score: 254 bits (650), Expect = 7.770e-82 Identity = 128/170 (75.29%), Postives = 149/170 (87.65%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
P +QILAGL+ A++VVDS + R+NPAGEALFGTSAKHL+GRK++ L FSD RL+AAL + SLTARGV+V SD+RKLGIVDFDIHPLAS + WRLISL+LMPQDGPILE+EN+DPSNLAIRAPDILSHEIKNPLAAI+GAAQLLDRQ+++TQK LTQMI EVER
Sbjct: 5 PPADQILAGLSLALLVVDSDHNVARVNPAGEALFGTSAKHLVGRKINHVLHFSDARLDAALTEQEISLTARGVIVFSDDRKLGIVDFDIHPLASNAKWRLISLSLMPQDGPILENENNDPSNLAIRAPDILSHEIKNPLAAIKGAAQLLDRQLDETQKPLTQMITAEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A1B6Z5K8_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z5K8_9SPHN) HSP 1 Score: 201 bits (510), Expect = 1.050e-60 Identity = 103/170 (60.59%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PS +QI AGLN A+++VDSG I RINPAGEAL GTS KHLIGR + + L+F+DPRL +AL P+ +L AR V V R LG VDFDIH L + WR++SL + Q+GP ++ D S ++RAPDILSHEIKNPLAAI GAAQLLDRQ+N+ QK LTQMI EVER
Sbjct: 5 PSADQIYAGLNDALLIVDSGHRIVRINPAGEALLGTSGKHLIGRNIGETLEFADPRLTSALTDPEANLAARSVSVFHGGRDLGQVDFDIHTLLADPQWRIVSLTSIRQEGPFSANDATDQSIFSVRAPDILSHEIKNPLAAINGAAQLLDRQLNEDQKPLTQMIKSEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI000D68CA30 (ATP-binding protein n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D68CA30) HSP 1 Score: 174 bits (442), Expect = 1.620e-50 Identity = 86/170 (50.59%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PS EQI L A++++D I ++NP E FG SAKHLIG + + LQF D RL AL D ++ AR V V+ R+ G+V+FDIH + + WR++S+A +P DGP++E + + ++RAPDIL HEIKNPLAAI+GAAQLLDR ++Q Q+TLT MI GEVER
Sbjct: 5 PSAEQIFVALPDALLIIDENHEIAKVNPVAEHFFGQSAKHLIGDHISNQLQFEDDRLVNALTDKDANVAARRVAVTLKGRQAGLVNFDIHSIPADQRWRIVSIAPLPTDGPVIEQQQGEQDQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSIDQDQRTLTHMIKGEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A3B0S4Z5_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S4Z5_9ZZZZ) HSP 1 Score: 170 bits (431), Expect = 6.790e-49 Identity = 89/170 (52.35%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PS EQIL+GL ++V+D IT++NPA EA GTSAK +IG + F D R+N AL P+ +LTA + + +VDFDIHPL + WR+ISL+L P D PI E P +IRAPDIL HEIKNPLAAI+GAAQLLDR ++ QK LT MI EVER
Sbjct: 5 PSAEQILSGLPGILLVIDQKHRITKLNPAAEAYLGTSAKRIIGDPISSHFIFDDERVNQALDDPEANLTANRITTMINGYSRNVVDFDIHPLTADPRWRIISLSLQPADDPISNREGDHPDQFSIRAPDILGHEIKNPLAAIKGAAQLLDRSLDDDQKALTAMIKSEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001E32DBE8 (ATP-binding protein n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E32DBE8) HSP 1 Score: 165 bits (418), Expect = 5.930e-47 Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PS EQI AGL ++++D I ++NP E+ G SA+HLIG + + +QF D RL AL+ D +L AR V VS R+ G+V+FDIH + + WR++S+A +P GP++E + + ++RAPDIL HEIKNPLAAI+GAAQLLDR +++ Q++LT MI EVER
Sbjct: 5 PSAEQIFAGLPDVLLIIDEHHKIAKVNPVAESFVGQSARHLIGTHIAEQIQFQDNRLVKALVDRDANLAARRVPVSVKGREAGLVNFDIHAVPTDQRWRIVSIAPLPAGGPVVEKLSGEQDQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSLDEEQRSLTNMIKVEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A1N6FQM4_9SPHN (Histidine kinase n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6FQM4_9SPHN) HSP 1 Score: 162 bits (410), Expect = 9.700e-46 Identity = 89/170 (52.35%), Postives = 114/170 (67.06%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
P+ EQI +GL A+++VD LIT++NPA E GTSAK+L+G+ V +QF D RL +AL D +L AR + VS K G VDF I L + WR+ISL+ +P DGP E+ + +IRAPDIL HEIKNPLAAI+GAAQLLDR +++ QK LT MI EVER
Sbjct: 5 PATEQIFSGLPDALILVDPDHLITKVNPAAEQFLGTSAKNLVGQPVQQQIQFGDGRLASALEDADANLAARRMAVSVRGTKSGFVDFSIQTLPNNPVWRIISLSPLPSDGPENVDESGGSNEFSIRAPDILGHEIKNPLAAIKGAAQLLDRSISEEQKNLTAMIKLEVER 174
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: UPI001AA0390A (ATP-binding protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0390A) HSP 1 Score: 154 bits (388), Expect = 1.240e-42 Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 40 IMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
++++D I ++NP E G SA+HLIG V D +QF D RL AL+ + ++ AR V V ++ G+V+FDIH + S WR++S+A +P DGP++E + + ++RAPDIL HEIKNPLAAI+GAAQLLDR ++ Q+ LT MI GEVER
Sbjct: 1 MLIIDENHQIAKVNPVAENFLGQSARHLIGAHVADQIQFQDERLAKALLNREANVAARRVPVIVKGQEGGLVNFDIHTIPSDQRWRIVSIAPLPADGPVIERRSSEQEQFSVRAPDILGHEIKNPLAAIKGAAQLLDRSLSDDQRPLTHMIKGEVER 157
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Match: A0A6H2DKE7_9SPHN (Histidine kinase n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DKE7_9SPHN) HSP 1 Score: 152 bits (385), Expect = 5.200e-42 Identity = 79/170 (46.47%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 1 PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALQFSDPRLNAALIAPDTSLTARGVMVSSDERKLGIVDFDIHPLASGSDWRLISLALMPQDGPILESENHDPSNLAIRAPDILSHEIKNPLAAIRGAAQLLDRQMNQTQKTLTQMIIGEVER 510
PS EQI A L A++++D I ++NP E TS+K L+GRK+ D + F D RL AL D +L AR V ++ + +V+F+IH + S DWRL+S+A +P DG + P +IRAPDIL HEIKNPLAAI+GAAQLL+R +++ QK L MI EV+R
Sbjct: 5 PSAEQIFASLPDALLLIDEDHHIGQVNPVAENFLQTSSKRLVGRKIGDFISFVDERLTNALEDCDANLAARNVPITIRDTHSAMVNFEIHAITSNEDWRLVSIAPLPVDGAAIGEREDQPHQFSIRAPDILGHEIKNPLAAIKGAAQLLNRGLSEDQKPLADMIQAEVKR 174 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125778.5213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125778.5213.1 >prot_M-pyrifera_M_contig125778.5213.1 ID=prot_M-pyrifera_M_contig125778.5213.1|Name=mRNA_M-pyrifera_M_contig125778.5213.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp PSGEQILAGLNYAIMVVDSGDLITRINPAGEALFGTSAKHLIGRKVDDALback to top mRNA from alignment at M-pyrifera_M_contig125778:2..511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125778.5213.1 ID=mRNA_M-pyrifera_M_contig125778.5213.1|Name=mRNA_M-pyrifera_M_contig125778.5213.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig125778:2..511+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125778:2..511+ >mRNA_M-pyrifera_M_contig125778.5213.1 ID=mRNA_M-pyrifera_M_contig125778.5213.1|Name=mRNA_M-pyrifera_M_contig125778.5213.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig125778:2..511+ (Macrocystis pyrifera P11B4 male)back to top |