prot_M-pyrifera_M_contig125753.5204.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125753.5204.1
Unique Nameprot_M-pyrifera_M_contig125753.5204.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
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BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S4M9B2_9EUKA (Arginine--tRNA ligase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M9B2_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 1.550e-34
Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 0 
Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            +RD +  D ++  KG CAR +K D V Y+  L  AL A +   E P   LRD +A NG++N+F+NR ++F      V  LG +YG S++  GQ++IIEHTS+NPNGPLHIGNLRN ++GAHL+KL  AVGYEV+QH
Sbjct:   45 TRDSSNGDFTVILKGACAR-RKIDVVKYSNELTEALNAFL--KENPKSYLRDSNAMNGYVNLFVNRSSIFEDTIKTVLGLGEKYGSSDKMAGQKVIIEHTSSNPNGPLHIGNLRNVMLGAHLSKLFEAVGYEVKQH 177
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BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S0R1X4_9CHLO (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R1X4_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 4.940e-32
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 0 
Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            SRDL KADL+M +  +CA+ +K +   +T  LA  +   ++A  A   L+  V+    +LNVFLNR   F     AV +LG+++GH ++  G++++IEHTSANPN PLHIGNLRN ++GAHLA ++ AVGY+V+QH
Sbjct:   44 SRDLEKADLTMLWAPVCAK-RKMNPAKFTAELADFINEKLSA-NADGLLVSKVAGVGPYLNVFLNRGETFRLTVRAVLKLGAKFGHVDQNAGKKVVIEHTSANPNAPLHIGNLRNVMIGAHLANIMKAVGYDVKQH 177
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BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S0SHG2_9CHLO (Arginine--tRNA ligase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHG2_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 4.280e-29
Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 0 
Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            SRDLAKAD ++Q+    A+ +K + VAY   LA  L+A I    +P  L+  VS    +LN+F++R  VF  A  AV   G+ +GH+    G+R+IIEHTS+NPN PLHIGNLRN ++GAHLAK+ AA G+ V+Q
Sbjct:   44 SRDLAKADFTVQWSAFAAK-RKLNPVAYVTELAAGLQARIDG-SSPRGLITRVSGVGPYLNLFVDRARVFRLALRAVAHAGNTFGHTNAAGGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKMQAACGFSVKQ 176
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BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S2T8X7_9CHLO (Arginine--tRNA ligase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T8X7_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 1.110e-28
Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 0 
Query:    1 MILSRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIA---APEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            M +SR L + D ++Q   LCARAK    V   +A+A AL+A +A   A EA  +L++ V+A   +LNV LNR  V+     AV   G+ YG ++  KG+R+I+EHTS+NPN PLHIGNLRN ++GAH A+L+ +VG EV+QH
Sbjct:   55 MEMSRRLDQGDFAVQLAPLCARAKTNP-VQGAKAIAEALQASLASLSATEAATRLVKGVAAAGPYLNVSLNRPLVYKRVVEAVASRGAEYGVTDLWKGKRVIVEHTSSNPNAPLHIGNLRNVMIGAHAARLIQSVGAEVKQH 195
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A5B8N0V1_9CHLO (Arginine--tRNA ligase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N0V1_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 9.070e-25
Identity = 57/139 (41.01%), Postives = 90/139 (64.75%), Query Frame = 0 
Query:    4 SRDLAKADLSMQFKGLCARAKKKD---AVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            SR L + D+++Q   +CAR K      A   +E + T L + ++A E   KL++ V+    +LN+FL+R  ++      V  +G+RYG +E  KG+R+++EHTS+NPN PLHIGNLRN ++GAH A+L+ + G +V+QH
Sbjct:   61 SRRLDQGDIAVQLAPVCARVKTNPVHGAKVISEFIMTHLNS-LSADERKGKLVQKVACAGPYLNIFLSRPMMYKRVVEQVLEMGARYGFTEAWKGKRVLVEHTSSNPNAPLHIGNLRNVMIGAHTARLIESAGADVKQH 198
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: K8EIQ7_9CHLO (Arginine--tRNA ligase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIQ7_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.220e-24
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = 0 
Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            +RDL+KAD ++Q+   CA+ +K +   Y + L+  ++  I         ++ V     ++N+F+ RQ VF  A +A+   G++YG +   +G+++IIEHTS+NPN PLHIGNLRN ++GAHLA+++ A G EV Q
Sbjct:   30 TRDLSKADFTVQWSRFCAK-RKLNPAEYVKNLSETIQKQIEDGAHQDGFIKSVQGVGPYMNIFVKRQKVFKLAINAIIEQGTKYGCTNAGQGKKVIIEHTSSNPNAPLHIGNLRNVMIGAHLARVMQACGCEVTQ 163
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7R9WC40_9CHLO (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7R9WC40_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 1.180e-20
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 0 
Query:   57 SAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            +A   +LN+ LNR  VF  A  +V   G  +GH++  KG+R+IIEHTS+NPN PLHIGNLRN ++GAHLA+L+ A G++ ++
Sbjct:   98 AAAGVYLNMSLNRPKVFEMALRSVASQGETFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLARLMKACGHDAKE 179
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: C1E9E9_MICCC (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9E9_MICCC)

HSP 1 Score: 96.3 bits (238), Expect = 1.390e-20
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 0 
Query:   52 LLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            L+  V     +LN+F++R  VF     AV   G ++GH++   G+R+IIEHTS+NPN PLHIGNLRN ++GAHLAK+ AA G+ V+Q
Sbjct:    1 LITKVQGVGPYLNLFVDRARVFRLVIRAVSAQGDKFGHTKAAGGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKMQAACGFAVKQ 87
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A4S1B0_OSTLU (Arginine--tRNA ligase n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S1B0_OSTLU)

HSP 1 Score: 96.3 bits (238), Expect = 1.820e-20
Identity = 40/77 (51.95%), Postives = 61/77 (79.22%), Query Frame = 0 
Query:   62 FLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            ++N+ +NR  VF A   AV R G ++GH++  KG+R+IIEHTS+NPN PLHIGNLRN ++GAHL++++ A G++V++
Sbjct:   36 YVNLKMNRPMVFEATMKAVARRGGKFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLSRMMKACGHDVKE 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A1Y5IBF2_OSTTA (Arginine--tRNA ligase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IBF2_OSTTA)

HSP 1 Score: 95.1 bits (235), Expect = 4.690e-20
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0 
Query:   62 FLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            + N+ LNR  VF A   +  + G+ +GH+   KG+R+IIEHTS+NPN PLHIGNLRN ++GAHLAKL+ A G+EV++
Sbjct:  107 YANMTLNRPMVFEAVMKSAAKQGATFGHTNAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKLMKACGHEVQE 183
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M9B2_9EUKA1.550e-3451.47Arginine--tRNA ligase n=1 Tax=Vannella sp. CB-2014... [more]
A0A7S0R1X4_9CHLO4.940e-3247.06Arginyl-tRNA synthetase (Fragment) n=1 Tax=Pyramim... [more]
A0A7S0SHG2_9CHLO4.280e-2948.89Arginine--tRNA ligase n=1 Tax=Mantoniella antarcti... [more]
A0A7S2T8X7_9CHLO1.110e-2847.89Arginine--tRNA ligase n=1 Tax=Chloropicon roscoffe... [more]
A0A5B8N0V1_9CHLO9.070e-2541.01Arginine--tRNA ligase n=1 Tax=Chloropicon primus T... [more]
K8EIQ7_9CHLO1.220e-2440.00Arginine--tRNA ligase n=1 Tax=Bathycoccus prasinos... [more]
A0A7R9WC40_9CHLO1.180e-2051.22Arginyl-tRNA synthetase (Fragment) n=1 Tax=Ostreoc... [more]
C1E9E9_MICCC1.390e-2050.57Arginyl-tRNA synthetase (Fragment) n=1 Tax=Micromo... [more]
A4S1B0_OSTLU1.820e-2051.95Arginine--tRNA ligase n=2 Tax=Ostreococcus sp. 'lu... [more]
A0A1Y5IBF2_OSTTA4.690e-2054.55Arginine--tRNA ligase n=2 Tax=Ostreococcus tauri T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001278Arginine-tRNA ligasePRINTSPR01038TRNASYNTHARGcoord: 112..128
score: 40.74
coord: 97..112
score: 44.91
IPR001278Arginine-tRNA ligasePANTHERPTHR11956ARGINYL-TRNA SYNTHETASEcoord: 11..138
IPR035684Arginyl-tRNA synthetase, catalytic core domainPFAMPF00750tRNA-synt_1dcoord: 90..136
e-value: 9.9E-6
score: 24.7
IPR036695Arginyl tRNA synthetase N-terminal domain superfamilyGENE3D3.30.1360.70coord: 2..92
e-value: 2.7E-6
score: 29.6
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 94..139
e-value: 2.8E-14
score: 55.2
NoneNo IPR availablePANTHERPTHR11956:SF7coord: 11..138
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 93..137
IPR001412Aminoacyl-tRNA synthetase, class I, conserved sitePROSITEPS00178AA_TRNA_LIGASE_Icoord: 107..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125753contigM-pyrifera_M_contig125753:97..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125753.5204.1mRNA_M-pyrifera_M_contig125753.5204.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125753 91..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125753.5204.1 ID=prot_M-pyrifera_M_contig125753.5204.1|Name=mRNA_M-pyrifera_M_contig125753.5204.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
MILSRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPC
KLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLII
EHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001278Arg-tRNA-ligase
IPR035684ArgRS_core
IPR036695Arg-tRNA-synth_N_sf
IPR014729Rossmann-like_a/b/a_fold
IPR001412aa-tRNA-synth_I_CS