prot_M-pyrifera_M_contig125559.5168.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125559.5168.1
Unique Nameprot_M-pyrifera_M_contig125559.5168.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: F2UL12_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UL12_SALR5)

HSP 1 Score: 77.0 bits (188), Expect = 2.600e-13
Identity = 58/157 (36.94%), Postives = 78/157 (49.68%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAAT----VDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWS 163
            VW  + LPS T  L PVPAP+GGVVV+  N +FY+ QS     A+NG++ A+    +   T  SLDL         DGA    LTPT +L +L +GD     +V +  +     V GLR+  L    +       G R+  IF  SR   S LL W+
Sbjct:  256 VWHQENLPSDTFALQPVPAPLGGVVVIGVNVLFYVTQSLVRSLALNGYSRASTNAPIQEQTGISLDL---------DGAHHALLTPTQILFALPSGDIHLLTIVCTDVT-----VDGLRMDKLATSVIGSDICTLGRRH--IFIASRHATSLLLEWA 396          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A4V1IVT9_9FUNG (CPSF A subunit region-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IVT9_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 1.200e-12
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 0
Query:    1 IDLARQSLTRVWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACA-AVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWSD 164
            +DL  +    ++  D LP   HTLLPVPAP+GG+ V++++ + Y+DQ +     AVN  A+A     T+ SL      L  TLD +   FLTP  LL++L  G+    +L+    S     +  +R+  + A  LT  CA T   + + F GSR+ DS L+ +++
Sbjct:  240 LDLTNRKFPIIYRRDRLPYDCHTLLPVPAPLGGLFVIANSCLIYVDQGSPGVGVAVNARASAC----TSFSLREEQMQLGITLDASHYTFLTPYRLLITLAGGELFLAELIRDGRS-----ITDIRLGKVGASVLTS-CACT-LGSSYFFLGSRVADSLLIQYTE 393          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A8J4PUB6_9MYCE (CPSF_A domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUB6_9MYCE)

HSP 1 Score: 74.7 bits (182), Expect = 1.650e-12
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPP-CALTGTRNRWIFHGSRLGDSFLLSWSDPA 166
            +WS D  P + H+L+ VP P+GG +V+S N +FY++QS+R   AVN +A        +  LDLS  +L  TLD +   FL     + SL+ G+ L   L+   S G S Q   + ++      LT   C L+   N  IF GSRLGDS LL +++ +
Sbjct:  337 IWSIDQFPYNCHSLVSVPDPLGGALVISANILFYINQSSRYGLAVNEYATKDTGDQFSFPLDLSL-NLVFTLDRSNFVFLESDKFIGSLKGGELLIFHLI---SDGRSVQ--RMHVSKAGGSVLTSSVCVLS---NNLIFLGSRLGDSLLLQYTEKS 484          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A397HFG4_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HFG4_9GLOM)

HSP 1 Score: 74.7 bits (182), Expect = 1.650e-12
Identity = 55/153 (35.95%), Postives = 83/153 (54.25%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACA-AVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSW 162
            + S D LP S   L+ +P PVGG++++S NAI +++QS++    AVNG+A++T D     SLD S   L   L+G    FL    +L  LRNGD    +L+    S     +  + +  +   TL P C+     N + F GSRLGDS+L+ +
Sbjct:  284 IQSMDNLPHSCVKLISIPKPVGGILIISANAIIHVNQSSKGIGVAVNGYASSTTDF----SLDHSFEHLGLALEGLYHVFLDSDEILFILRNGDLYIVKLIIEERS-----LTRIELKKVGTSTL-PSCSCL-VANGYFFVGSRLGDSYLIQY 425          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.680e-12
Identity = 65/219 (29.68%), Postives = 101/219 (46.12%), Query Frame = 0
Query:    1 IDLARQSLTRVWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQS-TRACAAVNGFAAATVDSTTTAS-----------------------LDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDA----LHTQLVTSSSS--------------GPSQQVIGLRITPLHAYTLTPPCALTGTRNRW--------------IFHGSRLGDSFLLSWS 163
            I+L +     +W  + LP  +  L+PVP+P+GG+ V+S NA+ +++QS  R+  AVNG+A ATVD                             +DLS+  +   LD  R  FLTPTS+LLSLR G+     LH   VT++++              G   +V+G  + P+   +   PC++                     +F GSR+GDS L+ +S
Sbjct:  348 INLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRAS---PCSVLAVAXXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYS 563          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A397U2H9_9GLOM (CPSF A subunit region-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U2H9_9GLOM)

HSP 1 Score: 73.9 bits (180), Expect = 3.050e-12
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0
Query:    1 IDLARQSLTRVWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACA-AVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWSDPAS 167
            ID++++    ++S D LP S+  L+P+  PVGG+++++ NAI ++DQS+     AVNG+A +T D      LD S   L   L+G    FL    +LL LRNG     +L+    S         RIT     T T P         + F GSRLGDS L+ +    S
Sbjct:  287 IDISQKLYPVIYSMDKLPHSSVKLIPIQKPVGGILIITANAIIHVDQSSPGIGIAVNGYATSTTDFP----LDNSFEHLGLALEGCHYVFLDKDEILLFLRNGGMYLVKLIKDGRSIS-------RITIEKVGTNTLPSCACYVAPDYFFLGSRLGDSHLIQYKAAKS 443          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A7J7MMM3_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MMM3_9MAGN)

HSP 1 Score: 73.9 bits (180), Expect = 3.050e-12
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWS 163
            +WS+D L    + LL VP+P+GGV+VLS NAI+Y  QS     A+N +A A VDS    S +L  +S    LD A   +L+    +LS + G+ L   LV    +     V  L ++   A  LT      G  N + F GSRLGDS L+ ++
Sbjct:  300 IWSADNLSHDAYKLLAVPSPIGGVLVLSANAIYYHSQSVSCLLALNNYAVA-VDS----SQELPRSSFTVELDAANTTWLSHEVAMLSTKTGELLLLTLVYDGRA-----VQRLELSKSRASVLTSDVTTIG--NSFFFLGSRLGDSMLVQFT 440          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A833RH79_9POAL (Cleavage and polyadenylation specificity factor subunit 1 isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RH79_9POAL)

HSP 1 Score: 73.6 bits (179), Expect = 4.140e-12
Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWSDPAS 167
            +WS+  LP   + LL VPAP+GGV+V+  NAI+Y  QST    A+N F+     S    SL++  ++    LD A   +L+    L S++ G+ L   L+T  ++G   Q + L  T  ++  LT    +T   N + F  SRLGDS L+ +   AS
Sbjct:  278 IWSASNLPHDAYKLLAVPAPLGGVLVMCANAIYYHSQSTSCSLALNSFS-----SQPDGSLEMPKSNFSVELDAANATWLSNDIALFSVKTGELL---LLTLVNNGRGVQRLDL--TKANSSVLTS--GMTTLGNSFFFLASRLGDSILVQYCSGAS 422          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: A0A200QB66_9MAGN (Cleavage/polyadenylation specificity factor n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QB66_9MAGN)

HSP 1 Score: 72.8 bits (177), Expect = 7.670e-12
Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWS 163
            +WS+  LP   + LL VP+P+GGV+V+S NAI Y  QS     A+N FA   VD     S +L  +S    LD A   +L P   +LS + G+ L   LV        + V  L ++   A  LT   A  G  N + F GSRLGDS L+ ++
Sbjct:  277 IWSAINLPHDAYKLLAVPSPIGGVLVVSANAIHYHSQSASCALALNHFAVP-VD----ISQELPRSSFSVELDAANATWLLPDVAMLSTKTGELLLLTLVYDG-----RVVQRLELSKSRASVLTSGIATVG--NSFFFLGSRLGDSMLVQYT 417          
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Match: F6HAK2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=F6HAK2_VITVI)

HSP 1 Score: 71.2 bits (173), Expect = 2.620e-11
Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   11 VWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTRACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLRNGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFHGSRLGDSFLLSWSDPAS 167
            +WS+  LP   + LLPVP+P+GGVVV+S N+I Y  QS     A+N +A +  +S      ++  +S    LD A   +L+    +LS + G+ L   L+T +  G  + V  L ++   A  LT   A  G  N   F GSRLGDS L+ ++   S
Sbjct:  298 IWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQ-----EMPRSSFSVELDAANATWLSNDVAMLSTKTGELL---LLTLAYDG--RVVHRLDLSKSRASVLTSGIAAIG--NSLFFLGSRLGDSLLVQFTSILS 442          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125559.5168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2UL12_SALR52.600e-1336.94Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A4V1IVT9_9FUNG1.200e-1233.94CPSF A subunit region-domain-containing protein n=... [more]
A0A8J4PUB6_9MYCE1.650e-1236.94CPSF_A domain-containing protein n=1 Tax=Polysphon... [more]
A0A397HFG4_9GLOM1.650e-1235.95Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
D7G8W8_ECTSI1.680e-1229.68Cleavage and polyadenylation specificity factor CG... [more]
A0A397U2H9_9GLOM3.050e-1234.52CPSF A subunit region-domain-containing protein n=... [more]
A0A7J7MMM3_9MAGN3.050e-1237.25Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A833RH79_9POAL4.140e-1235.03Cleavage and polyadenylation specificity factor su... [more]
A0A200QB66_9MAGN7.670e-1237.25Cleavage/polyadenylation specificity factor n=1 Ta... [more]
F6HAK2_VITVI2.620e-1135.03Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..167
e-value: 1.1E-16
score: 62.4
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 9..163
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 9..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125559contigM-pyrifera_M_contig125559:13..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125559.5168.1mRNA_M-pyrifera_M_contig125559.5168.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125559 13..513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125559.5168.1 ID=prot_M-pyrifera_M_contig125559.5168.1|Name=mRNA_M-pyrifera_M_contig125559.5168.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
IDLARQSLTRVWSSDTLPSSTHTLLPVPAPVGGVVVLSDNAIFYLDQSTR
ACAAVNGFAAATVDSTTTASLDLSTASLRRTLDGARGHFLTPTSLLLSLR
NGDALHTQLVTSSSSGPSQQVIGLRITPLHAYTLTPPCALTGTRNRWIFH
GSRLGDSFLLSWSDPAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf