mRNA_M-pyrifera_M_contig12534.5129.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.280e-53 Identity = 110/216 (50.93%), Postives = 133/216 (61.57%), Query Frame = 3
Query: 114 KVAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPL--GGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNSG-ELHSESKKANASSHSCRQLMVKGG-----LQHVPEYMLLKEELLDEDSRFTDPYRTTFLSPRCGCL 737
KVAA+DAANTRAL L+AL H S+IG Y T +AAGAGE TC + C R KP+ GGVS +RA +LG TF +A+ RMHNT+H I P A +G Y RK RSD TNP V+ L FW+SD+VS +GNSG +++ ESKK +A SH RQLM KG Y+ LK LL++DS FTDP RTTFLS RCGCL
Sbjct: 165 KVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQR---CKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCL 377
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5K647_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.510e-52 Identity = 108/211 (51.18%), Postives = 128/211 (60.66%), Query Frame = 3
Query: 114 KVAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNSGELHSESKKANASSHSCRQLMVKGG-----LQHVPEYMLLKEELLDEDSRFTDPYRTTFLSPRCG 731
K AAV+AANTRAL L+AL HS S+IG AYTT AAGAGE TC N C R A+P GGVS +RA++LG TF +A+ RMHNT+H I P A+ DG Y RK RSD TNP V+ L FW+SD+VS ++ ESKK +A SH RQLM KG Y+ LK LL++DS FTDP RTTFLS RCG
Sbjct: 107 KEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEP-GGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRAKN----MYKESKKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCG 312
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 189 bits (479), Expect = 2.570e-51 Identity = 110/216 (50.93%), Postives = 133/216 (61.57%), Query Frame = 3
Query: 114 KVAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPL--GGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNSG-ELHSESKKANASSHSCRQLMVKGG-----LQHVPEYMLLKEELLDEDSRFTDPYRTTFLSPRCGCL 737
KVAA+DAANTRAL L+AL H S+IG Y T +AAGAGE TC + C R KP+ GGVS +RA +LG TF +A+ RMHNT+H I P A +G Y RK RSD TNP V+ L FW+SD+VS +GNSG +++ ESKK +A SH RQLM KG Y+ LK LL++DS FTDP RTTFLS RCGCL
Sbjct: 165 KVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQR---CKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCL 377
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.550e-49 Identity = 113/223 (50.67%), Postives = 132/223 (59.19%), Query Frame = 3
Query: 90 GSVGRRGGKVAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNSGE--LHSESKKANASSHSCRQLMVKGG-LQHV----PEYMLLKEELLDEDSRFTDPYRTTFLSPRCGCL 737
G +G AAVDA NTRAL + AL HS SNIGR AY T AAGA + TCD +P G VS T RA++LG TFR A+ RMH TDH+IPP +AL GRY A RK RSD + RV+ L RFW+SD++S SG+SG + SKKA H RQLMV G + H PEY+ LK ELL ED+ FTDP RT FLS RCGCL
Sbjct: 168 GELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCL 389
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 182 bits (462), Expect = 6.890e-49 Identity = 113/223 (50.67%), Postives = 132/223 (59.19%), Query Frame = 3
Query: 90 GSVGRRGGKVAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNSGE--LHSESKKANASSHSCRQLMVKGG-LQHV----PEYMLLKEELLDEDSRFTDPYRTTFLSPRCGCL 737
G +G AAVDA NTRAL + AL HS SNIGR AY T AAGA + TCD +P G VS T RA++LG TFR A+ RMH TDH+IPP +AL GRY A RK RSD + RV+ L RFW+SD++S SG+SG + SKKA H RQLMV G + H PEY+ LK ELL ED+ FTDP RT FLS RCGCL
Sbjct: 792 GELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCL 1013
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5JNM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM5_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.520e-45 Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 3
Query: 117 VAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNS 551
VAAV NTRA+A L L +S+SNIGR+AYT AGAGE TC +PC+ A+RY A+P GVS QRAE+LG TFR A RMH+T+H+IPPPQAL +GRYC RK RSDA + R+L L RFW+SD+VS SG+S
Sbjct: 24 VAAVHTENTRAMAASLGTLQGNSKSNIGRVAYTIVLAAVAGAGEHTCSPTDPCNPAERYPPAEPQSGVSFAQRAESLGVREKTFRAAHVRMHHTNHTIPPPQALEEGRYCWTRRKTRSDAADERMLELAIRFWHSDDVSRASGDS 168
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5J5R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5R2_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.070e-43 Identity = 83/145 (57.24%), Postives = 96/145 (66.21%), Query Frame = 3
Query: 117 VAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNS 551
VAA A NTRA+A L AL SQSNIGR+AYTT AGAGE TC +P +P GGVS QRAE+LG TFR A RMH+TDH+IPPPQAL +GRYC +RK RSDAT+ RVL L RFW+ D+VS SG+S
Sbjct: 24 VAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAYVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLELAIRFWHCDDVSRASGDS 168
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5KLZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ5_9PHAE) HSP 1 Score: 155 bits (391), Expect = 8.940e-43 Identity = 83/145 (57.24%), Postives = 96/145 (66.21%), Query Frame = 3
Query: 117 VAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNS 551
VAAV A NTR +A L AL SQSNIGR+AYTT AGAGE TC +P +P GGVS QRAE+LG TFR A RMH+TDH+IPPPQAL +GRYC +RK RSDAT+ RVL L RFW+ D+VS SG+S
Sbjct: 110 VAAVHAENTRTMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLELAIRFWHCDDVSRASGDS 254
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5K614_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K614_9PHAE) HSP 1 Score: 153 bits (386), Expect = 4.490e-42 Identity = 82/145 (56.55%), Postives = 95/145 (65.52%), Query Frame = 3
Query: 117 VAAVDAANTRALATLLRALHPHSQSNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRYC*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVSGNS 551
VAA A NTRA+A L AL SQSNIGR+AYTT AGAGE TC +P +P GGVS QRAE+LG TFR A RMH+TDH+IPPPQAL +GRYC +RK RSDAT+ VL L RFW+ D+VS SG+S
Sbjct: 54 VAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDEHVLELAIRFWHCDDVSRASGDS 198
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Match: A0A6H5JDV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDV5_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.260e-33 Identity = 66/119 (55.46%), Postives = 78/119 (65.55%), Query Frame = 3
Query: 189 SNIGRIAYTTGFTIAAGAGEPTCDSANPCDSADRYVAAKPLGGVSPTQRAENLGNNINTFREAQERMHNTDHSIPPPQALMDGRY-C*ASRKVRSDATNPRVLNLGTRFWYSDNVSYVS 542
+NIGR+AYTT AGAGE TC +P +P GGVS QRAE+LG TFR A RMH+TDH+IPPPQAL +GRY C +RK RSDAT+ RVL L RFW+ D+VS S
Sbjct: 4 TNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYYCWTTRKTRSDATDERVLELAIRFWHCDDVSRAS 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12534.5129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12534.5129.1 >prot_M-pyrifera_M_contig12534.5129.1 ID=prot_M-pyrifera_M_contig12534.5129.1|Name=mRNA_M-pyrifera_M_contig12534.5129.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=42bp MVKGGLQHVPEYMLLKEELLDEDSRFTDPYRTTFLSPRCGCLback to top mRNA from alignment at M-pyrifera_M_contig12534:1761..2719- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12534.5129.1 ID=mRNA_M-pyrifera_M_contig12534.5129.1|Name=mRNA_M-pyrifera_M_contig12534.5129.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=959bp|location=Sequence derived from alignment at M-pyrifera_M_contig12534:1761..2719- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12534:1761..2719- >mRNA_M-pyrifera_M_contig12534.5129.1 ID=mRNA_M-pyrifera_M_contig12534.5129.1|Name=mRNA_M-pyrifera_M_contig12534.5129.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig12534:1761..2719- (Macrocystis pyrifera P11B4 male)back to top |