mRNA_M-pyrifera_M_contig125589.5178.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A5A8CW03_CAFRO (CAP-Gly domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CW03_CAFRO) HSP 1 Score: 68.6 bits (166), Expect = 1.800e-11 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F +L +L++ + +ASW +V ALA FP L L++ G V+ GE R R EV+ARL ++ LN SEVR REREDAEKAYV
Sbjct: 408 FASLTSLTLSDNPIASWDSVTALAAFPALTALRVSGAGVV--GELGSNRARLEVVARLASVRTLNGSEVRPREREDAEKAYV 487
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A7S1C881_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C881_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.630e-9 Identity = 42/83 (50.60%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVL-SAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F L+ LS+ + +ASW VD L FP L L+ Q PV SAG +R VIARLP L+ LN SEVR RER DAEK Y+
Sbjct: 357 FRALKFLSLASNAIASWDVVDRLRHFPSLDSLRFQRNPVTESAGP---TEMRMVVIARLPALRTLNGSEVRPRERSDAEKTYL 436
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A7D9H8I8_9CUCU (Mulet (Fragment) n=1 Tax=Rhyzobius pseudopulcher TaxID=1661851 RepID=A0A7D9H8I8_9CUCU) HSP 1 Score: 59.7 bits (143), Expect = 2.230e-8 Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHS-EVRKREREDAEKAYV 279
F L+ L++ + LA+W ++ L+LFP L +++QGCP+ + E RQ +IARLP ++ LN ++ EREDAE+A++
Sbjct: 215 FRKLKILNMNSTNLAAWEDIERLSLFPALNCVRIQGCPLWESNEYTEHERRQLLIARLPNVETLNGGGKIGHDEREDAERAFI 297
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A0M0K1Y2_9EUKA (Tubulin-specific chaperone e-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1Y2_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 2.300e-8 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F L L +R +L SW ++DAL +P L ++ P+ SA G R+ VIAR+ +LK LN SEVR REREDAE+ Y+
Sbjct: 259 FSTLRHLMLRGNKLDSWASIDALDAYPSLTEARLAELPLTSAISGAA--ARRFVIARMHKLKALNGSEVRPREREDAERFYL 338
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A812YNE0_9DINO (TFCE protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YNE0_9DINO) HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 13 TATPTLWFENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRV-RQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
T+TP F LE+LS+ + +ASW + AL FP L+ ++++ P+L E + P RQ +IAR+ +L+ LN SEVR RER DAE Y+
Sbjct: 141 TSTPP--FRALESLSLSHTDIASWQTIYALDKFPALRDVRLRHVPLL---ESLSPAAARQGIIARMRRLQQLNASEVRGRERSDAETLYL 225
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A7S2D9S3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D9S3_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 1.520e-7 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F LE L +R + SW ++DAL F RL +++ P+ S G R+ +I RL +L+ LN SEVR REREDAE+ Y+
Sbjct: 48 FGALEHLMLRGNPIDSWASIDALDSFERLTEMRLAELPLTSEMSGAA--ARRVIIGRLGKLRALNGSEVRTREREDAERFYL 127
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A074ZL65_9TREM (Tubulin-specific chaperone E n=8 Tax=Opisthorchiidae TaxID=6196 RepID=A0A074ZL65_9TREM) HSP 1 Score: 53.1 bits (126), Expect = 4.710e-6 Identity = 31/86 (36.05%), Postives = 45/86 (52.33%), Query Frame = 1
Query: 22 PTLWFENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
P++WF+ L L++RN +W + L RL+ L CPVL + RQE+IARLP + +N +V ER AE Y+
Sbjct: 445 PSIWFQALTTLNMRNTAFTNWHPIKQLLRLHRLEQLTFSDCPVLE--NLTIETARQELIARLPHVSCINRIQVCPDERRGAELDYL 528
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A183RTA6_9TREM (Uncharacterized protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183RTA6_9TREM) HSP 1 Score: 52.8 bits (125), Expect = 6.340e-6 Identity = 31/82 (37.80%), Postives = 42/82 (51.22%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F NL L ++N +W V+ L +L L + GCPV + RQEVIARLP LK L+ E+ ER +E Y+
Sbjct: 394 FRNLNTLGLKNNLFTNWNFVNQLLNLSKLDHLMVSGCPVFENSVNIAT-ARQEVIARLPNLKMLDRVEITPEERRGSELDYL 474
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A095AW96_SCHHA (Tubulin-specific chaperone E n=6 Tax=Schistosoma TaxID=6181 RepID=A0A095AW96_SCHHA) HSP 1 Score: 52.8 bits (125), Expect = 6.450e-6 Identity = 31/82 (37.80%), Postives = 42/82 (51.22%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F NL L ++N +W V+ L +L L + GCPV + RQEVIARLP LK L+ E+ ER +E Y+
Sbjct: 470 FRNLNTLGLKNNLFTNWNFVNQLLHLSKLDHLMVSGCPVFENSVSI-ETARQEVIARLPNLKMLDRVEITPEERRGSELDYL 550
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Match: A0A7S3AJB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJB9_9EUKA) HSP 1 Score: 50.8 bits (120), Expect = 7.300e-6 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 34 FENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVLSAGEGVLPRVRQEVIARLPQLKNLNHSEVRKREREDAEKAYV 279
F L + +R ++ W +DAL F L ++ P+ S G + R+ VIAR+ +LK LN SEVR REREDAE+ Y+
Sbjct: 15 FATLRHIMLRGNPISGWETIDALDSFGELVEARIAELPLTSTISGAV--ARRLVIARIGKLKILNGSEVRVREREDAERFYL 94 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125589.5178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125589.5178.1 >prot_M-pyrifera_M_contig125589.5178.1 ID=prot_M-pyrifera_M_contig125589.5178.1|Name=mRNA_M-pyrifera_M_contig125589.5178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp TSSATATPTLWFENLEALSIRNCQLASWGAVDALALFPRLQWLQMQGCPVback to top mRNA from alignment at M-pyrifera_M_contig125589:41..319+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125589.5178.1 ID=mRNA_M-pyrifera_M_contig125589.5178.1|Name=mRNA_M-pyrifera_M_contig125589.5178.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig125589:41..319+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125589:41..319+ >mRNA_M-pyrifera_M_contig125589.5178.1 ID=mRNA_M-pyrifera_M_contig125589.5178.1|Name=mRNA_M-pyrifera_M_contig125589.5178.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig125589:41..319+ (Macrocystis pyrifera P11B4 male)back to top |