mRNA_M-pyrifera_M_contig125468.5137.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A7C6A6C9_9BACT (Hydrogenase formation protein HypD n=1 Tax=Candidatus Solibacter sp. TaxID=2068625 RepID=A0A7C6A6C9_9BACT) HSP 1 Score: 102 bits (254), Expect = 8.000e-23 Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFME-SGIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQHRHS 498
I CSF ++L SQ S LL AK+ GAD+R++Y+ DA+ LA+ +P++++I A GFE A + G +N +VLV H L++ G QGL+ P +G Y L +H++PI++ G+EP+DILQ LL+LV Q+ AE+ Q+R S
Sbjct: 85 IFCSFGDMLRVPGSQCS-LLEAKARGADVRVVYSPLDALKLARANPTREVILFAVGFETTAPAAAMAVWQAAREGLSNFSVLVAHVLVPPAIEAILSSPDGRIQGLLAPGHVCTVTGYQPYEELARRHRVPIVVTGFEPLDILQGLLMLVNQLEEGRAEVENQYRRS 250
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A3N5LFV3_9BACT (Hydrogenase formation protein HypD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5LFV3_9BACT) HSP 1 Score: 100 bits (250), Expect = 2.780e-22 Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFME-SGIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQHRHS 498
I CSF ++L + + DLL+AK+AGAD+RI+Y+ DAV LAK HP KQ+++LA GFE A ++ G +N VLV H L A + G + G +Y + Q+++PI++ G+EP+DILQ + + V+Q+ AE+ Q+ S
Sbjct: 85 IFCSFGDML-RVPGSSGDLLSAKAAGADVRIVYSPLDAVKLAKSHPDKQVVFLAVGFETTAPANALAVEQASRMGLDNFTVLVSHVLVPPAIEAILQAPENQVNGFLAAGHVCAVMGCEEYEPIAAQYRVPIVVTGFEPLDILQGIYMCVKQLEEGRAEVENQYARS 250
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A1J5S0V0_9ZZZZ (Hydrogenase expression/formation protein HypD n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5S0V0_9ZZZZ) HSP 1 Score: 99.8 bits (247), Expect = 7.920e-22 Identity = 58/163 (35.58%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFMES-GIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQ 486
I CS+ + L S L+ AK+ G DIRI+Y+ DA+ LA+ +P +++++LA GFE TA ++L E+ G N +VL H A + + G + P G A Y ++ P++IAG+EP+D+LQS+L+LVRQVN +A + Q
Sbjct: 86 ILCSYADTLRVPASGQLSLIKAKAQGGDIRIVYSTADALQLARENPGREVVFLAIGFETTTPPTAVAVKLAEAEGLKNFSVLCNH-VLTPAAMHAILSGGAELDGFVGPAHVSAVIGAAPYEVFASDYRKPVVIAGFEPLDVLQSILMLVRQVNAGAARVENQ 247
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A850S6H8_9PROT (Hydrogenase maturation factor n=1 Tax=Mariprofundus sp. NF TaxID=2608716 RepID=A0A850S6H8_9PROT) HSP 1 Score: 99.0 bits (245), Expect = 1.600e-21 Identity = 54/164 (32.93%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFMES-GIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQH 489
I C++ +++ + L AK+ GADIR++Y++ D + +A+ P +Q+++ A GFE TA +Q+ E+ G +N +V H LA+ + + G++ P G + Y A H+IPI+IAG+EP+D++QS L+LVRQ+N E+ Q+
Sbjct: 87 ILCTYADLMRVPAGKRDSLHKAKARGADIRMVYSVSDVLAIARDSPEQQVVFFAIGFETTTPPTAVAIQIAEAEGLSNFSVYCNHVQTPPAMEHLLASGEAHINGILGPSHVSTIIGSSAYAACCSHHQIPIVIAGFEPLDVIQSTLMLVRQINEERFEVENQY 250
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A2V9VSC5_9BACT (Hydrogenase formation protein HypD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9VSC5_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 4.000e-21 Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 49 SDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFME-SGIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQH 489
SDLL AK+ GADIRI Y+ +AV +A HP +++++LA GFE A L + G +N ++LV H L + + QG + P G +Y AL +++PI++ G+EP+DILQS+L+LV+Q+ A L Q+
Sbjct: 100 SDLLRAKAHGADIRIAYSPTEAVKIATRHPERKVVFLAIGFETTAPANAMAAYLAKQQGLDNFSMLVSHVLVPPAIRALLTSLENRVQGFIAPGHVCTVMGCEEYEALARDYRVPIVVGGFEPVDILQSVLMLVKQLESGEARLENQY 247
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A6P1AJN9_9CYAN (Hydrogenase formation protein HypD n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P1AJN9_9CYAN) HSP 1 Score: 97.8 bits (242), Expect = 4.040e-21 Identity = 53/167 (31.74%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFME-SGIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQHRHS 498
I CSF ++L S ++DLL K+ G D+RI+Y+ D + +A+ +P K++++ A GFE TA + + G N ++LV H L++ + QG + G +Y A+ Q++IPI++ G+EP+DILQ + L ++Q+ + AE++ Q+ S
Sbjct: 85 IFCSFGDMLRVPGSTSTDLLTVKANGGDVRIVYSPLDTLKIAQENPEKEVVFFAVGFETTAPATAMAVYQAKQQGITNFSMLVSHVLVPPAMAAILSSPQNQVQGFLAAGHVCTVMGYEEYQAIAAQYQIPIIVTGFEPVDILQGVYLCLQQLEQNQAEVVNQYSRS 251
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A6N7B7D2_9PROT (Hydrogenase maturation factor n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A6N7B7D2_9PROT) HSP 1 Score: 97.8 bits (242), Expect = 4.410e-21 Identity = 58/161 (36.02%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNS--QGLMLPVDFMES-GIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAE 474
I CS+ + L S+ LL AK+ GAD+R++Y+ DAV +A +P++Q+++ A GFE TA ++ ++SG N +VL H A E + G QGL+ P G Y ++ + ++PI+I+G+EP+D+LQ++L+L+RQVN AE
Sbjct: 87 ILCSYGDCLRVPASEQMSLLKAKARGADVRMVYSALDAVKIATQNPTRQVVFFAIGFETTTPPTASVIKQAQASGLKNFSVLCNHVLTLP-AMEAILTQPGGVPLQGLVGPAHVSTVIGSQPYQSITSRFRMPIVISGFEPLDLLQAILMLLRQVNEGRAE 246
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: UPI00036373CE (hydrogenase formation protein HypD n=1 Tax=Uliginosibacterium gangwonense TaxID=392736 RepID=UPI00036373CE) HSP 1 Score: 97.4 bits (241), Expect = 5.930e-21 Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNS-QGLMLPVDFMES-GIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAE 474
I CS+ + L S A LL AKS GADIR++Y+ DA+ +A+ +P++++++LA GFE TA ++ ++ G NN ++L H LAA G + G + P G A Y Q+K P++IAG+EP+D++Q++ +LV Q+N AE
Sbjct: 87 ILCSYGDTLRVPASNALSLLKAKSRGADIRMVYSTLDALQVARDNPTREVVFLAIGFETTTPPTAVAIKTAQAQGLNNFSILCNHVLTPAAMHAILAAPNGVALDGFVGPAHVSTVIGSAPYEPFPAQYKKPVVIAGFEPLDVMQAIHMLVLQINEGRAE 246
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A1G1P6A4_9BACT (Hydrogenase formation protein HypD n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15 TaxID=1801861 RepID=A0A1G1P6A4_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 1.520e-20 Identity = 56/167 (33.53%), Postives = 90/167 (53.89%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFME-SGIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQHRHS 498
I CSF ++L + A DLLA K+ GAD+RI+Y+ DA+ +A+ P +Q+++ A GFE TA + G N ++LV H LA+ + QG + G +Y + +++PI++ G+EP+DILQ +L+ VRQ+ AE+ Q+ S
Sbjct: 85 IFCSFGDML-RVPGAAGDLLAVKARGADVRIVYSPLDALRIARAEPDRQVVFFAVGFETTAPATAMAVSQAAQQGIENFSLLVSHMVVPPAMEAILASPENRVQGFLAAGHVCTVMGYTEYEPIARTYRVPIVVTGFEPLDILQGVLMCVRQLERGRAEVENQYTRS 250
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Match: A0A850S0J1_9PROT (Hydrogenase maturation factor n=1 Tax=Mariprofundus sp. KV TaxID=2608715 RepID=A0A850S0J1_9PROT) HSP 1 Score: 96.3 bits (238), Expect = 1.580e-20 Identity = 54/164 (32.93%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 1 ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIIYLATGFEGEMVETAKCLQLLESSGRNNLAVLVQHRTAFNVACEYLAANKGNSQGLMLPVDFMES-GIAQYHALQMQHKIPILIAGYEPIDILQSLLLLVRQVNLHSAELIEQH 489
I C++ +++ + L AK+ GADIR++Y++ DA+ +A+ +P +Q+++ A GFE TA +Q+ ++ G N V H LA+ + + G++ P G Y H IPI+IAG+EP+D++QS LLLVRQ+N E+ Q+
Sbjct: 87 ILCTYADLMRVPAGKRDSLHRAKARGADIRMVYSVNDALAIARNNPEQQVVFFAIGFETTTPPTAVAIQIAQAEGLKNFLVYCNHVQTPPAMSHLLASGEVSINGILGPSHVSTIIGSDAYADCCNNHHIPIVIAGFEPLDVMQSTLLLVRQINAGRCEVENQY 250 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125468.5137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125468.5137.1 >prot_M-pyrifera_M_contig125468.5137.1 ID=prot_M-pyrifera_M_contig125468.5137.1|Name=mRNA_M-pyrifera_M_contig125468.5137.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp ICCSFPEILVQNTSQASDLLAAKSAGADIRIIYNIEDAVNLAKLHPSKQIback to top mRNA from alignment at M-pyrifera_M_contig125468:2..499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125468.5137.1 ID=mRNA_M-pyrifera_M_contig125468.5137.1|Name=mRNA_M-pyrifera_M_contig125468.5137.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig125468:2..499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125468:2..499+ >mRNA_M-pyrifera_M_contig125468.5137.1 ID=mRNA_M-pyrifera_M_contig125468.5137.1|Name=mRNA_M-pyrifera_M_contig125468.5137.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig125468:2..499+ (Macrocystis pyrifera P11B4 male)back to top |