prot_M-pyrifera_M_contig12555.5163.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12555.5163.1
Unique Nameprot_M-pyrifera_M_contig12555.5163.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length219
Homology
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BLAST of mRNA_M-pyrifera_M_contig12555.5163.1 vs. uniprot
Match: A0A6H5KQ23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ23_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.690e-36
Identity = 120/225 (53.33%), Postives = 136/225 (60.44%), Query Frame = 0 
Query:    3 IFKRRSSKDLSARIGYDLNPKKYEGGIPTSGASPST-----SMAPVSNITT-GGPSHQKQASSS--SILSYRKTSAPSPHGMGGGGVDDISYGGTPLAAGPSPLSSFKQSLPPTMSTKSLGQGPALCDAPPRXXXXXXXXXXXGSPSKQQIEPPAKSLVIGEGVLFEGTTEGCAAAVVGGKLRGTVKSRRLEVTRAGRMEGTAFAETAEIAGTFEGSLTVTKALK 219
            +F+RRSSK+LSA+IGYD    K       S  S ST     ++APV++I   GG  H KQ S S  S  S + T  PSP    G  VD  +         PSPL++ K  LPP                   XXXXXXXXXXX        EPP+ SLVIGEGVLFEG TEGCAAAVVGGKL GTVKS+RLEVTRAG+MEGTA  E AEIAG FEG+LTVTKALK
Sbjct:    1 MFRRRSSKELSAKIGYDHVNGKASKNTSVSSMSSSTPAASNAVAPVASIPPPGGHLHHKQGSCSPGSSSSRKTTGMPSPEADSG--VDPSA------TERPSPLAALKP-LPPAEXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXVAEPPSNSLVIGEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKMEGTAVVEMAEIAGAFEGNLTVTKALK 214
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12555.5163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQ23_9PHAE2.690e-3653.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 153..218
e-value: 1.9E-9
score: 37.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12555contigM-pyrifera_M_contig12555:4369..5082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12555.5163.1mRNA_M-pyrifera_M_contig12555.5163.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12555 4369..5082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12555.5163.1 ID=prot_M-pyrifera_M_contig12555.5163.1|Name=mRNA_M-pyrifera_M_contig12555.5163.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp
MSIFKRRSSKDLSARIGYDLNPKKYEGGIPTSGASPSTSMAPVSNITTGG
PSHQKQASSSSILSYRKTSAPSPHGMGGGGVDDISYGGTPLAAGPSPLSS
FKQSLPPTMSTKSLGQGPALCDAPPRRRSSSSSSSTSGSPSKQQIEPPAK
SLVIGEGVLFEGTTEGCAAAVVGGKLRGTVKSRRLEVTRAGRMEGTAFAE
TAEIAGTFEGSLTVTKALK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B