prot_M-pyrifera_M_contig125487.5143.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig125487.5143.1
Unique Name	prot_M-pyrifera_M_contig125487.5143.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	151

Homology

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BLAST of mRNA_M-pyrifera_M_contig125487.5143.1 vs. uniprot
Match: S7Z5A1_PENO1 (Rav1p_C domain-containing protein n=1 Tax=Penicillium oxalicum (strain 114-2 / CGMCC 5302) TaxID=933388 RepID=S7Z5A1_PENO1)

HSP 1 Score: 70.5 bits (171), Expect = 2.970e-11
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 0

Query:    1 AYTTEDSVVILTQQFATQQVLALAPGEKAVALAWNEATGALAVAIGTFAVLFTCEISHGK-LQWTRGKAVNAE---EAVECLCWSEARNELLICGESIALWFIPFSMLSENPILKWRTPGVSPISFCTFSPDGKFFATAGANDRYPKVWRPL 148
            AY +  ++VIL+      Q + +   +K  A+A++EA+G +AV  G    ++      G+ L+W+      A+   E++  L W    NELL     +ALW     ML++ P L W+    +P+    FSPDG    T G  DR  KVWR L
Sbjct:   28 AYISGHALVILSGPQTLLQTIYVDDTDKLEAVAFDEASGKIAVCGGPDIFVYQPYGIKGETLKWSLASTFRAQDEKESIHTLSWGSP-NELLAGNSRLALW-----MLNDTPRLVWKRKLATPVKLAQFSPDGALVVTVGQYDRLVKVWRRL 173

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BLAST of mRNA_M-pyrifera_M_contig125487.5143.1 vs. uniprot
Match: A0A0F7VF81_PENBI (Putative WD repeat protein n=3 Tax=Penicillium TaxID=5073 RepID=A0A0F7VF81_PENBI)

HSP 1 Score: 70.1 bits (170), Expect = 4.050e-11
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0

Query:    1 AYTTEDSVVILTQQFATQQVLALAPGEKAVALAWNEATGALAVAIGTFAVLFTCEISHGK-LQWTRG---KAVNAEEAVECLCWSEARNELLICGESIALWFIPFSMLSENPILKWRTPGVSPISFCTFSPDGKFFATAGANDRYPKVWRPL 148
            AY +  ++VIL       Q + +   EK  A+A++EA+G +AV  G    ++      G+ L+W+     +A + +E++  + W    NELL+    +ALW     ML++ P L W+     P+ F  FSPD     T G  DR  KVWR L
Sbjct:   28 AYISGHALVILGGPQTLLQTIYVDDTEKLEAVAFDEASGKIAVCGGPDIFVYQPYGIQGETLKWSLACTFRANDDDESIHTVSWGSP-NELLVGNSRLALW-----MLNDTPRLVWKKKLAHPVKFAQFSPDAALVVTVGEYDRLVKVWRRL 173

[Close]

BLAST of mRNA_M-pyrifera_M_contig125487.5143.1 vs. uniprot
Match: A0A1V6PP00_PENDC (Rav1p_C domain-containing protein n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6PP00_PENDC)

HSP 1 Score: 68.6 bits (166), Expect = 1.390e-10
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 0

Query:    1 AYTTEDSVVILTQQFATQQVLALAPGEKAVALAWNEATGALAVAIGTFAVLFTCEISHGK-LQWT---RGKAVNAEEAVECLCWSEARNELLICGESIALWFIPFSMLSENPILKWRTPGVSPISFCTFSPDGKFFATAGANDRYPKVWRPL 148
            AY +  ++VIL       Q + +   E   A+A++EA+G +AV  G    ++      G+ L+W+     +A + +E +  L W    NELL+    +ALWFI      + P L W+    SP+ F  FSPD     T G  DR  KVWR L
Sbjct:   28 AYISGHALVILGGPQTLLQTVYVDDTENLEAVAFDEASGKIAVCGGPDIFVYQPYGIQGETLKWSLVHTFRADDDDEPIYTLSWGST-NELLVGNSRLALWFI-----YDEPRLVWKQKLASPVQFAQFSPDSALIVTVGHYDRLAKVWRRL 173

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig125487.5143.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig125487.5143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
S7Z5A1_PENO1	2.970e-11	32.24	Rav1p_C domain-containing protein n=1 Tax=Penicill...	[more]
A0A0F7VF81_PENBI	4.050e-11	32.24	Putative WD repeat protein n=3 Tax=Penicillium Tax...	[more]
A0A1V6PP00_PENDC	1.390e-10	32.89	Rav1p_C domain-containing protein n=1 Tax=Penicill...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 12..148 e-value: 1.7E-7 score: 32.4
None	No IPR available	PANTHER	PTHR13950	RABCONNECTIN-RELATED	coord: 1..147
None	No IPR available	PANTHER	PTHR13950:SF9	RABCONNECTIN-3A	coord: 1..147
None	No IPR available	TMHMM	TMhelix		coord: 30..52
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 25..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig125487	contig	M-pyrifera_M_contig125487:7..507 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig125487.5143.1	mRNA_M-pyrifera_M_contig125487.5143.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig125487 7..507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig125487.5143.1 ID=prot_M-pyrifera_M_contig125487.5143.1|Name=mRNA_M-pyrifera_M_contig125487.5143.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
AYTTEDSVVILTQQFATQQVLALAPGEKAVALAWNEATGALAVAIGTFAV
LFTCEISHGKLQWTRGKAVNAEEAVECLCWSEARNELLICGESIALWFIP
FSMLSENPILKWRTPGVSPISFCTFSPDGKFFATAGANDRYPKVWRPLFT
A

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf